Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0374
(611 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 106 2e-23
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 91 5e-19
11_01_0750 - 6315126-6315896,6316371-6316784 87 1e-17
01_06_0824 - 32243495-32244319,32244449-32244859 84 7e-17
11_01_0767 + 6438648-6438809,6439146-6440000 72 3e-13
11_02_0012 - 7346282-7347136,7347234-7347593 65 5e-11
01_01_1152 + 9170628-9171899 63 1e-10
11_02_0014 - 7352619-7352918,7353173-7353418 62 3e-10
11_02_0011 - 7337618-7338496,7338596-7338991 61 8e-10
11_01_0771 + 6453130-6454488 54 1e-07
05_06_0044 - 25150322-25151260 52 4e-07
01_06_0213 + 27580635-27581105,27581206-27581298,27581376-275815... 30 1.3
05_05_0373 - 24478361-24479383 29 2.9
07_01_0464 - 3504264-3504475,3504842-3505031,3505310-3505408,350... 28 6.7
05_01_0488 - 4070506-4072277,4072455-4072557 28 6.7
11_03_0162 - 10956997-10957323,10957390-10957568,10957823-109579... 27 8.9
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 106 bits (254), Expect = 2e-23
Identities = 65/195 (33%), Positives = 110/195 (56%), Gaps = 8/195 (4%)
Frame = +1
Query: 40 KNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKIDERLTSDR 219
K A +N WVE+ T+ IK+++ P S+ T VL NA+YFKGAW+ K D T D
Sbjct: 209 KAAEVASQVNSWVEKVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKDG 268
Query: 220 DFYVSKDKTIKVPMMYKRGDYKYGESAALNAQLIEIPYK--GD--QSSLIVVLPKDKDGI 387
+F++ K+++ P M +Y S N +++++PY+ GD Q S+ ++LP+ +DG+
Sbjct: 269 EFHLLDGKSVQAPFM-STSKKQYILSYD-NLKVLKLPYQQGGDKRQFSMYILLPEAQDGL 326
Query: 388 TQLQEAL-KDPKTLETAQQSMYSTEVDLYLPKFKIETETNLKDVLSNMNVNKIFNNDAQI 564
L E L +P+ LE + T LPKFKI D+L ++ ++ F+++A +
Sbjct: 327 WSLAEKLNSEPEFLEKHIPTRQVTVGQFKLPKFKISFGFEASDLLKSLGLHLPFSSEADL 386
Query: 565 TRLL---KGESLSVS 600
T ++ +G++L VS
Sbjct: 387 TEMVDSPEGKNLFVS 401
Score = 89.8 bits (213), Expect = 1e-18
Identities = 60/199 (30%), Positives = 105/199 (52%), Gaps = 9/199 (4%)
Frame = +1
Query: 7 LQEFGTRIDFSKNTVAAK---SINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKG 177
+QE T + VAA+ +N WV+ T+ IK++ P S++ T VL NA+YFKG
Sbjct: 447 IQEDMTGVVLFVGHVAAEVLGQVNSWVDRVTSGLIKNIATPRSINHNTKLVLANALYFKG 506
Query: 178 AWSSKIDERLTSDRDFYVSKDKTIKVPMMYKRGDYKYGESAALNAQLIEIPY--KGD--Q 345
AW+ K D T D +F++ ++++ P M R K S+ + +++++PY GD Q
Sbjct: 507 AWAEKFDVSKTEDGEFHLLDGESVQAPFMSTR--KKQYLSSYDSLKVLKLPYLQGGDKRQ 564
Query: 346 SSLIVVLPKDKDGITQLQEAL-KDPKTLETAQQSMYSTEVDLY-LPKFKIETETNLKDVL 519
S+ ++LP+ +DG+ L E L +P+ +E M V + LPKFKI +L
Sbjct: 565 FSMYILLPEAQDGLWSLAEKLNSEPEFMEN-HIPMRPVHVGQFKLPKFKISFGFGASGLL 623
Query: 520 SNMNVNKIFNNDAQITRLL 576
+ + +F ++ + ++
Sbjct: 624 KGLGLPLLFGSEVDLIEMV 642
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 91.5 bits (217), Expect = 5e-19
Identities = 57/179 (31%), Positives = 94/179 (52%), Gaps = 5/179 (2%)
Frame = +1
Query: 55 AKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKIDERLTSDRDFYVS 234
A +N WV+ T+ IK+++ P S+ T VL NA+YFKGAW+ K D T D +F +
Sbjct: 6 ASQVNSWVDRVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKDGEFRLL 65
Query: 235 KDKTIKVPMMYKRGDYKYGESAALNAQLIEIPY-KG---DQSSLIVVLPKDKDGITQLQE 402
K++ P M K S+ + +++++PY KG Q S+ ++LP+ +DG+ L
Sbjct: 66 DGKSVLAPFM--STSKKQYLSSYDSLKVLKLPYQKGRDLRQFSMYILLPEAQDGLWSLAA 123
Query: 403 AL-KDPKTLETAQQSMYSTEVDLYLPKFKIETETNLKDVLSNMNVNKIFNNDAQITRLL 576
L +P+ LE + T LPKFKI D+L + + F++ A +T ++
Sbjct: 124 KLNSEPEFLEKRIPTRQVTVGKFKLPKFKISFGFEASDLLKILGLQLPFSSKADLTGMV 182
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 86.6 bits (205), Expect = 1e-17
Identities = 56/198 (28%), Positives = 103/198 (52%), Gaps = 8/198 (4%)
Frame = +1
Query: 25 RIDF-SKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKIDE 201
+ DF +K A IN WV+++T + L+ ++ T VL +A+YF+G W + D
Sbjct: 132 KADFKNKPEDAPDQINSWVKDSTKGTVTTLLPAGTIDQNTGLVLGSALYFRGRWLDRDDL 191
Query: 202 RLTSDRDFYVSKDKTIKVPMMYKRGDYKYGESAAL--NAQLIEIPYKGDQS----SLIVV 363
R T+++ FY +++VP + +Y A+ N ++I++PYK ++ S+ +
Sbjct: 192 RRTTEQKFYCLDGTSVEVPFV----EYDRTRLFAVHDNFKVIKLPYKQGKNERKFSMYIF 247
Query: 364 LPKDKDGITQL-QEALKDPKTLETAQQSMYSTEVDLYLPKFKIETETNLKDVLSNMNVNK 540
LP D DG+ +L Q+ +P LE V + +P FKI + ++KD L +M +
Sbjct: 248 LPDDHDGLFELTQKIFSEPMFLE-QHLPTEKCHVGISVPNFKISFQIDVKDFLKDMGLEL 306
Query: 541 IFNNDAQITRLLKGESLS 594
F +A+ + ++K + S
Sbjct: 307 PFLREAEFSDMIKEDDSS 324
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 84.2 bits (199), Expect = 7e-17
Identities = 56/178 (31%), Positives = 87/178 (48%), Gaps = 13/178 (7%)
Frame = +1
Query: 52 AAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKIDERLTSDRDFYV 231
A + IN+W E T RIKD + D++ AT AVL NA+YFKG W SK D R TSD FY+
Sbjct: 141 ARREINEWFESATAGRIKDFLPKDAVDRATPAVLGNALYFKGDWESKFDARSTSDDVFYL 200
Query: 232 SKDKTIKVPMMYKRGDYKYGESAALNAQLIEIPY----------KGDQSSLIVVLPKDKD 381
+ P M G ++Y A +++ +PY G S+ + LP ++
Sbjct: 201 PDGGHVSAPFM-SSGKWQYIACRA-GYKVLRLPYARGGRGRGRDTGRLFSMYIYLPDERH 258
Query: 382 GI-TQLQEALKDPKTL-ETAQQSMYSTEVDLYL-PKFKIETETNLKDVLSNMNVNKIF 546
G+ L++ DP L E++ V ++ P+F + +TN + L + + F
Sbjct: 259 GLPDMLRKLCSDPAALIESSAALTEKVPVGAFMVPRFTLSYKTNAAETLRQLGLRLPF 316
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 72.1 bits (169), Expect = 3e-13
Identities = 51/190 (26%), Positives = 89/190 (46%), Gaps = 16/190 (8%)
Frame = +1
Query: 28 IDFSKNTVAA-KSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKIDER 204
+DF + V A K IN WV T N I +++ P+S S T V+ NAIYFKG W + D+
Sbjct: 49 VDFKNHPVEARKEINAWVARATKNLITEVIKPESQSVDTRHVVGNAIYFKGEWLAPFDKS 108
Query: 205 LTSDRDFYVSKDKTIKVPMMYKRGDYKYGESAALNAQLIEIPYKGDQS------------ 348
T++R+F +++VP M + + + +++ +PYK
Sbjct: 109 DTAEREFRRLDGSSVEVPFMQRPSGSYHHVACHDGFRVLRLPYKATSDTYNLKLRYSLPS 168
Query: 349 -SLIVVLPKDKDGITQLQEAL-KDPKTLETAQQSMYSTEVDLYLPKFKIE-TETNLKDVL 519
+++V LP D+DG+ L + + P+ ++ +PKFK+ + DVL
Sbjct: 169 FAMLVFLPDDRDGLPGLLDRITASPEFVDEHLPPGCVPVGRFRVPKFKLAFCHYGIADVL 228
Query: 520 SNMNVNKIFN 549
+ + F+
Sbjct: 229 RGLGLRLPFD 238
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 64.9 bits (151), Expect = 5e-11
Identities = 57/226 (25%), Positives = 98/226 (43%), Gaps = 33/226 (14%)
Frame = +1
Query: 31 DFSKNTVAA-KSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKIDERL 207
DF + ++ K IN WV + TN I++++ S+ TA VLVNAIYFKG WS+
Sbjct: 116 DFQRQPKSSRKKINKWVSKATNKLIREILPDGSVHGGTALVLVNAIYFKGKWSNPFPRER 175
Query: 208 TSDRDFYVSKDKTIKVPMMYKRGDYKYGESAALNAQLIEIPY------KGDQS------- 348
T+ F+ ++ P M R D G +++++PY GD
Sbjct: 176 TTTGKFHRLDGSSVDAPFMSSREDQYIGFYDGF--KVLKLPYHRTMKNHGDGGDITPAIL 233
Query: 349 ---------SLIVVLPKDKDGITQLQEALKDPKTLETAQQSMYSTE---------VDLYL 474
S+ + LP +DG+ L + + + TA S DL +
Sbjct: 234 KHYGENVGLSMYIFLPDARDGLPALVDKMAVASS-GTASSSFLRDHRPGRRRIKVGDLRV 292
Query: 475 PKFKIETETNLKDVLSNMNVNKIFN-NDAQITRLLKGESLSVSEAI 609
P+FK+ + + +VL M + F+ ++ ++ GE + V + +
Sbjct: 293 PRFKVSFYSEMNEVLKGMGIGAAFDVGKVDLSGMIDGELVVVEKVM 338
>01_01_1152 + 9170628-9171899
Length = 423
Score = 63.3 bits (147), Expect = 1e-10
Identities = 47/199 (23%), Positives = 90/199 (45%), Gaps = 15/199 (7%)
Frame = +1
Query: 52 AAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKIDERLTSDRDFYV 231
A + +N +V + T I+D++ P+S+ S+T VL NA++FKG WS T F++
Sbjct: 159 ARERVNAFVSDATEGLIRDVLPPNSVDSSTVVVLANAVHFKGTWSLPFHPSATFHAPFHL 218
Query: 232 SKDKTIKVPMMYKRGDYKYGESAALNAQLIEIPYK-------GD----QSSLIVVLPKDK 378
++ P M ++ +A +++PYK GD + +++L D
Sbjct: 219 LDGGAVRAPFMTTEIPFERHVAAFPGFTALKLPYKNVGGGGGGDGVPRAAFYMLLLLPDG 278
Query: 379 DGITQLQE----ALKDPKTLETAQQSMYSTEVDLYLPKFKIETETNLKDVLSNMNVNKIF 546
DG +L + A+ P+ ++ + + L +PKFK + K + + V + F
Sbjct: 279 DGALKLADLYDMAVTTPEFIKKHTPAAEAPVRRLMVPKFKFSFKFEAKSDMRKLGVTRAF 338
Query: 547 NNDAQITRLLKGESLSVSE 603
+ G+ L ++E
Sbjct: 339 AGGDFSGMVTGGDGLFIAE 357
>11_02_0014 - 7352619-7352918,7353173-7353418
Length = 181
Score = 62.5 bits (145), Expect = 3e-10
Identities = 33/94 (35%), Positives = 47/94 (50%)
Frame = +1
Query: 58 KSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKIDERLTSDRDFYVSK 237
K IN+WV + TN I +++ S+ T VLVNAIYFKG WS T+ F+
Sbjct: 88 KKINEWVSKATNKLIPEILPDGSVHRLTTLVLVNAIYFKGKWSDPFPRESTTTGKFHRLD 147
Query: 238 DKTIKVPMMYKRGDYKYGESAALNAQLIEIPYKG 339
++ V M R D G N ++++PY G
Sbjct: 148 GSSVNVRFMRSREDQYIGFYDGFN--VLKLPYNG 179
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 60.9 bits (141), Expect = 8e-10
Identities = 33/92 (35%), Positives = 47/92 (51%)
Frame = +1
Query: 58 KSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKIDERLTSDRDFYVSK 237
K IN WV + TN I +++ S+ TA VLVNAIYFKG WS+ T+ F+
Sbjct: 138 KKINKWVSKATNKLIPEILPDGSVHVDTALVLVNAIYFKGKWSNPFPRSSTTTGKFHRLD 197
Query: 238 DKTIKVPMMYKRGDYKYGESAALNAQLIEIPY 333
++ VP M R D G ++++PY
Sbjct: 198 GSSVDVPFMSSREDQYIGFHDGFT--VLKLPY 227
>11_01_0771 + 6453130-6454488
Length = 452
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/59 (44%), Positives = 31/59 (52%)
Frame = +1
Query: 52 AAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKIDERLTSDRDFY 228
A K IN W T I D++ P S+ TA VL NAIYFKG W +E T + FY
Sbjct: 173 ARKQINAWARRATGKLITDVLPPRSVGPETAVVLGNAIYFKGKWDRPFNESDTERKPFY 231
>05_06_0044 - 25150322-25151260
Length = 312
Score = 52.0 bits (119), Expect = 4e-07
Identities = 45/200 (22%), Positives = 85/200 (42%), Gaps = 23/200 (11%)
Frame = +1
Query: 16 FGTRIDFSKNTVAAKS-INDWVEENTNNRIKDLVN------PDSLSSATAAV-----LVN 159
F + + N AA++ IN+W T +KD+++ D A+ L N
Sbjct: 23 FKAAVRSAGNPAAARAEINEWFSSQTGGFVKDILSNSIDDDDDGSGGGGGAISASVFLAN 82
Query: 160 AIYFKGAWSSKIDERLTSDRDFYVSKDKTIKVPMMYKRGDYKYGE-SAALNAQLIEIPYK 336
++YF W LT + DF+VS D ++VP M + + + ++ + Y+
Sbjct: 83 SLYFNAYWDHPFFPHLTEEGDFHVSPDHDVRVPFMAGSHQHAFMDVGCHPGFNVLRMMYR 142
Query: 337 ------GDQS-SLIVVLPKDKDGITQLQEAL-KDPKTL--ETAQQSMYSTEVDLYLPKFK 486
GD+ ++ + LP D+DG+ +L L +P T + +L +PKF+
Sbjct: 143 TGGAAGGDKMFAMYIYLPDDRDGLPELARKLASNPAAFLRRTIVPAQPVAVGELKIPKFE 202
Query: 487 IETETNLKDVLSNMNVNKIF 546
+ + +L ++ F
Sbjct: 203 VSLKVEASRLLREFGLDLPF 222
>01_06_0213 +
27580635-27581105,27581206-27581298,27581376-27581540,
27581640-27581862,27582329-27582429,27582666-27582713,
27583086-27583172,27583745-27583879,27583985-27584140,
27585336-27585545,27585641-27586351,27586429-27586974,
27587872-27588495,27588595-27588699,27590460-27590711,
27590939-27591766
Length = 1584
Score = 30.3 bits (65), Expect = 1.3
Identities = 23/93 (24%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
Frame = +1
Query: 172 KGAWSSKIDERLTSD--RDFYVSKDKTIKVPMMYKRGDYKYGESAALNAQLIEIPYKGDQ 345
KG ++ ER+ RD SK + R D K E A + ++ PY+ D
Sbjct: 551 KGLTILEVAERIQKSGLRDLTTSKTPEASIAAALSR-DTKLFERTAPSTYCVKSPYRKDP 609
Query: 346 SSLIVVLPKDKDGITQLQEALKDPKTLETAQQS 444
+ VVL ++ I Q + D + + A +
Sbjct: 610 ADSEVVLSSAREKIRAFQNVISDSEAEKEANDA 642
>05_05_0373 - 24478361-24479383
Length = 340
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +1
Query: 49 VAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLV 156
VA + +DW E + ++ D V PD+LSS AAV +
Sbjct: 153 VALREPHDWGESTAHAQL-DAVAPDALSSCDAAVFL 187
>07_01_0464 -
3504264-3504475,3504842-3505031,3505310-3505408,
3505561-3505653,3505926-3506891,3507267-3507485,
3508038-3508247,3508371-3508630,3508956-3510737,
3510796-3511009
Length = 1414
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +1
Query: 418 KTLETAQQSMYSTEVDLYLP-KFKIETETNL 507
K +E A Q +YSTEV+L+ F +ET+T L
Sbjct: 809 KGMEEADQKIYSTEVNLHSQYYFYMETQTAL 839
>05_01_0488 - 4070506-4072277,4072455-4072557
Length = 624
Score = 27.9 bits (59), Expect = 6.7
Identities = 18/75 (24%), Positives = 39/75 (52%)
Frame = +1
Query: 292 ESAALNAQLIEIPYKGDQSSLIVVLPKDKDGITQLQEALKDPKTLETAQQSMYSTEVDLY 471
E+++L L E+ K ++ +L V+ +KD I +L+E++ + + TE+D
Sbjct: 229 ETSSLQKDLDEV--KSEKEALEAVVLVNKDEIDRLKESMVSAAKQFEVELAHRDTEIDKC 286
Query: 472 LPKFKIETETNLKDV 516
+ ++ +E L D+
Sbjct: 287 KQELEVLSEKYLHDI 301
>11_03_0162 -
10956997-10957323,10957390-10957568,10957823-10957922,
10959333-10959397,10959480-10959572,10961062-10961607,
10961627-10961678,10961753-10961884,10963049-10963210,
10963532-10963582
Length = 568
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/61 (21%), Positives = 27/61 (44%)
Frame = +1
Query: 46 TVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKIDERLTSDRDF 225
+ + + W TN+R + + + +NA +++ AWS D+ + +DF
Sbjct: 283 SASGNGTDQWRRVPTNDRTRVSASATNFGLEEGPDGLNATFYRSAWSWIKDDLMALIQDF 342
Query: 226 Y 228
Y
Sbjct: 343 Y 343
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.311 0.129 0.351
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,194,784
Number of Sequences: 37544
Number of extensions: 264227
Number of successful extensions: 446
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 430
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 436
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1466594128
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
- SilkBase 1999-2023 -