Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0383
(684 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 406 e-114
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 400 e-112
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 165 3e-41
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 161 6e-40
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 70 2e-12
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 64 7e-11
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 64 7e-11
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 40 0.002
U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile (un... 33 0.25
Z79603-10|CAI79233.1| 224|Caenorhabditis elegans Hypothetical p... 31 0.58
U41278-3|AAK31512.1| 453|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z95310-1|CAB08561.1| 444|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z82076-6|CAH10809.1| 450|Caenorhabditis elegans Hypothetical pr... 29 2.3
L07144-11|AAM54163.1| 144|Caenorhabditis elegans Hypothetical p... 29 4.1
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 4.1
Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical pr... 28 5.4
AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein. 28 5.4
U70852-8|ABB51182.1| 868|Caenorhabditis elegans Hypothetical pr... 28 7.1
U53344-5|AAA96226.2| 442|Caenorhabditis elegans More of ms prot... 28 7.1
AF209707-1|AAF28335.1| 522|Caenorhabditis elegans phosphoinosit... 28 7.1
AF013489-1|AAC47728.1| 442|Caenorhabditis elegans MOM-1 protein. 28 7.1
AC006708-6|AAF60427.2| 522|Caenorhabditis elegans Phosphoinosit... 28 7.1
Z81462-2|CAB03841.1| 263|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z69788-7|CAM33502.1| 132|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z48583-4|CAN99691.1| 3394|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z48583-3|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical pr... 27 9.4
U64836-6|AAG24056.2| 201|Caenorhabditis elegans Hypothetical pr... 27 9.4
U55364-6|AAA97973.1| 2541|Caenorhabditis elegans Hypothetical pr... 27 9.4
U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death abno... 27 9.4
AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate ada... 27 9.4
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical protein
F25H5.4 protein.
Length = 852
Score = 406 bits (1000), Expect = e-114
Identities = 188/226 (83%), Positives = 205/226 (90%)
Frame = +1
Query: 7 GTLCEAIEDVPSGNICGLVGVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVRVAVEPKNP 186
G E IED+PSGNI GLVGVDQ+LVK GTITT+K+AHNM+VMKFSVSPVVRVAVE KNP
Sbjct: 449 GRFIEPIEDIPSGNIAGLVGVDQYLVKGGTITTYKDAHNMRVMKFSVSPVVRVAVEAKNP 508
Query: 187 ADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSD 366
ADLPKLVEGLKRLAKSDPMVQCI EESGEHI+AGAGELHLEICLKDLEEDHACIP+KKSD
Sbjct: 509 ADLPKLVEGLKRLAKSDPMVQCIFEESGEHIIAGAGELHLEICLKDLEEDHACIPLKKSD 568
Query: 367 PVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARY 546
PVVSYRETV ES+Q+CLSKSPNKHNRL AQPMPDGL +DI+ G VN RD+FK RA+
Sbjct: 569 PVVSYRETVQSESNQICLSKSPNKHNRLHCTAQPMPDGLADDIEGGTVNARDEFKARAKI 628
Query: 547 LTEKYEYDVTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKDSVV 684
L EKYEYDVTEARKIWCFGP+GTGPN+L+D +KGVQYLNEIKDSVV
Sbjct: 629 LAEKYEYDVTEARKIWCFGPDGTGPNLLMDVTKGVQYLNEIKDSVV 674
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 400 bits (986), Expect = e-112
Identities = 186/226 (82%), Positives = 204/226 (90%)
Frame = +1
Query: 7 GTLCEAIEDVPSGNICGLVGVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVRVAVEPKNP 186
G E IED+PSGNI GLVGVDQ+LVK GTITT+K+AHNM+VMKFSVSPVVRVAVE KNP
Sbjct: 449 GRFIEPIEDIPSGNIAGLVGVDQYLVKGGTITTYKDAHNMRVMKFSVSPVVRVAVEAKNP 508
Query: 187 ADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSD 366
ADLPKLVEGLKRLAKSDPMVQCI EESGEHI+AGAGELHLEICLKDLEEDHACIP+KKSD
Sbjct: 509 ADLPKLVEGLKRLAKSDPMVQCIFEESGEHIIAGAGELHLEICLKDLEEDHACIPLKKSD 568
Query: 367 PVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARY 546
PVVSYRETV ES+Q+CLSKSPNKHNRL AQPMPDGL +DI+ G V+ RD+FK RA+Y
Sbjct: 569 PVVSYRETVQSESNQICLSKSPNKHNRLHCTAQPMPDGLADDIEGGTVSARDEFKARAKY 628
Query: 547 LTEKYEYDVTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKDSVV 684
EKYEY VTEARKIWCFGP+GTGPN+L+D +KGVQYLNEIKDSVV
Sbjct: 629 PGEKYEYAVTEARKIWCFGPDGTGPNLLMDVTKGVQYLNEIKDSVV 674
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 165 bits (400), Expect = 3e-41
Identities = 80/207 (38%), Positives = 130/207 (62%), Gaps = 3/207 (1%)
Frame = +1
Query: 25 IEDVPSGNICGLVGVDQFLVKTGTITTF---KNAHNMKVMKFSVSPVVRVAVEPKNPADL 195
+ VP+G + G+DQ +VKT TI ++ + + +KF+ V++AVEP NP++L
Sbjct: 545 VSRVPAGCWVLIEGIDQPIVKTATIAELGYEEDVYIFRPLKFNTRSCVKLAVEPINPSEL 604
Query: 196 PKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVV 375
PK+++GL+++ KS P++ EESGEH++ G GE +++ + D+ + + I IK +DPVV
Sbjct: 605 PKMLDGLRKVNKSYPLLTTRVEESGEHVLLGTGEFYMDCVMHDMRKVFSEIDIKVADPVV 664
Query: 376 SYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTE 555
++ ETV E S C +++PNK N++ M A+P+ L EDI+ V + + +
Sbjct: 665 TFNETVIETSTLKCFAETPNKKNKITMMAEPLEKQLDEDIENEVVQIGWNRRRLGEFFQT 724
Query: 556 KYEYDVTEARKIWCFGPEGTGPNILVD 636
KY +D+ AR IW FGP+ TGPNIL+D
Sbjct: 725 KYNWDLLAARSIWAFGPDTTGPNILLD 751
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 161 bits (390), Expect = 6e-40
Identities = 79/207 (38%), Positives = 129/207 (62%), Gaps = 3/207 (1%)
Frame = +1
Query: 25 IEDVPSGNICGLVGVDQFLVKTGTITTF---KNAHNMKVMKFSVSPVVRVAVEPKNPADL 195
+ VP+G + G+DQ +VKT TI ++ + + +KF+ V++AVEP NP++L
Sbjct: 420 VSRVPAGCWVLIEGIDQPIVKTATIAELGYEEDVYIFRPLKFNTRSCVKLAVEPINPSEL 479
Query: 196 PKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVV 375
PK+++GL+++ KS P++ EESGEH++ G GE +++ + D+ + + I IK +DPVV
Sbjct: 480 PKMLDGLRKVNKSYPLLTTRVEESGEHVLLGTGEFYMDCVMHDMRKVFSEIDIKVADPVV 539
Query: 376 SYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTE 555
++ ETV E S C +++PNK N++ M A+P+ L EDI+ V + + +
Sbjct: 540 TFNETVIETSTLKCFAETPNKKNKITMMAEPLEKQLDEDIENEVVQIGWNRRRLGEFFQT 599
Query: 556 KYEYDVTEARKIWCFGPEGTGPNILVD 636
KY +D+ AR IW FG + TGPNIL+D
Sbjct: 600 KYNWDLLAARSIWAFGLDTTGPNILLD 626
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 69.7 bits (163), Expect = 2e-12
Identities = 49/160 (30%), Positives = 79/160 (49%), Gaps = 2/160 (1%)
Frame = +1
Query: 19 EAIEDVPSGNICGLVGVDQFLVKTGTITTFKN-AHNMKVMKFSVSPVVRVAVEPKNPADL 195
E I +G+IC G+D +T +T +N A + + M PV+ +A++P N D
Sbjct: 404 EEITTAYAGDICATFGLDCHSGET--FSTDQNLAPHCESMHIP-EPVISMAIKPVNRKDA 460
Query: 196 PKLVEGLKRLAKSDPMVQC-INEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPV 372
++ L R K DP + N+E+ E IV+G GELHLEI + ++ ++ C P++ P
Sbjct: 461 DNFIKALTRFTKEDPTFRREYNQEAKETIVSGMGELHLEIYAQRMKSEYNC-PVELGKPT 519
Query: 373 VSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPED 492
V+YRE + K F + + + D LP D
Sbjct: 520 VAYRECLGSPYKFHFRHKKQTGGQGQFGEIEGVIDPLPSD 559
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 64.5 bits (150), Expect = 7e-11
Identities = 40/126 (31%), Positives = 69/126 (54%)
Frame = +1
Query: 28 EDVPSGNICGLVGVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLV 207
+ V SG IC + + L++ T+ + +K+ + +VRV++ + D+ L
Sbjct: 437 DTVTSGMICTIDA--EILLQNTTLCEKPDFPCLKIGSQTGEALVRVSISTQQLDDMDDLR 494
Query: 208 EGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRE 387
E LK LA D ++ + E+GE + AGE+HL+ C+KDL D + + S+P+V + E
Sbjct: 495 EKLKLLALLDTSLKVMELENGELAMVTAGEVHLQKCIKDL-NDLGLVDLDVSEPIVPFME 553
Query: 388 TVAEES 405
TV E+S
Sbjct: 554 TVIEDS 559
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 64.5 bits (150), Expect = 7e-11
Identities = 40/126 (31%), Positives = 69/126 (54%)
Frame = +1
Query: 28 EDVPSGNICGLVGVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLV 207
+ V SG IC + + L++ T+ + +K+ + +VRV++ + D+ L
Sbjct: 437 DTVTSGMICTIDA--EILLQNTTLCEKPDFPCLKIGSQTGEALVRVSISTQQLDDMDDLR 494
Query: 208 EGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRE 387
E LK LA D ++ + E+GE + AGE+HL+ C+KDL D + + S+P+V + E
Sbjct: 495 EKLKLLALLDTSLKVMELENGELAMVTAGEVHLQKCIKDL-NDLGLVDLDVSEPIVPFME 553
Query: 388 TVAEES 405
TV E+S
Sbjct: 554 TVIEDS 559
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +1
Query: 169 VEPKNPADLPKLVEGLKRLAKSDPMVQC-INEESGEHIVAGAGELHLEICLKDLEEDHAC 345
+EP + L + + L+ L + DP ++ + ++G+ IV GELHLE +KD + +
Sbjct: 399 IEPPSNRQLNQFNKALEELTREDPSMKIRFDRDTGQTIVETQGELHLE-AIKDRLKRNYK 457
Query: 346 IPIKKSDPVVSYRETVAEE 402
+ + V+YRE + EE
Sbjct: 458 LDVFIGKLQVAYREMLTEE 476
>U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile
(unfertilizable) protein2 protein.
Length = 548
Score = 32.7 bits (71), Expect = 0.25
Identities = 22/65 (33%), Positives = 33/65 (50%)
Frame = +1
Query: 340 ACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPR 519
AC+PI VS E ++ES+ K +K + +KA + DG+P D D+G +
Sbjct: 228 ACLPISVKCDGVSDCENESDESNCNKCQKGAHKCGKNCIKASKVCDGIP-DCDDGSDEHQ 286
Query: 520 DDFKT 534
D KT
Sbjct: 287 CDCKT 291
>Z79603-10|CAI79233.1| 224|Caenorhabditis elegans Hypothetical
protein M163.11 protein.
Length = 224
Score = 31.5 bits (68), Expect = 0.58
Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
Frame = -2
Query: 407 SDSSATVSRYDTTGSDFLIGMQAW-SSSRSLRQISRWSSPAPATMCSPDSSLIHCTMGSD 231
SDSS++ S T+ S + SSS S S SS + + + DSS + S
Sbjct: 43 SDSSSSSSTASTSSSSSTAATSSDDSSSSSSSSSSSASSTSSSDTTTADSSSTTSSDSST 102
Query: 230 LARRLRPSTSLGRSAGFLGSTATRTTGDTL-NFITFMLWA 114
+ STS S + ST++ TT + +F T WA
Sbjct: 103 TSSNSSSSTSSSDSTSVVSSTSSSTTTTCVDSFSTCTSWA 142
>U41278-3|AAK31512.1| 453|Caenorhabditis elegans Hypothetical
protein F33G12.4 protein.
Length = 453
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +1
Query: 115 AHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSD 237
A + F +P V V + NP L +L+E ++++ K +
Sbjct: 71 AQGKTTITFQTTPAVMVCISKANPEALAQLIEAIRKIVKGE 111
>Z95310-1|CAB08561.1| 444|Caenorhabditis elegans Hypothetical
protein H40L08.1 protein.
Length = 444
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -2
Query: 248 CTMGSDLARRLRPSTSLGRS 189
C MGS+ A+RLRP + GRS
Sbjct: 202 CVMGSEDAQRLRPDRAFGRS 221
>Z82076-6|CAH10809.1| 450|Caenorhabditis elegans Hypothetical
protein W07G1.5b protein.
Length = 450
Score = 29.5 bits (63), Expect = 2.3
Identities = 24/82 (29%), Positives = 37/82 (45%)
Frame = +1
Query: 280 VAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMK 459
V GA E+ LE ++ + D A I + PVV+ R A+ ++S +
Sbjct: 293 VTGAAEI-LEFPEEEKKIDMATIHRTPTPPVVASRPATAKAPGTPA-NRSATALEAKSVS 350
Query: 460 AQPMPDGLPEDIDEGRVNPRDD 525
QP P+ E+ DEG + DD
Sbjct: 351 QQPTPESSEEEEDEGNGDEDDD 372
>L07144-11|AAM54163.1| 144|Caenorhabditis elegans Hypothetical
protein R05D3.12 protein.
Length = 144
Score = 28.7 bits (61), Expect = 4.1
Identities = 22/76 (28%), Positives = 35/76 (46%)
Frame = +1
Query: 376 SYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTE 555
+Y VA DQ+ + +++ ++ K P GL + DE VN D+ +R
Sbjct: 62 TYIGGVAMREDQIIWLRD-SENRKMIAKEVTYPPGLLKIFDEILVNAADNKARDSRIYVL 120
Query: 556 KYEYDVTEARKIWCFG 603
+ YD T +R CFG
Sbjct: 121 RQSYD-TLSRHDNCFG 135
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = -2
Query: 212 PSTSLGRSAGFLGSTATRTTGDTLN 138
PSTS G AGFL STA + G N
Sbjct: 142 PSTSSGLPAGFLNSTANSSVGANNN 166
>Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical
protein K04G2.8b protein.
Length = 1188
Score = 28.3 bits (60), Expect = 5.4
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Frame = -2
Query: 341 AWSSSRSLRQISRWSSPAPATMCSPDSSLIHCTMGSDLARRLRPSTSLGRSAGFLGSTAT 162
A +SSR+L +S PA TMC+ +L T + + S+G +T T
Sbjct: 638 AANSSRALSPVSYNDIPASPTMCAQVFNLPKSTESEHHQLTSQQQNTTHYSSG-SANTMT 696
Query: 161 RTTGDT---LNFITFMLWAFLKVVMVPVLTKN*STPTR 57
R+ G T ++ I +A L ++V T N + P +
Sbjct: 697 RSDGATTVPMDNIITPTYAILNPILVHEQTPNGTVPRK 734
>Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical
protein K04G2.8a protein.
Length = 1186
Score = 28.3 bits (60), Expect = 5.4
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Frame = -2
Query: 341 AWSSSRSLRQISRWSSPAPATMCSPDSSLIHCTMGSDLARRLRPSTSLGRSAGFLGSTAT 162
A +SSR+L +S PA TMC+ +L T + + S+G +T T
Sbjct: 636 AANSSRALSPVSYNDIPASPTMCAQVFNLPKSTESEHHQLTSQQQNTTHYSSG-SANTMT 694
Query: 161 RTTGDT---LNFITFMLWAFLKVVMVPVLTKN*STPTR 57
R+ G T ++ I +A L ++V T N + P +
Sbjct: 695 RSDGATTVPMDNIITPTYAILNPILVHEQTPNGTVPRK 732
>AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein.
Length = 1186
Score = 28.3 bits (60), Expect = 5.4
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Frame = -2
Query: 341 AWSSSRSLRQISRWSSPAPATMCSPDSSLIHCTMGSDLARRLRPSTSLGRSAGFLGSTAT 162
A +SSR+L +S PA TMC+ +L T + + S+G +T T
Sbjct: 636 AANSSRALSPVSYNDIPASPTMCAQVFNLPKSTESEHHQLTSQQQNTTHYSSG-SANTMT 694
Query: 161 RTTGDT---LNFITFMLWAFLKVVMVPVLTKN*STPTR 57
R+ G T ++ I +A L ++V T N + P +
Sbjct: 695 RSDGATTVPMDNIITPTYAILNPILVHEQTPNGTVPRK 732
>U70852-8|ABB51182.1| 868|Caenorhabditis elegans Hypothetical
protein F45E4.7a protein.
Length = 868
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Frame = +1
Query: 454 MKAQPMPDGLPEDIDEGRVNP---RDDFKTRARYLTEKYEYDVTEARKI 591
++ P P PE R NP RDD + ++ E+ VTE R I
Sbjct: 87 IQIHPAPIAGPESTSSFRTNPEENRDDEEDNVEETDQEIEFPVTEERSI 135
>U53344-5|AAA96226.2| 442|Caenorhabditis elegans More of ms protein
1 protein.
Length = 442
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -1
Query: 297 FSSTSDNVFS*FFINTLHHGVRFSQTFKTFY*LGQIS 187
F+ST+ NVF F +++L HG+ F T T LG I+
Sbjct: 303 FNSTACNVFFTFAVSSLLHGLDFQMTI-TLLALGFIA 338
>AF209707-1|AAF28335.1| 522|Caenorhabditis elegans phosphoinositide
3-kinase adaptersubunit protein.
Length = 522
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -2
Query: 302 WSSPAPATMCSPDSSLIHCT 243
W SP+P T S DS L+H T
Sbjct: 495 WDSPSPDTPSSSDSRLVHPT 514
>AF013489-1|AAC47728.1| 442|Caenorhabditis elegans MOM-1 protein.
Length = 442
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -1
Query: 297 FSSTSDNVFS*FFINTLHHGVRFSQTFKTFY*LGQIS 187
F+ST+ NVF F +++L HG+ F T T LG I+
Sbjct: 303 FNSTACNVFFTFAVSSLLHGLDFQMTI-TLLALGFIA 338
>AC006708-6|AAF60427.2| 522|Caenorhabditis elegans Phosphoinositide
kinase adaptersubunit protein 1 protein.
Length = 522
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -2
Query: 302 WSSPAPATMCSPDSSLIHCT 243
W SP+P T S DS L+H T
Sbjct: 495 WDSPSPDTPSSSDSRLVHPT 514
>Z81462-2|CAB03841.1| 263|Caenorhabditis elegans Hypothetical
protein C04H5.2 protein.
Length = 263
Score = 27.5 bits (58), Expect = 9.4
Identities = 7/25 (28%), Positives = 16/25 (64%)
Frame = +3
Query: 48 HLWSCWSRSVLSQDWYHHHFQECPQ 122
+LW+ W++ S +W+ + ++C Q
Sbjct: 188 YLWTTWAQGEPSANWWEYDIEDCLQ 212
>Z69788-7|CAM33502.1| 132|Caenorhabditis elegans Hypothetical
protein F09A5.9 protein.
Length = 132
Score = 27.5 bits (58), Expect = 9.4
Identities = 17/64 (26%), Positives = 29/64 (45%)
Frame = +1
Query: 223 LAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEE 402
L SD ++ E GEH GE+ + L+ H C +++D ++ E A+
Sbjct: 52 LFDSDDVLDETTVEYGEHFTLDGGEIEIFSTEPYLQIVHKCFGTERTD-IIDLSEFEADS 110
Query: 403 SDQL 414
+D L
Sbjct: 111 NDIL 114
>Z48583-4|CAN99691.1| 3394|Caenorhabditis elegans Hypothetical
protein F54B3.1b protein.
Length = 3394
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +1
Query: 34 VPSGNI-CGLVGVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVE 210
VP+G +VG +QF+V T T+ + + V +SP V +A + N + +++
Sbjct: 7 VPAGGDGTEVVGDEQFIVTVRTKCTYISRYYRIVFVLDLSPSVVMADDESNCCLVDRIIP 66
Query: 211 GLKRLAKS 234
L+ +S
Sbjct: 67 SLRNALRS 74
>Z48583-3|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical
protein F54B3.1a protein.
Length = 3396
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +1
Query: 34 VPSGNI-CGLVGVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVE 210
VP+G +VG +QF+V T T+ + + V +SP V +A + N + +++
Sbjct: 7 VPAGGDGTEVVGDEQFIVTVRTKCTYISRYYRIVFVLDLSPSVVMADDESNCCLVDRIIP 66
Query: 211 GLKRLAKS 234
L+ +S
Sbjct: 67 SLRNALRS 74
>U64836-6|AAG24056.2| 201|Caenorhabditis elegans Hypothetical
protein F10G2.1 protein.
Length = 201
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +1
Query: 415 CLSKSPNKHNRLFMKAQPMPDGLPEDIDE 501
C K NK++ + P PD + E+ DE
Sbjct: 116 CSEKLENKNSTCYQNWDPFPDAIDEETDE 144
>U55364-6|AAA97973.1| 2541|Caenorhabditis elegans Hypothetical protein
F21C10.7 protein.
Length = 2541
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +1
Query: 349 PIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPD 477
P S+ V + R+T E+ Q ++K+P+ N ++ P+P+
Sbjct: 1626 PGPTSEHVATIRKTPVRETHQSSITKAPSLENVAKIRQSPVPE 1668
>U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death
abnormality protein 6 protein.
Length = 492
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = -2
Query: 404 DSSATVSRYDTTGSDFLIGMQAWSSSRSLRQISRWSSPAPATMCSPDSSLI 252
+ +T + Y+ G+DFL G+Q + +S A A + P+SS +
Sbjct: 379 EKKSTAAEYNPFGADFLSGIQNGKEAPPSASAELLASEAIARLPKPESSSV 429
>AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate
adaptor protein CED-6 protein.
Length = 492
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = -2
Query: 404 DSSATVSRYDTTGSDFLIGMQAWSSSRSLRQISRWSSPAPATMCSPDSSLI 252
+ +T + Y+ G+DFL G+Q + +S A A + P+SS +
Sbjct: 379 EKKSTAAEYNPFGADFLSGIQNGKEAPPSASAELLASEAIARLPKPESSSV 429
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.316 0.136 0.405
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,668,418
Number of Sequences: 27780
Number of extensions: 369814
Number of successful extensions: 1205
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1200
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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