Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0372
         (618 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023959-1|ABB36463.1|  876|Drosophila melanogaster AT19777p pro...    28   8.8  
AE014134-544|AAF51156.1|  874|Drosophila melanogaster CG17258-PA...    28   8.8  

>BT023959-1|ABB36463.1|  876|Drosophila melanogaster AT19777p
           protein.
          Length = 876

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 19/48 (39%), Positives = 27/48 (56%)
 Frame = +3

Query: 474 ERYRRKQGRSSAATETRVWRSSA*LQRAPQF*RQQPGRCRASRSTKTT 617
           E+  R+QG+S  A +TRV + +A L +  Q  R+Q     A  S KTT
Sbjct: 457 EKIEREQGQSCLARDTRVQKINAFLDKVRQEKRRQRTETVAETS-KTT 503


>AE014134-544|AAF51156.1|  874|Drosophila melanogaster CG17258-PA
           protein.
          Length = 874

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 19/48 (39%), Positives = 27/48 (56%)
 Frame = +3

Query: 474 ERYRRKQGRSSAATETRVWRSSA*LQRAPQF*RQQPGRCRASRSTKTT 617
           E+  R+QG+S  A +TRV + +A L +  Q  R+Q     A  S KTT
Sbjct: 455 EKIEREQGQSCQARDTRVQKINAFLDKVRQEKRRQRTETVAETS-KTT 501


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.313    0.133    0.379 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,409,299
Number of Sequences: 53049
Number of extensions: 447840
Number of successful extensions: 566
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 566
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2538517050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)