Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0376
(634 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone recepto... 29 0.043
AM292360-1|CAL23172.2| 427|Tribolium castaneum gustatory recept... 24 1.2
AM292331-1|CAL23143.2| 437|Tribolium castaneum gustatory recept... 24 1.2
EF222294-1|ABN79654.1| 451|Tribolium castaneum ecdysis triggeri... 22 3.7
EU019709-1|ABU25221.1| 540|Tribolium castaneum aspartate 1-deca... 22 4.9
DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped prot... 21 6.5
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 21 8.6
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 21 8.6
AM292330-1|CAL23142.2| 408|Tribolium castaneum gustatory recept... 21 8.6
AM292323-1|CAL23135.2| 587|Tribolium castaneum gustatory recept... 21 8.6
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 21 8.6
AF243042-1|AAF68438.1| 126|Tribolium castaneum mutant transcrip... 21 8.6
>AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone receptor
(isoform A) protein.
Length = 549
Score = 28.7 bits (61), Expect = 0.043
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Frame = +1
Query: 184 ASSGDWEKVHELIN-SKLNENDSWKPVSAGSVKSLKPIPGGHVYGESEYTFHSSSDINGQ 360
+SSG + + I+ SK D W +G+V L P PG + YT S NG
Sbjct: 83 SSSGPFSSIGGGISASKRQRTDDWLSSPSGNVPPLTPSPGPPSH---PYTVIS----NGY 135
Query: 361 KTD-KSGGHKIINDDGKVYEFDFNP-KVKGY 447
+ SG + + +GK+ D +P + GY
Sbjct: 136 SSPMSSGSYDPYSPNGKIGREDLSPSSLNGY 166
>AM292360-1|CAL23172.2| 427|Tribolium castaneum gustatory receptor
candidate 39 protein.
Length = 427
Score = 23.8 bits (49), Expect = 1.2
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +3
Query: 111 CNSAHRGFRSSGPKFSNR 164
CN H R GP+F R
Sbjct: 330 CNEGHHATRKMGPEFRER 347
>AM292331-1|CAL23143.2| 437|Tribolium castaneum gustatory receptor
candidate 10 protein.
Length = 437
Score = 23.8 bits (49), Expect = 1.2
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +3
Query: 111 CNSAHRGFRSSGPKFSNR 164
CN H R GP+F R
Sbjct: 330 CNEGHHATRKMGPEFRER 347
>EF222294-1|ABN79654.1| 451|Tribolium castaneum ecdysis triggering
hormone receptorisoform B protein.
Length = 451
Score = 22.2 bits (45), Expect = 3.7
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 359 RRPTKAEVTKLSTMTEKSTSS 421
RR K E+T+ ST + TSS
Sbjct: 376 RRKDKREITRKSTSSSTHTSS 396
>EU019709-1|ABU25221.1| 540|Tribolium castaneum aspartate
1-decarboxylase protein.
Length = 540
Score = 21.8 bits (44), Expect = 4.9
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -2
Query: 159 WKTWDRLNGNHDEHCYKNQLH 97
W L G DE YK++LH
Sbjct: 462 WYVPKSLRGRKDEADYKDKLH 482
>DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped
protein.
Length = 126
Score = 21.4 bits (43), Expect = 6.5
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +2
Query: 335 IHRQTSTDRRPTKAEV 382
IH +T TD RP ++
Sbjct: 97 IHERTHTDERPYSCDI 112
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -3
Query: 74 NNQINNKNLGKRGYSYDTY 18
N+Q N N+ GY Y Y
Sbjct: 66 NHQNYNSNVLSNGYGYGNY 84
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -3
Query: 74 NNQINNKNLGKRGYSYDTY 18
N+Q N N+ GY Y Y
Sbjct: 66 NHQNYNSNVLSNGYGYGNY 84
>AM292330-1|CAL23142.2| 408|Tribolium castaneum gustatory receptor
candidate 9 protein.
Length = 408
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -3
Query: 311 YTWPPGIGFKLLTL 270
Y WP G+ KL TL
Sbjct: 126 YGWPKGLNKKLNTL 139
>AM292323-1|CAL23135.2| 587|Tribolium castaneum gustatory receptor
candidate 2 protein.
Length = 587
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -3
Query: 311 YTWPPGIGFKLLTL 270
Y WP G+ KL TL
Sbjct: 126 YGWPKGLNKKLNTL 139
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -3
Query: 74 NNQINNKNLGKRGYSYDTY 18
N+Q N N+ GY Y Y
Sbjct: 66 NHQNYNSNVLSNGYGYGNY 84
>AF243042-1|AAF68438.1| 126|Tribolium castaneum mutant
transcription factor TcDfd1 protein.
Length = 126
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -3
Query: 74 NNQINNKNLGKRGYSYDTY 18
N+Q N N+ GY Y Y
Sbjct: 66 NHQNYNSNVLSNGYGYGNY 84
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,149
Number of Sequences: 336
Number of extensions: 2890
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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