Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0376
         (634 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7S1R5 Cluster: Putative uncharacterized protein NCU098...    34   3.3  
UniRef50_A3ILA0 Cluster: Putative uncharacterized protein; n=1; ...    33   4.3  
UniRef50_Q8T7L8 Cluster: Seroin 1; n=1; Bombyx mori|Rep: Seroin ...    33   4.3  
UniRef50_A2DGN8 Cluster: Putative uncharacterized protein; n=1; ...    33   7.5  
UniRef50_A0BS30 Cluster: Chromosome undetermined scaffold_124, w...    33   7.5  
UniRef50_P29347 Cluster: Modification methylase StsI; n=5; Bacte...    33   7.5  
UniRef50_A2TXF8 Cluster: Putative uncharacterized protein; n=1; ...    32   10.0 
UniRef50_Q8ILW3 Cluster: Putative uncharacterized protein; n=1; ...    32   10.0 
UniRef50_A1CL10 Cluster: Serine/threonine protein kinase, putati...    32   10.0 

>UniRef50_Q7S1R5 Cluster: Putative uncharacterized protein
           NCU09827.1; n=1; Neurospora crassa|Rep: Putative
           uncharacterized protein NCU09827.1 - Neurospora crassa
          Length = 532

 Score = 33.9 bits (74), Expect = 3.3
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = +1

Query: 196 DWEKVHELINSKLNENDSWKPVSAGSVKSLKPIPGGHVYGESEY 327
           DW+KV EL+     E   W+       +S  P   G V+GE+E+
Sbjct: 362 DWDKVEELVEEVKEEEGEWEDSFVLERQSEDPDSEGQVHGEAEF 405


>UniRef50_A3ILA0 Cluster: Putative uncharacterized protein; n=1;
           Cyanothece sp. CCY 0110|Rep: Putative uncharacterized
           protein - Cyanothece sp. CCY 0110
          Length = 791

 Score = 33.5 bits (73), Expect = 4.3
 Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 5/54 (9%)
 Frame = +1

Query: 301 GHVY-----GESEYTFHSSSDINGQKTDKSGGHKIINDDGKVYEFDFNPKVKGY 447
           GHV+     G S    HS+SD   +   K G + IIN +G +Y  DF+ K K Y
Sbjct: 68  GHVFIVGAVGYSGSPKHSNSDYVVEPA-KEGWNAIINGEGMIYRLDFHEKGKAY 120


>UniRef50_Q8T7L8 Cluster: Seroin 1; n=1; Bombyx mori|Rep: Seroin 1 -
           Bombyx mori (Silk moth)
          Length = 108

 Score = 33.5 bits (73), Expect = 4.3
 Identities = 17/35 (48%), Positives = 23/35 (65%)
 Frame = +1

Query: 313 GESEYTFHSSSDINGQKTDKSGGHKIINDDGKVYE 417
           GES+ ++ SSS +NG KT  SGG   + +DGK  E
Sbjct: 65  GESKSSYSSSSTVNG-KTVSSGGVSELTNDGKAVE 98


>UniRef50_A2DGN8 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 640

 Score = 32.7 bits (71), Expect = 7.5
 Identities = 19/82 (23%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
 Frame = +1

Query: 196 DWEKVHELINSKLNENDSWKPVSAGSVKSLKPIPGGHVYGESEYTFHSSSDINGQKTDKS 375
           ++ ++H +I S L+E+DS+          +        Y E +Y F    D++ Q     
Sbjct: 393 NFSEIHRMIPSYLSESDSYYEDLDSEYVQMAYSSDMEEYEEEDYAFEEEEDLSDQDLSDQ 452

Query: 376 GGHKIINDDGKVYEFD-FNPKV 438
              KIIN    ++ +   NP +
Sbjct: 453 MLEKIINKRLSIFNYSKINPLI 474


>UniRef50_A0BS30 Cluster: Chromosome undetermined scaffold_124,
           whole genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_124,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 334

 Score = 32.7 bits (71), Expect = 7.5
 Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
 Frame = +1

Query: 298 GGHVYGESEYTFHSSSDING--QKTDKSGGHKIINDDGKVYEFDF-NPKVKGY 447
           G ++ G  +YT+  S    G  +   K+G  K +  DGKVYE DF N +  GY
Sbjct: 237 GNNIDGFGKYTWPDSKYYQGYWKNNKKNGKGKYLWPDGKVYEGDFVNDQKHGY 289


>UniRef50_P29347 Cluster: Modification methylase StsI; n=5;
           Bacteria|Rep: Modification methylase StsI -
           Streptococcus sanguis
          Length = 653

 Score = 32.7 bits (71), Expect = 7.5
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -2

Query: 189 RGSIKQLITDWKTWDRLNGNHDEHCYKNQLHNANA 85
           +G   QL+ DW     LN N+ +H Y N  HN+ +
Sbjct: 597 KGKTNQLLKDWAYSRNLNVNYLDHNYNNSSHNSKS 631


>UniRef50_A2TXF8 Cluster: Putative uncharacterized protein; n=1;
           Polaribacter dokdonensis MED152|Rep: Putative
           uncharacterized protein - Polaribacter dokdonensis
           MED152
          Length = 1096

 Score = 32.3 bits (70), Expect = 10.0
 Identities = 15/30 (50%), Positives = 23/30 (76%)
 Frame = +1

Query: 160 IGDELFDAASSGDWEKVHELINSKLNENDS 249
           I +E+  ++S G++EK  ELIN ++NENDS
Sbjct: 29  IKEEISQSSSEGNYEKTLELIN-RINENDS 57


>UniRef50_Q8ILW3 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 573

 Score = 32.3 bits (70), Expect = 10.0
 Identities = 21/74 (28%), Positives = 36/74 (48%)
 Frame = +1

Query: 202 EKVHELINSKLNENDSWKPVSAGSVKSLKPIPGGHVYGESEYTFHSSSDINGQKTDKSGG 381
           + + + +N K N N S+   S+ S  +L+   G  +Y +S    H +  IN +  D    
Sbjct: 284 KNISKYMNKKTNSNVSYNIYSSYST-NLRSY-GHEIYNKSNKHTHHNHFINSKCIDNKQN 341

Query: 382 HKIINDDGKVYEFD 423
             II  + K+Y+FD
Sbjct: 342 IIIIETNEKIYKFD 355


>UniRef50_A1CL10 Cluster: Serine/threonine protein kinase, putative;
           n=3; Pezizomycotina|Rep: Serine/threonine protein
           kinase, putative - Aspergillus clavatus
          Length = 832

 Score = 32.3 bits (70), Expect = 10.0
 Identities = 18/61 (29%), Positives = 28/61 (45%)
 Frame = +1

Query: 148 PSFPIGDELFDAASSGDWEKVHELINSKLNENDSWKPVSAGSVKSLKPIPGGHVYGESEY 327
           P  P G E     SS DW++    I+ +   + + KPV+    K ++    GH  GE  Y
Sbjct: 213 PGTPYGLENGPPLSSEDWQERGAAISVRQEIDANGKPVARYIKKGVRDFSFGHTLGEGSY 272

Query: 328 T 330
           +
Sbjct: 273 S 273


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 570,438,703
Number of Sequences: 1657284
Number of extensions: 10647842
Number of successful extensions: 31605
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 30051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31560
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46881492319
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)