BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= NRPG0383 (684 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 301 3e-82 At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 179 1e-45 At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 179 1e-45 At5g25230.1 68418.m02991 elongation factor Tu family protein tra... 175 2e-44 At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 119 2e-27 At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 69 3e-12 At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 60 1e-09 At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 60 1e-09 At2g47500.1 68415.m05929 kinesin motor protein-related 30 1.2 At5g26210.1 68418.m03119 PHD finger family protein contains Pfam... 30 1.6 At1g67560.1 68414.m07697 lipoxygenase family protein similar to ... 29 2.9 At1g70890.1 68414.m08179 major latex protein-related / MLP-relat... 29 3.8 At1g70160.1 68414.m08073 expressed protein similar to hypothetic... 29 3.8 At5g17300.1 68418.m02026 myb family transcription factor similar... 28 5.0 At1g51930.1 68414.m05854 zinc finger (C3HC4-type RING finger) fa... 28 5.0 At5g41430.1 68418.m05032 zinc finger (C3HC4-type RING finger) fa... 28 6.6 At3g59570.1 68416.m06647 RabGAP/TBC domain-containing protein si... 28 6.6 At5g38500.1 68418.m04654 hypothetical protein contains Pfam prof... 27 8.8 At3g47480.1 68416.m05163 calcium-binding EF hand family protein ... 27 8.8 At3g42790.1 68416.m04474 PHD finger family protein contains PHD-... 27 8.8 >At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, putative similar to ELONGATION FACTOR 2 GB:O14460 from [Schizosaccharomyces pombe] Length = 843 Score = 301 bits (739), Expect = 3e-82 Identities = 147/225 (65%), Positives = 177/225 (78%), Gaps = 3/225 (1%) Frame = +1 Query: 19 EAIEDVPSGNICGLVGVDQFLVKTGTITTFK--NAHNMKVMKFSVSPVVRVAVEPKNPAD 192 E +EDVP GN +VG+DQF+ K T+T K +AH ++ MKFSVSPVVRVAV+ K +D Sbjct: 441 ETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASD 500 Query: 193 LPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDH-ACIPIKKSDP 369 LPKLVEGLKRLAKSDPMV C EESGEHIVAGAGELHLEICLKDL++D I KSDP Sbjct: 501 LPKLVEGLKRLAKSDPMVVCTMEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDP 560 Query: 370 VVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYL 549 VVS+RETV + S + +SKSPNKHNRL+M+A+PM +GL E ID+GR+ PRDD K R++ L Sbjct: 561 VVSFRETVCDRSTRTVMSKSPNKHNRLYMEARPMEEGLAEAIDDGRIGPRDDPKIRSKIL 620 Query: 550 TEKYEYDVTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKDSVV 684 E++ +D A+KIW FGPE TGPN++VD KGVQYLNEIKDSVV Sbjct: 621 AEEFGWDKDLAKKIWAFGPETTGPNMVVDMCKGVQYLNEIKDSVV 665 >At1g06220.2 68414.m00656 elongation factor Tu family protein similar to Cryptosporidium parvum elongation factor-2 GB:U21667 GI:706974 from [Cryptosporidium parvum] Length = 987 Score = 179 bits (436), Expect = 1e-45 Identities = 89/227 (39%), Positives = 142/227 (62%), Gaps = 7/227 (3%) Frame = +1 Query: 25 IEDVPSGNICGLVGVDQFLVKTGTITTF---KNAHNMKVMKFSVSPVVRVAVEPKNPADL 195 + P G+ + GVD ++KT T+ ++ + + ++F+ PVV+ A EP NP++L Sbjct: 555 VSSAPPGSWVLIEGVDASIMKTATLCNASYDEDVYIFRALQFNTLPVVKTATEPLNPSEL 614 Query: 196 PKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVV 375 PK+VEGL++++KS P+ EESGEH + G GEL+L+ +KDL E ++ + +K +DPVV Sbjct: 615 PKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLRELYSEVEVKVADPVV 674 Query: 376 SYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTE 555 S+ ETV E S C +++PNK N++ M A+P+ GL EDI+ G V+ + K + Sbjct: 675 SFCETVVESSSMKCFAETPNKKNKITMIAEPLDRGLAEDIENGVVSIDWNRKQLGDFFRT 734 Query: 556 KYEYDVTEARKIWCFGPEGTGPNILVDCSKGVQ----YLNEIKDSVV 684 KY++D+ AR IW FGP+ GPNIL+D + + + +KDS+V Sbjct: 735 KYDWDLLAARSIWAFGPDKQGPNILLDDTLPTEVDRNLMMAVKDSIV 781 >At1g06220.1 68414.m00655 elongation factor Tu family protein similar to Cryptosporidium parvum elongation factor-2 GB:U21667 GI:706974 from [Cryptosporidium parvum] Length = 987 Score = 179 bits (436), Expect = 1e-45 Identities = 89/227 (39%), Positives = 142/227 (62%), Gaps = 7/227 (3%) Frame = +1 Query: 25 IEDVPSGNICGLVGVDQFLVKTGTITTF---KNAHNMKVMKFSVSPVVRVAVEPKNPADL 195 + P G+ + GVD ++KT T+ ++ + + ++F+ PVV+ A EP NP++L Sbjct: 555 VSSAPPGSWVLIEGVDASIMKTATLCNASYDEDVYIFRALQFNTLPVVKTATEPLNPSEL 614 Query: 196 PKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVV 375 PK+VEGL++++KS P+ EESGEH + G GEL+L+ +KDL E ++ + +K +DPVV Sbjct: 615 PKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLRELYSEVEVKVADPVV 674 Query: 376 SYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTE 555 S+ ETV E S C +++PNK N++ M A+P+ GL EDI+ G V+ + K + Sbjct: 675 SFCETVVESSSMKCFAETPNKKNKITMIAEPLDRGLAEDIENGVVSIDWNRKQLGDFFRT 734 Query: 556 KYEYDVTEARKIWCFGPEGTGPNILVDCSKGVQ----YLNEIKDSVV 684 KY++D+ AR IW FGP+ GPNIL+D + + + +KDS+V Sbjct: 735 KYDWDLLAARSIWAFGPDKQGPNILLDDTLPTEVDRNLMMAVKDSIV 781 >At5g25230.1 68418.m02991 elongation factor Tu family protein translation Elongation Factor 2, Schizosaccharomyces pombe, PIR:T39902 Length = 973 Score = 175 bits (426), Expect = 2e-44 Identities = 89/227 (39%), Positives = 140/227 (61%), Gaps = 7/227 (3%) Frame = +1 Query: 25 IEDVPSGNICGLVGVDQFLVKTGTITTF---KNAHNMKVMKFSVSPVVRVAVEPKNPADL 195 + P G+ + GVD ++KT T+ ++ + + +KF+ PVV+ A EP NP++L Sbjct: 541 VSSAPPGSWVLIEGVDASIMKTATLCNASYDEDVYIFRALKFNTLPVVKTATEPLNPSEL 600 Query: 196 PKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVV 375 PK+VEGL++++KS P+ EESGEH + G GEL+L+ +KDL E ++ + +K +DPVV Sbjct: 601 PKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIIKDLRELYSEVQVKVADPVV 660 Query: 376 SYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTE 555 S+ ETV E S C +++PNK N+L M A+P+ GL EDI+ G V+ + + Sbjct: 661 SFCETVVESSSMKCFAETPNKKNKLTMIAEPLDRGLAEDIENGVVSIDWNRVQLGDFFRT 720 Query: 556 KYEYDVTEARKIWCFGPEGTGPNILVDCSKGVQ----YLNEIKDSVV 684 KY++D+ AR IW FGP+ G NIL+D + + + +KDS+V Sbjct: 721 KYDWDLLAARSIWAFGPDKQGTNILLDDTLPTEVDRNLMMGVKDSIV 767 >At3g22980.1 68416.m02898 elongation factor Tu family protein similar to eukaryotic translation elongation factor 2 GB:NP_001952 [Homo sapiens] Length = 1015 Score = 119 bits (287), Expect = 2e-27 Identities = 52/130 (40%), Positives = 88/130 (67%) Frame = +1 Query: 25 IEDVPSGNICGLVGVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVRVAVEPKNPADLPKL 204 + +V +GN+ + G+ ++ K+ T+++ +N + M+F VSP +RVA+EP +PAD+ L Sbjct: 495 VTEVKAGNVVAIRGLGPYISKSATLSSTRNCWPLASMEFQVSPTLRVAIEPSDPADMSAL 554 Query: 205 VEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYR 384 ++GL+ L ++DP V+ GEH++A AGE+HLE C+KDL+E A + ++ S P+VSYR Sbjct: 555 MKGLRLLNRADPFVEITVSARGEHVLAAAGEVHLERCVKDLKERFAKVNLEVSPPLVSYR 614 Query: 385 ETVAEESDQL 414 ET+ + L Sbjct: 615 ETIEGDGSNL 624 >At1g62750.1 68414.m07082 elongation factor Tu family protein similar to elongation factor G SP:P34811 [Glycine max (Soybean)] Length = 783 Score = 68.9 bits (161), Expect = 3e-12 Identities = 43/129 (33%), Positives = 74/129 (57%), Gaps = 2/129 (1%) Frame = +1 Query: 19 EAIEDVPSGNICGLVGVDQFLVKTG-TITTFKNAHNMKVMKFSVSPVVRVAVEPKNPADL 195 E ++ +G+I L G+ + TG T++ +N ++ M F PV++VA+EPK AD+ Sbjct: 451 EDVKVALTGDIIALAGLKDTI--TGETLSDPENPVVLERMDFP-DPVIKVAIEPKTKADI 507 Query: 196 PKLVEGLKRLAKSDPMVQ-CINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPV 372 K+ GL +LA+ DP +EE + ++ G GELHLEI + L+ + + P Sbjct: 508 DKMATGLIKLAQEDPSFHFSRDEEMNQTVIEGMGELHLEIIVDRLKREFK-VEANVGAPQ 566 Query: 373 VSYRETVAE 399 V+YRE++++ Sbjct: 567 VNYRESISK 575 >At2g45030.1 68415.m05606 mitochondrial elongation factor, putative similar to SP|P25039 Elongation factor G 1, mitochondrial precursor (mEF-G-1) {Saccharomyces cerevisiae}; contains Pfam profiles PF00009: Elongation factor Tu GTP binding domain, PF03764: Elongation factor G domain IV, PF00679: Elongation factor G C-terminus Length = 754 Score = 60.5 bits (140), Expect = 1e-09 Identities = 44/165 (26%), Positives = 81/165 (49%), Gaps = 5/165 (3%) Frame = +1 Query: 19 EAIEDVPSGNICGLVGVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVRVAVEPKNPADLP 198 E I++ +G I + G++ T T + M M PV+ +AV+P + Sbjct: 420 EDIQEAHAGQIVAVFGIE--CASGDTFTDGSVKYTMTSMNVP-EPVMSLAVQPVSKDSGG 476 Query: 199 KLVEGLKRLAKSDPMVQC-INEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVV 375 + + L R K DP + ++ ESG+ I++G GELHL+I ++ + ++ + P V Sbjct: 477 QFSKALNRFQKEDPTFRVGLDPESGQTIISGMGELHLDIYVERMRREYK-VDATVGKPRV 535 Query: 376 SYRETVAE--ESDQLCLSKS--PNKHNRLFMKAQPMPDGLPEDID 498 ++RET+ + E D L +S ++ R+ +P+P G E + Sbjct: 536 NFRETITQRAEFDYLHKKQSGGAGQYGRVTGYVEPLPPGSKEKFE 580 >At1g45332.1 68414.m05195 mitochondrial elongation factor, putative similar to mitochondrial elongation factor GI:3917 from [Saccharomyces cerevisiae] Length = 754 Score = 60.5 bits (140), Expect = 1e-09 Identities = 44/165 (26%), Positives = 81/165 (49%), Gaps = 5/165 (3%) Frame = +1 Query: 19 EAIEDVPSGNICGLVGVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVRVAVEPKNPADLP 198 E I++ +G I + G++ T T + M M PV+ +AV+P + Sbjct: 420 EDIQEAHAGQIVAVFGIE--CASGDTFTDGSVKYTMTSMNVP-EPVMSLAVQPVSKDSGG 476 Query: 199 KLVEGLKRLAKSDPMVQC-INEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVV 375 + + L R K DP + ++ ESG+ I++G GELHL+I ++ + ++ + P V Sbjct: 477 QFSKALNRFQKEDPTFRVGLDPESGQTIISGMGELHLDIYVERMRREYK-VDATVGKPRV 535 Query: 376 SYRETVAE--ESDQLCLSKS--PNKHNRLFMKAQPMPDGLPEDID 498 ++RET+ + E D L +S ++ R+ +P+P G E + Sbjct: 536 NFRETITQRAEFDYLHKKQSGGAGQYGRVTGYVEPLPPGSKEKFE 580 >At2g47500.1 68415.m05929 kinesin motor protein-related Length = 974 Score = 30.3 bits (65), Expect = 1.2 Identities = 14/36 (38%), Positives = 20/36 (55%) Frame = +1 Query: 109 KNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGL 216 +N N S+S +VR + K P D+PKL+E L Sbjct: 218 ENDSNKLSSPSSLSTLVRAVLSDKKPEDVPKLIESL 253 >At5g26210.1 68418.m03119 PHD finger family protein contains Pfam domain, PF00628: PHD-finger Length = 255 Score = 29.9 bits (64), Expect = 1.6 Identities = 12/32 (37%), Positives = 19/32 (59%) Frame = +1 Query: 400 ESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDI 495 E + LCL PN+H + + A+ +P LPE + Sbjct: 44 EKENLCLYGHPNEHWEVNLPAEEVPPELPEPV 75 >At1g67560.1 68414.m07697 lipoxygenase family protein similar to 13-lipoxygenase GB:CAA65269 [Solanum tuberosum], gi:1654140 [Lycopersicon esculentum] Length = 917 Score = 29.1 bits (62), Expect = 2.9 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 5/56 (8%) Frame = +1 Query: 421 SKSPNKHNRLFMKAQPM-----PDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDV 573 SK+ N R+ ++QP PDG+ E ++ V+ R D K + Y+YDV Sbjct: 204 SKNDNPQARIIFRSQPCLPSETPDGIKELREKDLVSVRGDGKGERKPHERIYDYDV 259 >At1g70890.1 68414.m08179 major latex protein-related / MLP-related low similarity to major latex protein {Papaver somniferum}[GI:294062] ; contains Pfam profile PF00407: Pathogenesis-related protein Bet v I family Length = 158 Score = 28.7 bits (61), Expect = 3.8 Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 1/62 (1%) Frame = -1 Query: 471 HGLSLHEQTVVLVGRL*ETELVRFLSYG-LTVRHDRVRLLDWNASMVLLKILKTDLKMEF 295 HG LHE VG + + +++ G LTV +++ +D +++ K+L+ DL E+ Sbjct: 44 HGCELHEGDWGKVGSI---VIWKYVHDGKLTVGKNKIEAVDPEKNLITFKVLEGDLMNEY 100 Query: 294 SS 289 S Sbjct: 101 KS 102 >At1g70160.1 68414.m08073 expressed protein similar to hypothetical protein GI:4455225 from [Arabidopsis thaliana] Length = 523 Score = 28.7 bits (61), Expect = 3.8 Identities = 21/81 (25%), Positives = 30/81 (37%) Frame = +1 Query: 256 NEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPN 435 NE+ E IV + E+ LKD + D + T A E + L K Sbjct: 272 NEKGEEIIVVIPWDEWWELTLKDNSNPQVALLPLHPDIRAKFNNTAAWEYARSMLGKPYG 331 Query: 436 KHNRLFMKAQPMPDGLPEDID 498 HN +F + D P +D Sbjct: 332 YHNMIFSWIDTLGDNYPPPLD 352 >At5g17300.1 68418.m02026 myb family transcription factor similar to CCA1 [Arabidopsis thaliana] GI:4090569; contains Pfam profile PF00249: Myb-like DNA-binding domain Length = 387 Score = 28.3 bits (60), Expect = 5.0 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = -2 Query: 404 DSSATVSRYDTTGSDFLIGMQAWSSSRSLRQISRWSSPAPAT 279 D+ + S T GS+ L + + S +RSL +S S PA T Sbjct: 154 DTQSPTSVLSTVGSEALCSLDSSSPNRSLSPVSSASPPAALT 195 >At1g51930.1 68414.m05854 zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger) Length = 132 Score = 28.3 bits (60), Expect = 5.0 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = +1 Query: 253 INEESGEHIVAGAGELHLEICLKDLEEDH 339 I EE G G G+ ICL++ E+DH Sbjct: 63 IKEEEGGREEEGGGKRFCPICLEEYEDDH 91 >At5g41430.1 68418.m05032 zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger) Length = 161 Score = 27.9 bits (59), Expect = 6.6 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = +1 Query: 286 GAGELHLEICLKDLEEDHACIPIKK 360 G E+ ICL++LE+ H I IKK Sbjct: 111 GFDEIGCSICLEELEDGHEIIRIKK 135 >At3g59570.1 68416.m06647 RabGAP/TBC domain-containing protein similar to GTPase activating protein [Yarrowia lipolytica] GI:2370595; contains Pfam profile PF00566: TBC domain Length = 720 Score = 27.9 bits (59), Expect = 6.6 Identities = 12/39 (30%), Positives = 21/39 (53%) Frame = -1 Query: 390 GLTVRHDRVRLLDWNASMVLLKILKTDLKMEFSSTSDNV 274 G TV+ DRV W +++ +++TD +EF N+ Sbjct: 348 GGTVKEDRVSEWLWTLHRIVVDVVRTDSHLEFYEDPGNL 386 >At5g38500.1 68418.m04654 hypothetical protein contains Pfam profile PF03754: Domain of unknown function (DUF313) Length = 411 Score = 27.5 bits (58), Expect = 8.8 Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 2/54 (3%) Frame = +1 Query: 328 EEDHACIPIKKSDPVVSYRETVAEESD--QLCLSKSPNKHNRLFMKAQPMPDGL 483 EE + +K + S ++TV+EE D + LS P K +K Q P+G+ Sbjct: 25 EEQRRRLLAEKREDSKSQKKTVSEEDDSEKRFLSHVPRKKRSSLVKRQQKPNGV 78 >At3g47480.1 68416.m05163 calcium-binding EF hand family protein contains INTERPRO:IPR002048 calcium-binding EF-hand domain Length = 183 Score = 27.5 bits (58), Expect = 8.8 Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 1/45 (2%) Frame = +1 Query: 151 PVVRVAVEPKNPADLPKLVEGLKRLAK-SDPMVQCINEESGEHIV 282 P+++ V P N AD+ VE +K + S+ + +C+ EE E+++ Sbjct: 63 PIIKKVVVP-NRADIKTSVEEVKAIIDDSEALYECLIEEGEEYLL 106 >At3g42790.1 68416.m04474 PHD finger family protein contains PHD-finger domain, INTERPRO:IPR001965 Length = 250 Score = 27.5 bits (58), Expect = 8.8 Identities = 16/62 (25%), Positives = 27/62 (43%) Frame = +1 Query: 304 LEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGL 483 +E KD + I + V + + E + LCL PN+ + + A+ +P L Sbjct: 13 VEEVFKDFKGRRTAIVKALTTDVQEFYQQCDPEKENLCLYGLPNEEWEVNLPAEEVPPEL 72 Query: 484 PE 489 PE Sbjct: 73 PE 74 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.316 0.136 0.405 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,964,965 Number of Sequences: 28952 Number of extensions: 352805 Number of successful extensions: 1133 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 1093 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1124 length of database: 12,070,560 effective HSP length: 79 effective length of database: 9,783,352 effective search space used: 1447936096 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.6 bits)
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