Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0377
         (643 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-2649|AAN09453.1|  357|Drosophila melanogaster CG32494-P...    32   0.57 
AY058688-1|AAL13917.1|  395|Drosophila melanogaster LD40777p pro...    28   9.4  
AE014296-1990|AAF50037.2|  395|Drosophila melanogaster CG7351-PA...    28   9.4  

>AE014298-2649|AAN09453.1|  357|Drosophila melanogaster CG32494-PA
           protein.
          Length = 357

 Score = 32.3 bits (70), Expect = 0.57
 Identities = 19/47 (40%), Positives = 23/47 (48%)
 Frame = -1

Query: 253 KQATGRPTSTSDNKHFIHHVFTCLTSTCRIEVASNA*NYNTTTLPRL 113
           KQ   +PTST    HF     T   +T   EVA+ A    TTT+ RL
Sbjct: 119 KQKLAKPTSTKGQTHFKRQATTIFVATAAAEVAAAA---ATTTIERL 162


>AY058688-1|AAL13917.1|  395|Drosophila melanogaster LD40777p
           protein.
          Length = 395

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
 Frame = -3

Query: 119 KAAIHQFVYMFSNCPSRF--NMRMLV 48
           +AA+    Y FSNCP RF  N R+++
Sbjct: 225 QAAVQYLSYAFSNCPDRFASNKRLIL 250


>AE014296-1990|AAF50037.2|  395|Drosophila melanogaster CG7351-PA
           protein.
          Length = 395

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
 Frame = -3

Query: 119 KAAIHQFVYMFSNCPSRF--NMRMLV 48
           +AA+    Y FSNCP RF  N R+++
Sbjct: 225 QAAVQYLSYAFSNCPDRFASNKRLIL 250


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,132,464
Number of Sequences: 53049
Number of extensions: 444620
Number of successful extensions: 596
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 596
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2703623850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)