Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0383
(684 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 337 7e-94
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 337 7e-94
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 148 9e-37
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 116 2e-27
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 65 1e-11
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 50 4e-07
SPAC1F7.12 |yak3|yakC, SPAC21E11.01|aldose reductase YakC|Schizo... 30 0.27
SPAC22H12.02 |tfg3|taf14|transcription factor TFIIF complex subu... 29 0.63
SPBC947.04 |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Manual 29 0.63
SPAC24H6.13 |||DUF221 family protein|Schizosaccharomyces pombe|c... 29 0.63
SPAC21E11.06 |tif224||translation initiation factor eIF2B delta ... 28 1.4
SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase Cdc48|Schizosac... 28 1.4
SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces p... 27 1.9
SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 27 3.3
SPACUNK4.08 |||dipeptidyl aminopeptidase |Schizosaccharomyces po... 27 3.3
SPBC32F12.09 |rum1||CDK inhibitor Rum1|Schizosaccharomyces pombe... 27 3.3
SPBC36.07 |iki3||RNA polymerase II elongator subunit Iki3 |Schiz... 26 4.4
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 4.4
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 26 4.4
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 26 4.4
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 5.8
SPBP23A10.13 |orc4|orp4|origin recognition complex subunit Orc4|... 26 5.8
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 26 5.8
SPAC23E2.03c |ste7||meiotic suppressor protein Ste7|Schizosaccha... 25 7.7
SPAC1D4.09c |||DUF602 family protein|Schizosaccharomyces pombe|c... 25 7.7
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 337 bits (829), Expect = 7e-94
Identities = 161/226 (71%), Positives = 186/226 (82%)
Frame = +1
Query: 7 GTLCEAIEDVPSGNICGLVGVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVRVAVEPKNP 186
G+ E IED P+GNI GLVGVDQFLVK+GT+TT + AHNMKVMKFSVSPVV+VAVE KN
Sbjct: 439 GSRIEPIEDCPAGNIIGLVGVDQFLVKSGTLTTSEVAHNMKVMKFSVSPVVQVAVEVKNG 498
Query: 187 ADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSD 366
DLPKLVEGLKRL+KSDP V C ESGEHIVAGAGELHLEICLKDL+EDHA IP+K S
Sbjct: 499 NDLPKLVEGLKRLSKSDPCVLCTTSESGEHIVAGAGELHLEICLKDLQEDHAGIPLKISP 558
Query: 367 PVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARY 546
PVVSYRE+V+E S LSKSPNKHNR+FM A+PM + L I+ G VNPRDDFK RAR
Sbjct: 559 PVVSYRESVSEPSSMTALSKSPNKHNRIFMTAEPMSEELSVAIETGHVNPRDDFKVRARI 618
Query: 547 LTEKYEYDVTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKDSVV 684
+ +++ +DVT+ARKIWCFGP+ TG N++VD +K V YLNEIKDSVV
Sbjct: 619 MADEFGWDVTDARKIWCFGPDTTGANVVVDQTKAVAYLNEIKDSVV 664
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 337 bits (829), Expect = 7e-94
Identities = 161/226 (71%), Positives = 186/226 (82%)
Frame = +1
Query: 7 GTLCEAIEDVPSGNICGLVGVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVRVAVEPKNP 186
G+ E IED P+GNI GLVGVDQFLVK+GT+TT + AHNMKVMKFSVSPVV+VAVE KN
Sbjct: 439 GSRIEPIEDCPAGNIIGLVGVDQFLVKSGTLTTSEVAHNMKVMKFSVSPVVQVAVEVKNG 498
Query: 187 ADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSD 366
DLPKLVEGLKRL+KSDP V C ESGEHIVAGAGELHLEICLKDL+EDHA IP+K S
Sbjct: 499 NDLPKLVEGLKRLSKSDPCVLCTTSESGEHIVAGAGELHLEICLKDLQEDHAGIPLKISP 558
Query: 367 PVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARY 546
PVVSYRE+V+E S LSKSPNKHNR+FM A+PM + L I+ G VNPRDDFK RAR
Sbjct: 559 PVVSYRESVSEPSSMTALSKSPNKHNRIFMTAEPMSEELSVAIETGHVNPRDDFKVRARI 618
Query: 547 LTEKYEYDVTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKDSVV 684
+ +++ +DVT+ARKIWCFGP+ TG N++VD +K V YLNEIKDSVV
Sbjct: 619 MADEFGWDVTDARKIWCFGPDTTGANVVVDQTKAVAYLNEIKDSVV 664
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 148 bits (358), Expect = 9e-37
Identities = 78/222 (35%), Positives = 124/222 (55%), Gaps = 3/222 (1%)
Frame = +1
Query: 25 IEDVPSGNICGLVGVDQFLVKTGTITTFK---NAHNMKVMKFSVSPVVRVAVEPKNPADL 195
++ +G + L GVD + KT TI + + + + + V +VAVEP NP++L
Sbjct: 554 VDGAVAGMLVLLGGVDNSISKTATIVSDNLKDDPYIFRPIAHMSESVFKVAVEPHNPSEL 613
Query: 196 PKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVV 375
PKL++GL++ KS P+ EESGEH + G GE++++ L DL ++ I I+ SDPV
Sbjct: 614 PKLLDGLRKTNKSYPLSITKVEESGEHTIFGTGEMYMDCLLYDLRTLYSEIEIRVSDPVA 673
Query: 376 SYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTE 555
+ ET + S C S +PNK NR+ M +P+ G+ DI+ G+VN K + + +
Sbjct: 674 RFCETAVDTSSIKCFSDTPNKKNRITMVVEPLEKGISNDIENGKVNINWPQKRISEFFQK 733
Query: 556 KYEYDVTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKDSV 681
Y++D+ +R IW FGP+ G NIL D + + +SV
Sbjct: 734 NYDWDLLASRSIWAFGPDDRGTNILRDDTLSTDVDKNVLNSV 775
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 116 bits (280), Expect = 2e-27
Identities = 58/134 (43%), Positives = 84/134 (62%)
Frame = +1
Query: 25 IEDVPSGNICGLVGVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVRVAVEPKNPADLPKL 204
+E VP+GN+ + G+ +++T T+ + N N+ + + P+VRVA+EP P ++ KL
Sbjct: 520 LETVPAGNVFAIGGLAGTVLRTATLCSSPNGPNLVGVTQQMEPIVRVALEPVRPFEMNKL 579
Query: 205 VEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYR 384
V GL L ++DP VQ EE+GEH++ AGE+HLE CLKDL E A I I+ S P+V YR
Sbjct: 580 VTGLDMLNQADPCVQIAVEENGEHVIMCAGEIHLERCLKDLRERFAKIEIQASQPLVPYR 639
Query: 385 ETVAEESDQLCLSK 426
ET D L +K
Sbjct: 640 ETTIATPDLLAKNK 653
Score = 27.5 bits (58), Expect = 1.9
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Frame = +1
Query: 520 DDFKTRARYLTEKYEYDVTEARK----IWCFGPEGTGPNILVDCSK 645
+ F R L E+ D+ E + I FGP+ GPNIL D +K
Sbjct: 724 EKFYERLSKLLEEENSDLGELKNHLDSIIAFGPKRVGPNILFDKTK 769
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 64.9 bits (151), Expect = 1e-11
Identities = 39/129 (30%), Positives = 71/129 (55%), Gaps = 1/129 (0%)
Frame = +1
Query: 19 EAIEDVPSGNICGLVGVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVRVAVEPKNPADLP 198
E IE V +G IC L G++ T T ++ M M F PV+ ++++PK+ D
Sbjct: 433 EEIEKVEAGGICALFGIE--CASGDTFTDGSVSYTMTSM-FVPEPVISLSLKPKSK-DTT 488
Query: 199 KLVEGLKRLAKSDPMVQC-INEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVV 375
+ L R + DP + ++ ES E I++G GELHLE+ ++ + ++ + + P V
Sbjct: 489 SFSKALNRFQREDPTFRVQLDNESKETIISGMGELHLEVYVERMRREYK-VDCETGKPRV 547
Query: 376 SYRETVAEE 402
++RET++++
Sbjct: 548 AFRETLSKK 556
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 49.6 bits (113), Expect = 4e-07
Identities = 41/151 (27%), Positives = 68/151 (45%), Gaps = 9/151 (5%)
Frame = +1
Query: 19 EAIEDVPSGNICGLVGVDQFLVKTGTIT----TFKNAHNMKVMKFSV----SPVVRVAVE 174
+ ++ + +GNI + G+ QF TG I KN H SV PV ++E
Sbjct: 393 QEVDCISAGNIGVISGIKQF--HTGDIIINKENSKNFHEYLSGNQSVISIPEPVCIASIE 450
Query: 175 PKNPADLPKLVEGLKRLAKSDPMVQCINE-ESGEHIVAGAGELHLEICLKDLEEDHACIP 351
P + D P L+E L + + DP + + E+G+ ++ G G +HL++ + L +
Sbjct: 451 PYSLKDEPALLEALANMNREDPSFRYTQDLENGQLLIQGMGIMHLQVSYERLVSEFGA-R 509
Query: 352 IKKSDPVVSYRETVAEESDQLCLSKSPNKHN 444
V YRET+ + S + NK N
Sbjct: 510 ASLGKVQVGYRETLIDVSFNSVTLSTENKEN 540
>SPAC1F7.12 |yak3|yakC, SPAC21E11.01|aldose reductase
YakC|Schizosaccharomyces pombe|chr 1|||Manual
Length = 340
Score = 30.3 bits (65), Expect = 0.27
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +1
Query: 316 LKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMP 474
+K LEE+ + +K SD V + ++ + P +++FM PMP
Sbjct: 287 VKYLEENFGALKVKLSDATVKEIREACDNAEVIGARYPPGAGSKIFMDTPPMP 339
>SPAC22H12.02 |tfg3|taf14|transcription factor TFIIF complex subunit
Tfg3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 241
Score = 29.1 bits (62), Expect = 0.63
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 6/49 (12%)
Frame = +1
Query: 184 PADLPKLVEGLKRLAKSD--PMVQCINEESGEHIVA----GAGELHLEI 312
P D+ KL EGL++L + D +VQ +NE + GE H+++
Sbjct: 172 PVDMDKLAEGLQKLQEDDLLQVVQMVNENKTPDMYVRNDIEGGEFHIDL 220
>SPBC947.04 |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 973
Score = 29.1 bits (62), Expect = 0.63
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = -2
Query: 401 SSATVSRYDTTGSDFLIGMQAWSSSRSLRQISRWSSPAPATMCSPDSSLIHCTMGS 234
S T YDTTG+D ++ SS R WS+ P +P ++ I+ T GS
Sbjct: 117 SDYTSVYYDTTGTDDVVYEYHPSSERHKSTNDTWSTNLPT---NPTTTAIYSTSGS 169
>SPAC24H6.13 |||DUF221 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 871
Score = 29.1 bits (62), Expect = 0.63
Identities = 22/76 (28%), Positives = 37/76 (48%)
Frame = +1
Query: 256 NEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPN 435
+EE+ + A E C++DL++ + K+SD Y T+ ++KS
Sbjct: 198 DEETLHELFPNASEF---TCVRDLKKLEKKVK-KRSDLGNKYESTLNS-----LINKSVK 248
Query: 436 KHNRLFMKAQPMPDGL 483
KHN+L K +P+P L
Sbjct: 249 KHNKLVKKHKPLPSTL 264
>SPAC21E11.06 |tif224||translation initiation factor eIF2B delta
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 467
Score = 27.9 bits (59), Expect = 1.4
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +1
Query: 61 VGVDQFLVKTGTITTFKNAHNMKV--MKFSVSP 153
+GVD F K G + +K+ N+K+ +K+ V+P
Sbjct: 404 MGVDDFEEKPGVLANWKSVKNLKLLSLKYDVTP 436
>SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase
Cdc48|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 27.9 bits (59), Expect = 1.4
Identities = 25/135 (18%), Positives = 55/135 (40%), Gaps = 3/135 (2%)
Frame = +1
Query: 235 DPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQL 414
D ++ I E+ ++ + L E ++ + E I + + + +++ D
Sbjct: 413 DVDLEQIAAETHGYVGSDLASLCSEAAMQQIREKMDMIDLDEDEIDAEVLDSLGVTMDNF 472
Query: 415 CLSKSPNKHNRLFMKAQPMPDGLPEDI---DEGRVNPRDDFKTRARYLTEKYEYDVTEAR 585
+ + + L +P+ EDI +E + R+ + Y + + VT ++
Sbjct: 473 RFALGSSNPSALRETVVEVPNVRWEDIGGLEEVKRELRETVQMPVMYAEKFLRFGVTPSK 532
Query: 586 KIWCFGPEGTGPNIL 630
+ FGP GTG +L
Sbjct: 533 GVLFFGPPGTGKTLL 547
>SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1323
Score = 27.5 bits (58), Expect = 1.9
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 307 EICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNK 438
E+C +LE+D I +S +S + A++ DQL S + +K
Sbjct: 64 ELCNFELEKDSLESMIHESSTALSAQSNTAQDGDQLASSSTISK 107
>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 670
Score = 26.6 bits (56), Expect = 3.3
Identities = 24/92 (26%), Positives = 39/92 (42%), Gaps = 2/92 (2%)
Frame = +1
Query: 301 HLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDG 480
HL++CL D +E+ + K + E S +L LSK + + + M
Sbjct: 475 HLKLCLSDSQEELLQLNAKLEKANIVIDEL---NSAKLKLSKQVEEESSMKDDLTEMNQR 531
Query: 481 LPEDID--EGRVNPRDDFKTRARYLTEKYEYD 570
L E I+ E VN +T + T K +Y+
Sbjct: 532 LKEQIESYENEVNSEITSRTLKEFETLKTQYE 563
>SPACUNK4.08 |||dipeptidyl aminopeptidase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 793
Score = 26.6 bits (56), Expect = 3.3
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 70 DQFLVKTGTITTFKNAHNMKVMKFSVSPVV 159
D FLVK G + ++ +N+ FSVS +V
Sbjct: 82 DTFLVKYGDLINIQDPYNLNKTLFSVSDLV 111
>SPBC32F12.09 |rum1||CDK inhibitor Rum1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 230
Score = 26.6 bits (56), Expect = 3.3
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -1
Query: 609 LGAKAPNLTGFGNIIFVLFCKIPSAS 532
+G PNL GN +F L ++PS+S
Sbjct: 169 IGILPPNLNSIGNKMFSLKSRVPSSS 194
>SPBC36.07 |iki3||RNA polymerase II elongator subunit Iki3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1253
Score = 26.2 bits (55), Expect = 4.4
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 481 LPEDIDEGRVNPRDDFKT 534
LPE IDEG+++ DD KT
Sbjct: 194 LPEKIDEGKLSDVDDGKT 211
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 26.2 bits (55), Expect = 4.4
Identities = 26/116 (22%), Positives = 44/116 (37%)
Frame = -2
Query: 422 ERQSWSDSSATVSRYDTTGSDFLIGMQAWSSSRSLRQISRWSSPAPATMCSPDSSLIHCT 243
++ S S +S T S T S + SSS +L S + ++ SSL H +
Sbjct: 89 QQSSSSSASLTSSSSATLTSSSSASPTSSSSSHALSSSSSSLVASSSSSGMSSSSLSHSS 148
Query: 242 MGSDLARRLRPSTSLGRSAGFLGSTATRTTGDTLNFITFMLWAFLKVVMVPVLTKN 75
+ S+ S + T D + IT + +++ V+ P T N
Sbjct: 149 SVPSSSSSYHSSSMTTSGLSSSASIVSSTYRDGPSIITLVSTSYVSEVVTPTTTNN 204
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 26.2 bits (55), Expect = 4.4
Identities = 26/122 (21%), Positives = 46/122 (37%)
Frame = -2
Query: 407 SDSSATVSRYDTTGSDFLIGMQAWSSSRSLRQISRWSSPAPATMCSPDSSLIHCTMGSDL 228
+ +SAT S ++ + A SSS S S ++ + S +S+ S +
Sbjct: 186 ASNSATSSSLASSSLNSTTSATATSSSLSSTAASNSATSSSLASSSLNSTTSATATSSSI 245
Query: 227 ARRLRPSTSLGRSAGFLGSTATRTTGDTLNFITFMLWAFLKVVMVPVLTKN*STPTRPQM 48
+ + ST L S +T+ T + + T L P+ + N +T T
Sbjct: 246 SSTVSSSTPLTSSNSTTAATSASATSSSAQYNTSSLLPSSTPSSTPLSSANSTTATSASS 305
Query: 47 LP 42
P
Sbjct: 306 TP 307
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 26.2 bits (55), Expect = 4.4
Identities = 10/22 (45%), Positives = 18/22 (81%)
Frame = -1
Query: 483 QTIRHGLSLHEQTVVLVGRL*E 418
+++RH +SL+E+T + +GRL E
Sbjct: 324 ESVRHLISLNEETWIQIGRLAE 345
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 25.8 bits (54), Expect = 5.8
Identities = 31/137 (22%), Positives = 54/137 (39%)
Frame = -2
Query: 413 SWSDSSATVSRYDTTGSDFLIGMQAWSSSRSLRQISRWSSPAPATMCSPDSSLIHCTMGS 234
S S SS+ S T S S+S ++ S SS +T+ S S S
Sbjct: 276 SSSSSSSPTSTSSTISSSSSSSSSPTSTSSTISSSSSSSSSFSSTLSSSSMSSSSSFSSS 335
Query: 233 DLARRLRPSTSLGRSAGFLGSTATRTTGDTLNFITFMLWAFLKVVMVPVLTKN*STPTRP 54
+ S+S + S+ T ++ + +F + + + LT + S+ +RP
Sbjct: 336 PTSSSSTISSSSSSPSSSSFSSTTSSSKSSSSFSSTV--SSSSSTSSSTLTSSSSSSSRP 393
Query: 53 QMLPEGTSSIASHNVPS 3
+SS++SH S
Sbjct: 394 ASSSSHSSSLSSHKSSS 410
>SPBP23A10.13 |orc4|orp4|origin recognition complex subunit
Orc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 972
Score = 25.8 bits (54), Expect = 5.8
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +1
Query: 577 EARKIWCFGPEGTGPNILVD--CSKGVQYLNE 666
E + GP G+G ++LVD S+ Q +NE
Sbjct: 574 EGNSVIIVGPRGSGKSVLVDDILSRAAQEINE 605
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 25.8 bits (54), Expect = 5.8
Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 4/103 (3%)
Frame = -2
Query: 299 SSPAPATMCSPDSSLIHCTMGSD-LARRLRPS---TSLGRSAGFLGSTATRTTGDTLNFI 132
SSP P T S +S T GS L+ + P+ TS ++ + T+T +T + +
Sbjct: 219 SSPLPTTSTSCTTSTSIPTGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPL 278
Query: 131 TFMLWAFLKVVMVPVLTKN*STPTRPQMLPEGTSSIASHNVPS 3
+ +P T N +TP P + P TSS ++ P+
Sbjct: 279 PTTSTSCTTSTSIPP-TGNSTTPVTPTVPPTSTSSTSTPPPPA 320
>SPAC23E2.03c |ste7||meiotic suppressor protein
Ste7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 569
Score = 25.4 bits (53), Expect = 7.7
Identities = 10/33 (30%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Frame = -2
Query: 299 SSPAPATMCSPDSSL--IHCTMGSDLARRLRPS 207
S+ +P+T+CSPD+++ ++ G L ++ P+
Sbjct: 403 SNVSPSTICSPDNNVTFVNLAPGEKLTFKIEPN 435
>SPAC1D4.09c |||DUF602 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 240
Score = 25.4 bits (53), Expect = 7.7
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = +1
Query: 178 KNPADLPKLVEGLKRLAKSDPMVQC-INEES--GEHIVAGAGELHLEICLKDLEEDHACI 348
K P +P L KR KS QC I +E + G G+L+ + + + D + +
Sbjct: 16 KEPGKVPPLDIDFKRSVKSSQFSQCAITDEPLYPPIVSCGLGKLYNKASILQMLLDRSSV 75
Query: 349 PIKKSDPVVSYRETV 393
P K + S ++ V
Sbjct: 76 P-KSPSHIKSLKDVV 89
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.136 0.405
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,963,258
Number of Sequences: 5004
Number of extensions: 63338
Number of successful extensions: 230
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 227
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 315915086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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