Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0376
         (634 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023504-1|AAY84904.1|  491|Drosophila melanogaster LD22407p pro...    31   1.3  
BT022165-1|AAY51559.1|  491|Drosophila melanogaster IP01327p pro...    31   1.3  
AE014297-2483|AAF55523.2|  491|Drosophila melanogaster CG31241-P...    31   1.3  
AE014296-2529|ABC66140.1|  337|Drosophila melanogaster CG33982-P...    30   2.3  
BT011454-1|AAR99112.1|  558|Drosophila melanogaster RE36948p pro...    29   4.0  
AE014297-2297|AAF55382.1|  968|Drosophila melanogaster CG5208-PA...    29   4.0  
L35153-1|AAA64457.1|  857|Drosophila melanogaster polycomblike n...    29   6.9  
AY075585-1|AAL68389.1| 1043|Drosophila melanogaster SD09488p pro...    29   6.9  
AE013599-2620|AAF57748.2| 1043|Drosophila melanogaster CG5109-PA...    29   6.9  

>BT023504-1|AAY84904.1|  491|Drosophila melanogaster LD22407p
           protein.
          Length = 491

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = +1

Query: 187 SSGDWEKVHELINSKLNENDSWKPVSAGSVKSLK 288
           SS D E  H+L+  + NEN++   V +GSVK  K
Sbjct: 224 SSSDSEDDHDLLTMENNENEALHGVQSGSVKKKK 257


>BT022165-1|AAY51559.1|  491|Drosophila melanogaster IP01327p
           protein.
          Length = 491

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = +1

Query: 187 SSGDWEKVHELINSKLNENDSWKPVSAGSVKSLK 288
           SS D E  H+L+  + NEN++   V +GSVK  K
Sbjct: 224 SSSDSEDDHDLLTMENNENEALHGVQSGSVKKKK 257


>AE014297-2483|AAF55523.2|  491|Drosophila melanogaster CG31241-PA
           protein.
          Length = 491

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = +1

Query: 187 SSGDWEKVHELINSKLNENDSWKPVSAGSVKSLK 288
           SS D E  H+L+  + NEN++   V +GSVK  K
Sbjct: 224 SSSDSEDDHDLLTMENNENEALHGVQSGSVKKKK 257


>AE014296-2529|ABC66140.1|  337|Drosophila melanogaster CG33982-PA
           protein.
          Length = 337

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 17/56 (30%), Positives = 29/56 (51%)
 Frame = +1

Query: 208 VHELINSKLNENDSWKPVSAGSVKSLKPIPGGHVYGESEYTFHSSSDINGQKTDKS 375
           +H L  SK++E +SW P  A S++  +  P    + +S ++ H  S  N  K  +S
Sbjct: 135 IHRLWLSKISEQNSWLPAPANSLQMTRLGPPVLEWPDSLWSAHVHSSNNLVKLTRS 190


>BT011454-1|AAR99112.1|  558|Drosophila melanogaster RE36948p
           protein.
          Length = 558

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +1

Query: 160 IGDELFDAASSGDWEKVHE 216
           + DE F +A +GDWE+ HE
Sbjct: 30  LNDETFGSAINGDWEEAHE 48


>AE014297-2297|AAF55382.1|  968|Drosophila melanogaster CG5208-PA
           protein.
          Length = 968

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +1

Query: 160 IGDELFDAASSGDWEKVHE 216
           + DE F +A +GDWE+ HE
Sbjct: 30  LNDETFGSAINGDWEEAHE 48


>L35153-1|AAA64457.1|  857|Drosophila melanogaster polycomblike
           nuclear protein protein.
          Length = 857

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -1

Query: 199 NLRKRQHQTTHHRLENLGP 143
           NLRK QHQ  HH L ++ P
Sbjct: 587 NLRKHQHQKYHHLLNDIWP 605


>AY075585-1|AAL68389.1| 1043|Drosophila melanogaster SD09488p
           protein.
          Length = 1043

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -1

Query: 199 NLRKRQHQTTHHRLENLGP 143
           NLRK QHQ  HH L ++ P
Sbjct: 587 NLRKHQHQKYHHLLNDIWP 605


>AE013599-2620|AAF57748.2| 1043|Drosophila melanogaster CG5109-PA
           protein.
          Length = 1043

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -1

Query: 199 NLRKRQHQTTHHRLENLGP 143
           NLRK QHQ  HH L ++ P
Sbjct: 587 NLRKHQHQKYHHLLNDIWP 605


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,656,541
Number of Sequences: 53049
Number of extensions: 497515
Number of successful extensions: 1654
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1654
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2641708800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)