Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0378
         (651 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.2  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    23   2.9  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    23   2.9  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    23   2.9  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   5.0  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    21   6.7  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    21   6.7  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    21   6.7  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   6.7  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +3

Query: 447 CGSDGITYNNDCLLNCATINDSRLGIEYYGPCADKVIVVDP 569
           C S+GI  +     NCA     R G+ Y+  CA+  ++ DP
Sbjct: 560 CRSEGIFSDPK---NCAAYYVCRSGLSYHLSCAEN-MMFDP 596



 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -3

Query: 445  TGFISRVHVHEGYLLGPSTILTSSAQRP 362
            TG  S  H+H  +   PST  +S+   P
Sbjct: 1023 TGASSTEHMHPDWTTKPSTWWSSTTTSP 1050


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +1

Query: 226 GNVGFPACHCDYDLNQ 273
           GN GF A    YDLNQ
Sbjct: 416 GNKGFVAFTIGYDLNQ 431


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +1

Query: 226 GNVGFPACHCDYDLNQ 273
           GN GF A    YDLNQ
Sbjct: 417 GNKGFVAFTIGYDLNQ 432


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +1

Query: 226 GNVGFPACHCDYDLNQ 273
           GN GF A    YDLNQ
Sbjct: 417 GNKGFVAFTIGYDLNQ 432


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +1

Query: 349  AFCTRAFAQTKSKSWTAPANT 411
            A CT   AQT   SW +P  T
Sbjct: 1107 ATCTTLTAQTIRVSWVSPPLT 1127


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 121 VCGTDGKTYNNE 156
           +CG  GK +NNE
Sbjct: 13  LCGKVGKNFNNE 24


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 121 VCGTDGKTYNNE 156
           +CG  GK +NNE
Sbjct: 13  LCGKVGKNFNNE 24


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 121 VCGTDGKTYNNE 156
           +CG  GK +NNE
Sbjct: 12  LCGKVGKNFNNE 23


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/29 (34%), Positives = 12/29 (41%)
 Frame = +3

Query: 333  TNPGLSILYSGLCADEVKIVDGPSKYPSC 419
            T PG  + +S  C D V   D   K   C
Sbjct: 1031 TTPGAILAFSWACNDAVMTSDSIMKCAFC 1059


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,684
Number of Sequences: 336
Number of extensions: 3280
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)