Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0371
(672 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q2F6A5 Cluster: Elongation protein 4-like protein; n=1;... 408 e-113
UniRef50_UPI0000519EA2 Cluster: PREDICTED: similar to elongation... 128 9e-29
UniRef50_A7S8W5 Cluster: Predicted protein; n=1; Nematostella ve... 124 1e-27
UniRef50_Q17D33 Cluster: Pax neighbour protein; n=2; Culicidae|R... 122 1e-26
UniRef50_UPI0000D555B9 Cluster: PREDICTED: similar to elongation... 115 1e-24
UniRef50_A2IDB3 Cluster: Elongation protein 4 homolog; n=11; Eut... 114 2e-24
UniRef50_Q96EB1 Cluster: Elongator complex protein 4; n=28; Eute... 114 2e-24
UniRef50_Q9VMQ7 Cluster: Putative elongator complex protein 4; n... 101 1e-20
UniRef50_Q5DBL9 Cluster: SJCHGC00647 protein; n=3; Schistosoma j... 87 3e-16
UniRef50_Q4W0V9 Cluster: Elongator component; n=5; Magnoliophyta... 75 1e-12
UniRef50_Q18195 Cluster: Putative elongator complex protein 4; n... 75 1e-12
UniRef50_Q54XS0 Cluster: RNA polymerase II elongator complex sub... 74 4e-12
UniRef50_Q8W4Q0 Cluster: AT3g11220/F11B9_116; n=1; Arabidopsis t... 73 6e-12
UniRef50_Q1EPK3 Cluster: Paxneb-related protein; n=1; Musa acumi... 66 6e-10
UniRef50_Q9USP1 Cluster: RNA polymerase II elongator complex sub... 66 6e-10
UniRef50_A1DE76 Cluster: PAXNEB protein superfamily; n=5; Pezizo... 65 1e-09
UniRef50_Q2UE77 Cluster: RNA polymerase II elongator complex; n=... 64 4e-09
UniRef50_A4RHK2 Cluster: Putative uncharacterized protein; n=3; ... 56 1e-06
UniRef50_A2YFG1 Cluster: Putative uncharacterized protein; n=3; ... 54 3e-06
UniRef50_Q0W4S2 Cluster: Putative uncharacterized protein; n=1; ... 51 3e-05
UniRef50_Q6C0T6 Cluster: Similar to tr|Q02884 Saccharomyces cere... 50 4e-05
UniRef50_UPI000023D6AB Cluster: hypothetical protein FG04274.1; ... 49 9e-05
UniRef50_A4G1Y6 Cluster: Putative uncharacterized protein; n=1; ... 44 0.004
UniRef50_Q5JES3 Cluster: ATPase, RecA superfamily; n=1; Thermoco... 42 0.010
UniRef50_O29896 Cluster: Putative uncharacterized protein; n=1; ... 41 0.031
UniRef50_Q55JE8 Cluster: Putative uncharacterized protein; n=2; ... 40 0.041
UniRef50_O29732 Cluster: Putative uncharacterized protein; n=1; ... 40 0.041
UniRef50_Q4PGP1 Cluster: Putative uncharacterized protein; n=1; ... 39 0.13
UniRef50_Q8D8I8 Cluster: RecA/RadA recombinase; n=4; Vibrio|Rep:... 37 0.39
UniRef50_A4SAZ1 Cluster: Predicted protein; n=2; Ostreococcus|Re... 37 0.51
UniRef50_Q12XV7 Cluster: KaiC; n=1; Methanococcoides burtonii DS... 37 0.51
UniRef50_A0GFK5 Cluster: RAD55; n=2; Burkholderia|Rep: RAD55 - B... 36 0.67
UniRef50_UPI00006CB1E6 Cluster: hypothetical protein TTHERM_0030... 36 0.89
UniRef50_Q6LUG7 Cluster: DNA repair protein radA; n=7; Proteobac... 36 0.89
UniRef50_Q2IEE4 Cluster: Protein recA; n=1; Anaeromyxobacter deh... 36 1.2
UniRef50_Q6CLZ1 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 35 2.1
UniRef50_Q02884 Cluster: Elongator complex protein 4; n=2; Sacch... 35 2.1
UniRef50_A0E5J0 Cluster: Chromosome undetermined scaffold_8, who... 34 2.7
UniRef50_Q2UF97 Cluster: Predicted protein; n=1; Aspergillus ory... 34 2.7
UniRef50_UPI0000E0F49C Cluster: hypothetical 5-formyltetrahydrof... 34 3.6
UniRef50_Q17CU0 Cluster: Putative uncharacterized protein; n=1; ... 34 3.6
UniRef50_Q64C90 Cluster: Predicted ATP-dependent serine protease... 34 3.6
UniRef50_A2SRJ6 Cluster: RecA-superfamily ATPase implicated in s... 34 3.6
UniRef50_Q0RBD5 Cluster: Putative uncharacterized protein; n=1; ... 33 4.8
UniRef50_Q08XB9 Cluster: KaiC domain protein; n=1; Stigmatella a... 33 4.8
UniRef50_Q5A2U1 Cluster: Putative uncharacterized protein RAD57;... 33 4.8
UniRef50_A2QYI6 Cluster: Similarity: Most weak blast hits are ca... 33 4.8
UniRef50_Q8TQM7 Cluster: Putative uncharacterized protein; n=1; ... 33 4.8
UniRef50_Q9RVC4 Cluster: DNA repair protein radA; n=4; Deinococc... 33 6.3
UniRef50_A1WPH7 Cluster: Tfp pilus assembly protein tip-associat... 33 6.3
UniRef50_A2BKD6 Cluster: Universally conserved protein; n=1; Hyp... 33 6.3
UniRef50_P38450 Cluster: Uncharacterized mitochondrial protein y... 33 6.3
UniRef50_UPI0000585167 Cluster: PREDICTED: similar to endonuclea... 33 8.3
UniRef50_Q5XDA1 Cluster: Putative uncharacterized protein; n=12;... 33 8.3
UniRef50_Q8ZXQ7 Cluster: Putative uncharacterized protein PAE115... 33 8.3
UniRef50_Q58527 Cluster: Uncharacterized protein MJ1127; n=6; Me... 33 8.3
UniRef50_A6F242 Cluster: Probable beta-lactamase; n=1; Marinobac... 26 9.3
>UniRef50_Q2F6A5 Cluster: Elongation protein 4-like protein; n=1;
Bombyx mori|Rep: Elongation protein 4-like protein -
Bombyx mori (Silk moth)
Length = 369
Score = 408 bits (1004), Expect = e-113
Identities = 191/192 (99%), Positives = 191/192 (99%)
Frame = +2
Query: 95 MRSFRKFIDISTHINGTKVKNNLPYVSSGIPSLDHIVGGGIPAGSIFVVEEDVLGVYSKV 274
MRSFRKFIDISTHINGTKVKNNLPYVSSGIPSLDHIVGGGIPAGSIFVVEEDVLGVYSKV
Sbjct: 1 MRSFRKFIDISTHINGTKVKNNLPYVSSGIPSLDHIVGGGIPAGSIFVVEEDVLGVYSKV 60
Query: 275 LFKYFIAEGVACDHELFVTSLDEDPHKITSELPQPCALPPEDEKAPSTDAEKMKIAWRYE 454
LFKYFIAEGVACDHELFVTSLDEDPHKITSELPQPCALPPEDEKAPSTDAEKMKIAWRYE
Sbjct: 61 LFKYFIAEGVACDHELFVTSLDEDPHKITSELPQPCALPPEDEKAPSTDAEKMKIAWRYE 120
Query: 455 GLSQVESSFGSNTNFGHNFDLSRYIDADTIEKSKIQYGTTTWQDSTLSWQTTMRRGKLKS 634
GLSQVESSFGSNTN GHNFDLSRYIDADTIEKSKIQYGTTTWQDSTLSWQTTMRRGKLKS
Sbjct: 121 GLSQVESSFGSNTNLGHNFDLSRYIDADTIEKSKIQYGTTTWQDSTLSWQTTMRRGKLKS 180
Query: 635 ALFHKLLRNIYE 670
ALFHKLLRNIYE
Sbjct: 181 ALFHKLLRNIYE 192
>UniRef50_UPI0000519EA2 Cluster: PREDICTED: similar to elongation
protein 4 homolog; n=2; Apocrita|Rep: PREDICTED: similar
to elongation protein 4 homolog - Apis mellifera
Length = 364
Score = 128 bits (310), Expect = 9e-29
Identities = 66/155 (42%), Positives = 97/155 (62%), Gaps = 2/155 (1%)
Frame = +2
Query: 134 INGTK--VKNNLPYVSSGIPSLDHIVGGGIPAGSIFVVEEDVLGVYSKVLFKYFIAEGVA 307
I+GTK +KN+ VSSGIPSLD+I+GGG+P GS+F++EED G+Y+KV+ +YF+AEGV
Sbjct: 14 ISGTKPSLKNSQLLVSSGIPSLDYIIGGGLPIGSLFLIEEDRYGIYAKVMLQYFMAEGVV 73
Query: 308 CDHELFVTSLDEDPHKITSELPQPCALPPEDEKAPSTDAEKMKIAWRYEGLSQVESSFGS 487
L + S D + SE+P P+ PS E+MKIAWRY+ + ++ S
Sbjct: 74 TAQPLLIGSKDIKTSHLVSEMP-AVITDPKSIDEPSNSDEQMKIAWRYQNMKAIDPSPIG 132
Query: 488 NTNFGHNFDLSRYIDADTIEKSKIQYGTTTWQDST 592
FGH +DL++ ++ + IEK+ I T W D +
Sbjct: 133 GQFFGHFYDLTKTMEKEVIEKADI----TQWYDDS 163
>UniRef50_A7S8W5 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 275
Score = 124 bits (300), Expect = 1e-27
Identities = 70/182 (38%), Positives = 105/182 (57%), Gaps = 5/182 (2%)
Frame = +2
Query: 134 INGTK--VKNNLPYVSSGIPSLDHIVGGGIPAGSIFVVEEDVLGVYSKVLFKYFIAEGVA 307
I GT+ + NN VS+GIPSLD ++GGGI G++ +VEED+ G Y++ L KYF+AEG+
Sbjct: 17 IPGTRPSIHNNQLLVSTGIPSLDSVIGGGIAVGTVLLVEEDIYGSYARQLLKYFLAEGIV 76
Query: 308 CDHELFVTSLDEDPHKITSELPQPCALPPEDE---KAPSTDAEKMKIAWRYEGLSQVESS 478
H LF+ S + +P I +LP P + E P E MKIAWRY+ L +V+SS
Sbjct: 77 SGHSLFLASAELEPSAILKDLPYPMNEEDDSEPGLSTPGRQEESMKIAWRYQQLPKVQSS 136
Query: 479 FGSNTNFGHNFDLSRYIDADTIEKSKIQYGTTTWQDSTLSWQTTMRRGKLKSALFHKLLR 658
+NF H FDL+R + + + I TT+ D+T W +++ L+ KL+
Sbjct: 137 LAC-SNFSHYFDLTRVMKEPRVHRLPI----TTF-DATSEWSE-----GIQNPLYEKLIS 185
Query: 659 NI 664
++
Sbjct: 186 SL 187
>UniRef50_Q17D33 Cluster: Pax neighbour protein; n=2; Culicidae|Rep:
Pax neighbour protein - Aedes aegypti (Yellowfever
mosquito)
Length = 370
Score = 122 bits (293), Expect = 1e-26
Identities = 66/147 (44%), Positives = 86/147 (58%), Gaps = 3/147 (2%)
Frame = +2
Query: 134 INGTKVK--NNLPYVSSGIPSLDHIVGGGIPAGSIFVVEEDVLGVYSKVLFKYFIAEGVA 307
I GT+ + +SSG PSLDH+ GGG P GSI +EED YS+VL KYF+AEG+
Sbjct: 13 IKGTRASLHSGQAILSSGNPSLDHVFGGGFPIGSIIAIEEDKYANYSRVLTKYFLAEGLI 72
Query: 308 CDHELFVTSLDEDPHKITSELPQPCALPPEDEKAPSTDA-EKMKIAWRYEGLSQVESSFG 484
H FV SL+ED ++ +LP P E E+ P A E+M+IA+RY L V+
Sbjct: 73 NSHSTFVASLEEDSVQLMKKLPTP-VKETEPERTPQNQAPEEMRIAFRYNKLGVVDLEQK 131
Query: 485 SNTNFGHNFDLSRYIDADTIEKSKIQY 565
S+T GH FDLS+ ID + K I Y
Sbjct: 132 SSTQLGHFFDLSKQIDESELTKHDITY 158
>UniRef50_UPI0000D555B9 Cluster: PREDICTED: similar to elongation
protein 4 homolog; n=1; Tribolium castaneum|Rep:
PREDICTED: similar to elongation protein 4 homolog -
Tribolium castaneum
Length = 1455
Score = 115 bits (276), Expect = 1e-24
Identities = 57/132 (43%), Positives = 81/132 (61%), Gaps = 1/132 (0%)
Frame = +2
Query: 173 SSGIPSLDHIVGGGIPAGSIFVVEEDVLGVYSKVLFKYFIAEGVACDHELFVTSLDEDPH 352
SSGI SLD I+GGG+P G++ ++EED+ G ++K++ YF+AEG+ H V S D +P+
Sbjct: 34 SSGIHSLDSILGGGLPVGTVSIIEEDIYGSHAKIMLDYFLAEGIVSKHSTLVASFDTNPY 93
Query: 353 KITSELPQPCALPPEDEKAPS-TDAEKMKIAWRYEGLSQVESSFGSNTNFGHNFDLSRYI 529
I LP PE+ S T +EKMKIA+RY+ L E + + GHNFDLS+ +
Sbjct: 94 DIIKNLPAVITNDPEECPIRSETSSEKMKIAFRYQNLPTAEK---ESYSIGHNFDLSKSM 150
Query: 530 DADTIEKSKIQY 565
+ IE S I Y
Sbjct: 151 SLEDIENSDICY 162
>UniRef50_A2IDB3 Cluster: Elongation protein 4 homolog; n=11;
Eutheria|Rep: Elongation protein 4 homolog - Homo
sapiens (Human)
Length = 531
Score = 114 bits (274), Expect = 2e-24
Identities = 62/151 (41%), Positives = 92/151 (60%), Gaps = 11/151 (7%)
Frame = +2
Query: 134 INGTK--VKNNLPYVSSGIPSLDHIVGGGIPAGSIFVVEEDVLGVYSKVLFKYFIAEGVA 307
I GT+ V+N VS+G+P+LD ++GGG+ G++ ++EED +YS +LFKYF+AEG+
Sbjct: 49 IAGTRPSVRNGQLLVSTGLPALDQLLGGGLAVGTVLLIEEDKYNIYSPLLFKYFLAEGIV 108
Query: 308 CDHELFVTSLDEDPHKITSELPQP-----CALPPEDE----KAPSTDAEKMKIAWRYEGL 460
H L V S EDP I ELP P C +++ K P ++ KMKIAWRY+ L
Sbjct: 109 NGHTLLVASAKEDPANILQELPAPLLDDKCKKEFDEDVYNHKTPESNI-KMKIAWRYQLL 167
Query: 461 SQVESSFGSNTNFGHNFDLSRYIDADTIEKS 553
++E S++ FGH +D S+ + + IE S
Sbjct: 168 PKMEIGPVSSSRFGHYYDASKRMPQELIEAS 198
>UniRef50_Q96EB1 Cluster: Elongator complex protein 4; n=28;
Euteleostomi|Rep: Elongator complex protein 4 - Homo
sapiens (Human)
Length = 424
Score = 114 bits (274), Expect = 2e-24
Identities = 62/151 (41%), Positives = 92/151 (60%), Gaps = 11/151 (7%)
Frame = +2
Query: 134 INGTK--VKNNLPYVSSGIPSLDHIVGGGIPAGSIFVVEEDVLGVYSKVLFKYFIAEGVA 307
I GT+ V+N VS+G+P+LD ++GGG+ G++ ++EED +YS +LFKYF+AEG+
Sbjct: 49 IAGTRPSVRNGQLLVSTGLPALDQLLGGGLAVGTVLLIEEDKYNIYSPLLFKYFLAEGIV 108
Query: 308 CDHELFVTSLDEDPHKITSELPQP-----CALPPEDE----KAPSTDAEKMKIAWRYEGL 460
H L V S EDP I ELP P C +++ K P ++ KMKIAWRY+ L
Sbjct: 109 NGHTLLVASAKEDPANILQELPAPLLDDKCKKEFDEDVYNHKTPESNI-KMKIAWRYQLL 167
Query: 461 SQVESSFGSNTNFGHNFDLSRYIDADTIEKS 553
++E S++ FGH +D S+ + + IE S
Sbjct: 168 PKMEIGPVSSSRFGHYYDASKRMPQELIEAS 198
>UniRef50_Q9VMQ7 Cluster: Putative elongator complex protein 4; n=2;
Sophophora|Rep: Putative elongator complex protein 4 -
Drosophila melanogaster (Fruit fly)
Length = 437
Score = 101 bits (243), Expect = 1e-20
Identities = 66/173 (38%), Positives = 93/173 (53%), Gaps = 8/173 (4%)
Frame = +2
Query: 95 MRSFRKFIDISTHINGTKVKNNLPYV--SSGIPSLDHIVGGGIPAGSIFVVEEDVLGVYS 268
M SFRK + I GT+ + V SSG P LD ++GGG+P GSI ++EED ++
Sbjct: 1 MTSFRKRT-VQKPIRGTRTSPHTAQVITSSGNPYLDVVIGGGLPMGSICLIEEDRFMTHA 59
Query: 269 KVLFKYFIAEGVACDHELFVTSLDEDPHKITSELPQPCALPPEDEKAP-----STDAEK- 430
KVL KYF+AEGV E+F+ SLD+ P ++ LP+P E++ AE
Sbjct: 60 KVLAKYFLAEGVISKQEIFLGSLDDIPAEMLRRLPRPLTDQESMEQSEVQALGDAGAENG 119
Query: 431 MKIAWRYEGLSQVESSFGSNTNFGHNFDLSRYIDADTIEKSKIQYGTTTWQDS 589
++IAWRY L V S + GH+F+L +D+ + K TT W DS
Sbjct: 120 LRIAWRYNDLPLVNSEH-ATAKIGHHFNLMEQMDSMMLYNVK----TTLWDDS 167
>UniRef50_Q5DBL9 Cluster: SJCHGC00647 protein; n=3; Schistosoma
japonicum|Rep: SJCHGC00647 protein - Schistosoma
japonicum (Blood fluke)
Length = 340
Score = 87.4 bits (207), Expect = 3e-16
Identities = 54/163 (33%), Positives = 90/163 (55%), Gaps = 3/163 (1%)
Frame = +2
Query: 134 INGTKVKNNLP--YVSSGIPSLDHIVGGGIPAGSIFVVEEDVLGVYSKVLFKYFIAEGVA 307
+NG K L +S+GIPS D ++GGG+ +GSI +VE D Y+K L F+AEG+
Sbjct: 1 MNGVKRSFKLSTFLISTGIPSFDELLGGGVASGSIILVEPDFHQTYAKQLLNLFVAEGIL 60
Query: 308 CDHELFVTSLDEDPHKITSELPQPCALPPEDEKAPSTDAEKMKIAWRYEGLSQVESSFGS 487
H +F E ++ +LP P ++ +TD +KIAWRY+ +S ++
Sbjct: 61 SGHSVFY-GATETLDRLLRKLPDNIT-PVDEVNEETTD---LKIAWRYQNVSNTKNLNHF 115
Query: 488 NTNFGHNFDLSRYIDADTIEKSKIQYGTTTWQ-DSTLSWQTTM 613
+N GH+F+++ +DA + S+ T+++Q DS + QT +
Sbjct: 116 TSNLGHHFNMTIPMDA-AAQISEKNVSTSSFQPDSKKTLQTNL 157
>UniRef50_Q4W0V9 Cluster: Elongator component; n=5;
Magnoliophyta|Rep: Elongator component - Arabidopsis
thaliana (Mouse-ear cress)
Length = 355
Score = 75.4 bits (177), Expect = 1e-12
Identities = 45/148 (30%), Positives = 76/148 (51%), Gaps = 4/148 (2%)
Frame = +2
Query: 101 SFRKFIDI--STHINGTKV-KNNLPYVSSGIPSLDHIVGGGIPAGSIFVVEEDVLGVYSK 271
SF + I + S I G K N ++SSGI LD I+GGG P GS+ +V ED +
Sbjct: 11 SFSRNISVVSSPQIPGLKSGPNGTAFISSGIRDLDRILGGGYPLGSLVMVMEDPEAPHHM 70
Query: 272 VLFKYFIAEGVACDHELFVTSLDEDPHKITSELPQPCALPPEDEKAPSTD-AEKMKIAWR 448
L + F+++G+ + L S +DP LP P + + AP D E ++IAW+
Sbjct: 71 DLLRTFMSQGLVNNQPLLYASPSKDPKGFLGTLPHPASSKEDKPTAPDPDQGESLRIAWQ 130
Query: 449 YEGLSQVESSFGSNTNFGHNFDLSRYID 532
Y +E+ + ++ ++FD+ + ++
Sbjct: 131 YR--KYLENQKNAIDDYSNDFDMRKPLE 156
>UniRef50_Q18195 Cluster: Putative elongator complex protein 4; n=2;
Caenorhabditis|Rep: Putative elongator complex protein 4
- Caenorhabditis elegans
Length = 334
Score = 75.4 bits (177), Expect = 1e-12
Identities = 42/145 (28%), Positives = 73/145 (50%), Gaps = 4/145 (2%)
Frame = +2
Query: 125 STHINGTKVKNNLPYVSSGIPSLDHIVGGGIPAGSIFVVEEDVLGVYSKVLFKYFIAEGV 304
S I G K L SSG S D ++GG + SI +++E Y L + F+AEG+
Sbjct: 7 SVQIAGCSTKKRLLETSSGCDSFDTLIGGALVNSSIVLIDEYRSRCYGSYLIRSFLAEGL 66
Query: 305 ACDHELFVTSLDEDPHKITSELPQPCALPPEDEKAPST----DAEKMKIAWRYEGLSQVE 472
H F+ EDP +I + + ++++ P++ + MKIAWRY + QV
Sbjct: 67 HHGHRCFIADPTEDPKEINLIPSRRTSTDMQNQEIPNSLPAENENSMKIAWRYGNVKQVS 126
Query: 473 SSFGSNTNFGHNFDLSRYIDADTIE 547
SS G +N + +D +++++ ++
Sbjct: 127 SSLGPLSN-ENQYDFTKHVENPNVD 150
>UniRef50_Q54XS0 Cluster: RNA polymerase II elongator complex
subunit; n=1; Dictyostelium discoideum AX4|Rep: RNA
polymerase II elongator complex subunit - Dictyostelium
discoideum AX4
Length = 439
Score = 73.7 bits (173), Expect = 4e-12
Identities = 56/170 (32%), Positives = 84/170 (49%), Gaps = 29/170 (17%)
Frame = +2
Query: 137 NGTKV--KNNLPYVSSGIPSLDHIVGGGIPAGSIFVVEEDVLGVYSKVLFKYFIAEGVAC 310
NG K+ KN+ S+G+ LD I+GGGIP GSI ++EED+ Y L KYF+AEGV
Sbjct: 48 NGCKISIKNSNLLTSTGLTDLDDIIGGGIPIGSILMIEEDINSSYYMFLLKYFLAEGVLQ 107
Query: 311 DHELFVTSL-DEDPHKITSELPQPCALPPEDE--KAPSTD---------------AEKMK 436
+F +SL DP +I ++LP E E K +T+ +++K
Sbjct: 108 QQGVFFSSLIGIDPFEILNKLPARITKEEEIEADKNDTTNNINTNINTNNNNKQPTDELK 167
Query: 437 IAWRYEGL---------SQVESSFGSNTNFGHNFDLSRYIDADTIEKSKI 559
IAWRY+ Q +S N F H++D +R ++ ++ I
Sbjct: 168 IAWRYQQYVSNELSKQQQQQSASTIMNQTFCHSYDFTRKMNVQSMNPELI 217
>UniRef50_Q8W4Q0 Cluster: AT3g11220/F11B9_116; n=1; Arabidopsis
thaliana|Rep: AT3g11220/F11B9_116 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 243
Score = 72.9 bits (171), Expect = 6e-12
Identities = 37/127 (29%), Positives = 67/127 (52%), Gaps = 1/127 (0%)
Frame = +2
Query: 155 NNLPYVSSGIPSLDHIVGGGIPAGSIFVVEEDVLGVYSKVLFKYFIAEGVACDHELFVTS 334
N ++SSGI LD I+GGG P GS+ +V ED + L + ++++G+ + L S
Sbjct: 32 NGTAFISSGIRDLDRILGGGYPLGSLVMVMEDPEAPHHMDLLRTYMSQGLVNNQPLLYAS 91
Query: 335 LDEDPHKITSELPQPCALPPEDEKAPSTD-AEKMKIAWRYEGLSQVESSFGSNTNFGHNF 511
+DP LP P + + AP D E ++IAW+Y +E+ + ++ ++F
Sbjct: 92 PSKDPKGFLGTLPHPASSKEDKPTAPDPDQGESLRIAWQYR--KYLENQKNAIDDYSNDF 149
Query: 512 DLSRYID 532
D+ + ++
Sbjct: 150 DMRKPLE 156
>UniRef50_Q1EPK3 Cluster: Paxneb-related protein; n=1; Musa
acuminata|Rep: Paxneb-related protein - Musa acuminata
(Banana)
Length = 291
Score = 66.5 bits (155), Expect = 6e-10
Identities = 47/149 (31%), Positives = 73/149 (48%), Gaps = 12/149 (8%)
Frame = +2
Query: 155 NNLPYVSSGIPSLDHIVGGGIPAGSIFVVEEDVLGVYSKVLFKYFIAEGVACDHELFVTS 334
N +VSSGIP LD I+GGG GS+ +V ED + +L + F+++GV + S
Sbjct: 44 NGATFVSSGIPDLDRILGGGFLLGSLVMVMEDADAPHHLLLLRNFMSQGVVHRQPVLFAS 103
Query: 335 LDEDPHKITSELPQPCALPPEDEKAPS------TDAEK-MKIAWRYEG-LSQVESSFGSN 490
DP LP P + E + + D EK ++IAW+Y+ +SS N
Sbjct: 104 PLRDPRAFLGTLPSPVSSSKEHRQRDTLVDHNQQDQEKGLRIAWQYKKYFGDQQSSQNHN 163
Query: 491 TN----FGHNFDLSRYIDADTIEKSKIQY 565
+ F ++FDL + T+E+ +QY
Sbjct: 164 RDVKQEFSNDFDLRK-----TLERQHVQY 187
>UniRef50_Q9USP1 Cluster: RNA polymerase II elongator complex
subunit Elp4; n=1; Schizosaccharomyces pombe|Rep: RNA
polymerase II elongator complex subunit Elp4 -
Schizosaccharomyces pombe (Fission yeast)
Length = 361
Score = 66.5 bits (155), Expect = 6e-10
Identities = 50/148 (33%), Positives = 79/148 (53%), Gaps = 14/148 (9%)
Frame = +2
Query: 173 SSGIPSLDHIVGGGIPAGSIFVVEEDVLGVYSKVLFKYFIAEGVACDHELFV-TSLDEDP 349
SSG S D+ + GGIP S+ V+EED + Y+ VL K+F AEG+ DH +++ S+ E
Sbjct: 32 SSGSSSFDYYLSGGIPMKSLLVIEEDSMD-YASVLLKFFAAEGLKQDHVIWLGPSIGEMW 90
Query: 350 HKITSELPQPCALPPEDEKAPSTD-----------AEKMKIAWRYEGLSQVESSFGS--N 490
+ +LP P ++E + D E+MKIAWRYE +S+ ++
Sbjct: 91 FR---QLPGDSDRPNKNENSAGEDNHSSPPSKNPQQERMKIAWRYEQVSKTKAPTLDMIP 147
Query: 491 TNFGHNFDLSRYIDADTIEKSKIQYGTT 574
+ H+FDLS+ + I KS ++Y +
Sbjct: 148 PGYTHSFDLSK----NLIVKSDMKYAVS 171
>UniRef50_A1DE76 Cluster: PAXNEB protein superfamily; n=5;
Pezizomycotina|Rep: PAXNEB protein superfamily -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 393
Score = 65.3 bits (152), Expect = 1e-09
Identities = 37/103 (35%), Positives = 57/103 (55%), Gaps = 2/103 (1%)
Frame = +2
Query: 164 PYVSSGIPSLDHIVGG--GIPAGSIFVVEEDVLGVYSKVLFKYFIAEGVACDHELFVTSL 337
P S+G SLD+++ G G+P G I ++EE+ ++ L +Y+ AEGV D + V +
Sbjct: 48 PTTSTGTRSLDNLLAGHGGLPIGKILLIEENGTTDFAGALLRYYAAEGVVQDQMVHVIGM 107
Query: 338 DEDPHKITSELPQPCALPPEDEKAPSTDAEKMKIAWRYEGLSQ 466
E + L P + DEK+ +E+MKIAWRYE L +
Sbjct: 108 PEQWGRSLPGLIGPADM--LDEKSDKKKSERMKIAWRYERLGE 148
>UniRef50_Q2UE77 Cluster: RNA polymerase II elongator complex; n=7;
Pezizomycotina|Rep: RNA polymerase II elongator complex
- Aspergillus oryzae
Length = 396
Score = 63.7 bits (148), Expect = 4e-09
Identities = 36/103 (34%), Positives = 55/103 (53%), Gaps = 2/103 (1%)
Frame = +2
Query: 164 PYVSSGIPSLDHIVGG--GIPAGSIFVVEEDVLGVYSKVLFKYFIAEGVACDHELFVTSL 337
P S+G SLD+++ G G+P G ++EE+ ++ L +Y+ AEGV D ++ V +
Sbjct: 48 PTTSTGSRSLDNLLAGHGGLPIGKTLLIEENGTTDFAGALLRYYAAEGVVQDQKVHVVGM 107
Query: 338 DEDPHKITSELPQPCALPPEDEKAPSTDAEKMKIAWRYEGLSQ 466
E + L P + DEK E+MKIAWRYE L +
Sbjct: 108 PEQWGRSLPGLIGPADV--ADEKPAKRKGERMKIAWRYERLGE 148
>UniRef50_A4RHK2 Cluster: Putative uncharacterized protein; n=3;
Sordariomycetes|Rep: Putative uncharacterized protein -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 407
Score = 55.6 bits (128), Expect = 1e-06
Identities = 54/179 (30%), Positives = 80/179 (44%), Gaps = 16/179 (8%)
Frame = +2
Query: 173 SSGIPSLDHIVGG--GIPAGSIFVVEEDVLGVYSKVLFKYFIAEGVACDHELFVTSLDED 346
S+G SLD ++ G G+P G+ +VEE +S VL +Y+ AEG+ H + + E
Sbjct: 52 STGTASLDTLLAGHAGLPLGTSLLVEEQGTTDFSGVLLRYYAAEGLVQGHHVHALAFPEA 111
Query: 347 -----PHKITSELPQPCALPPEDEKAPSTDAEKMKIAWRYEGL----SQV----ESSFGS 487
P + P + + +KMKIAWRYE L SQ E + G
Sbjct: 112 WKYELPALSYVSKSSSGSTPSRTFASADSAGDKMKIAWRYEALGNSRSQAQPARERAGGP 171
Query: 488 NTN-FGHNFDLSRYIDADTIEKSKIQYGTTTWQDSTLSWQTTMRRGKLKSALFHKLLRN 661
++ F H++DLS+ + I K Q+ + S LSW LF K L+N
Sbjct: 172 GSSVFCHSYDLSKRLSTSDI---KGQFHSIP-SVSPLSWSLEQLAEASPLRLFIKHLQN 226
>UniRef50_A2YFG1 Cluster: Putative uncharacterized protein; n=3;
Magnoliophyta|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 462
Score = 54.0 bits (124), Expect = 3e-06
Identities = 36/110 (32%), Positives = 54/110 (49%), Gaps = 10/110 (9%)
Frame = +2
Query: 155 NNLPYVSSGIPSLDHIVGGGIPAGSIFVVEEDVLGVYSKVLFKYFIAEGVACDHELFVTS 334
N +VSSGIP LD I+GGG GS+ ++ ED + +L + F+A+GV L
Sbjct: 37 NGAAFVSSGIPDLDRILGGGFLIGSVVMIMEDSDAPHHLLLLRNFMAQGVVHKQPLLFAG 96
Query: 335 LDEDPHKITSELPQPCALPPEDEK------APSTDA----EKMKIAWRYE 454
++P LP A ED + S+D E ++IAW+Y+
Sbjct: 97 PMKEPRLFLGTLP-AVASSKEDGRQRGMGAGTSSDGRTSDEALRIAWQYK 145
>UniRef50_Q0W4S2 Cluster: Putative uncharacterized protein; n=1;
uncultured methanogenic archaeon RC-I|Rep: Putative
uncharacterized protein - Uncultured methanogenic
archaeon RC-I
Length = 250
Score = 50.8 bits (116), Expect = 3e-05
Identities = 30/86 (34%), Positives = 48/86 (55%)
Frame = +2
Query: 143 TKVKNNLPYVSSGIPSLDHIVGGGIPAGSIFVVEEDVLGVYSKVLFKYFIAEGVACDHEL 322
T++KN S GI LD+ + GGIP GS+ ++EED G S +L F+AEG+ +
Sbjct: 2 TEIKNR---ASFGIADLDNALDGGIPRGSLILLEEDT-GARSGILQTKFVAEGLLNNEYC 57
Query: 323 FVTSLDEDPHKITSELPQPCALPPED 400
++ +++ P I + L L PE+
Sbjct: 58 YLFNMEHPPQAIINSL-STFGLEPEE 82
>UniRef50_Q6C0T6 Cluster: Similar to tr|Q02884 Saccharomyces
cerevisiae LPG7P; n=1; Yarrowia lipolytica|Rep: Similar
to tr|Q02884 Saccharomyces cerevisiae LPG7P - Yarrowia
lipolytica (Candida lipolytica)
Length = 379
Score = 50.4 bits (115), Expect = 4e-05
Identities = 44/145 (30%), Positives = 67/145 (46%), Gaps = 6/145 (4%)
Frame = +2
Query: 149 VKNNLPYVSSGIPSLDHIVG-GGIPAGSIFVVEEDVLGVYSKVLFKYFIAEGV-----AC 310
++++ P VSSG D +VG GIP G++ ++EE+ Y+ +L + F A+G
Sbjct: 74 LQSSTPTVSSGCFDFDKLVGHNGIPTGTLTLLEEESTTDYASILIRMFAAQGCIDRRNGG 133
Query: 311 DHELFVTSLDEDPHKITSELPQPCALPPEDEKAPSTDAEKMKIAWRYEGLSQVESSFGSN 490
V + D ++ E + KA S MKIAWRY S+VE
Sbjct: 134 SEVAVVGANDAWGRQLPGESDKKSRSRDPSSKAGS---GAMKIAWRYGYNSEVERKEQLA 190
Query: 491 TNFGHNFDLSRYIDADTIEKSKIQY 565
N FDL++ + I SKI+Y
Sbjct: 191 ENNTATFDLTKRLGGPEI--SKIRY 213
>UniRef50_UPI000023D6AB Cluster: hypothetical protein FG04274.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG04274.1 - Gibberella zeae PH-1
Length = 319
Score = 49.2 bits (112), Expect = 9e-05
Identities = 36/121 (29%), Positives = 58/121 (47%), Gaps = 10/121 (8%)
Frame = +2
Query: 215 IPAGSIFVVEEDVLGVYSKVLFKYFIAEGVACDHELFVTSLDEDPHKITSELPQPCALPP 394
+P G+ +VEE + VL +Y+ AEG+ H++ + + + L P
Sbjct: 1 MPMGTSLLVEETGTTDFGGVLLRYYAAEGLVQGHQVHLLGFGDAWRRELPGLGNPEG--S 58
Query: 395 EDEKAPSTDAEKMKIAWRYEGL---------SQVESSFGS-NTNFGHNFDLSRYIDADTI 544
K+ S+ +KMKIAWRYE L SQ +S G + F H FDL++ ++ I
Sbjct: 59 RKSKSSSSSDDKMKIAWRYETLGQRNIPARDSQGPTSPGQIQSTFCHTFDLTKRLENSAI 118
Query: 545 E 547
+
Sbjct: 119 K 119
>UniRef50_A4G1Y6 Cluster: Putative uncharacterized protein; n=1;
Herminiimonas arsenicoxydans|Rep: Putative
uncharacterized protein - Herminiimonas arsenicoxydans
Length = 480
Score = 43.6 bits (98), Expect = 0.004
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Frame = +2
Query: 170 VSSGIPSLDHIVGGGIPAG-SIFVVEEDVLGVYSKVLFKYFIAEGVACDHELFVTSLDED 346
+S G+P+LD ++GGG+PAG S+ +V G VL F+AEGV + + ++
Sbjct: 251 LSMGVPALDEMMGGGLPAGYSLLLVGPS--GSGKTVLATQFLAEGVRAGEPGVIAAFEKS 308
Query: 347 PHKITS 364
P+++ S
Sbjct: 309 PNQLLS 314
>UniRef50_Q5JES3 Cluster: ATPase, RecA superfamily; n=1;
Thermococcus kodakarensis KOD1|Rep: ATPase, RecA
superfamily - Pyrococcus kodakaraensis (Thermococcus
kodakaraensis)
Length = 237
Score = 42.3 bits (95), Expect = 0.010
Identities = 24/71 (33%), Positives = 35/71 (49%)
Frame = +2
Query: 158 NLPYVSSGIPSLDHIVGGGIPAGSIFVVEEDVLGVYSKVLFKYFIAEGVACDHELFVTSL 337
NL + SG+P LD ++GGG G ++VV G L F+AEG D + +L
Sbjct: 9 NLDRIPSGVPGLDELIGGGFLPGRVYVVTGPP-GSGKTTLGMQFLAEGAKNDEKGLFIAL 67
Query: 338 DEDPHKITSEL 370
E P I ++
Sbjct: 68 FETPDIIVRDM 78
>UniRef50_O29896 Cluster: Putative uncharacterized protein; n=1;
Archaeoglobus fulgidus|Rep: Putative uncharacterized
protein - Archaeoglobus fulgidus
Length = 226
Score = 40.7 bits (91), Expect = 0.031
Identities = 24/66 (36%), Positives = 31/66 (46%)
Frame = +2
Query: 170 VSSGIPSLDHIVGGGIPAGSIFVVEEDVLGVYSKVLFKYFIAEGVACDHELFVTSLDEDP 349
+ +GI LD I+GGGIP G I V G L +FI EG+ + S DED
Sbjct: 2 LKTGIEGLDAILGGGIPEGHIVAVVGQ-YGTGKTTLGLHFIYEGLKNGEACMIISFDEDE 60
Query: 350 HKITSE 367
I +
Sbjct: 61 ESIIGD 66
>UniRef50_Q55JE8 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 448
Score = 40.3 bits (90), Expect = 0.041
Identities = 29/123 (23%), Positives = 54/123 (43%), Gaps = 5/123 (4%)
Frame = +2
Query: 191 LDHIVGGGIPAGSIFVV-EEDVLGVYSKVLFKYFIAEGVACDHELFVTSLDEDPHKITSE 367
+D ++GGG+P SI +V D + ++L +Y+I++G+A + E+ +
Sbjct: 1 MDDLLGGGLPLHSILLVLAPDTQSAWGRLLERYWISQGLASGQAGVLVGEKEEGEAVVKG 60
Query: 368 LPQP----CALPPEDEKAPSTDAEKMKIAWRYEGLSQVESSFGSNTNFGHNFDLSRYIDA 535
E E + + KIAWRYE + + +++ N G N L I
Sbjct: 61 CMWTEGGVSGDGSESEGEGGVEGGERKIAWRYEKMGKFQTTVKGN---GSNLSLMTTIPP 117
Query: 536 DTI 544
+ +
Sbjct: 118 EAL 120
>UniRef50_O29732 Cluster: Putative uncharacterized protein; n=1;
Archaeoglobus fulgidus|Rep: Putative uncharacterized
protein - Archaeoglobus fulgidus
Length = 236
Score = 40.3 bits (90), Expect = 0.041
Identities = 23/63 (36%), Positives = 34/63 (53%)
Frame = +2
Query: 170 VSSGIPSLDHIVGGGIPAGSIFVVEEDVLGVYSKVLFKYFIAEGVACDHELFVTSLDEDP 349
V +GI LD +GGG+PAGS+ V E+ G + VL +F EG +F + D+
Sbjct: 4 VKTGILPLDTQLGGGMPAGSVVSVFEEP-GAGADVLSYHFTVEGATHGENVFYLATDDSS 62
Query: 350 HKI 358
+I
Sbjct: 63 EEI 65
>UniRef50_Q4PGP1 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 711
Score = 38.7 bits (86), Expect = 0.13
Identities = 39/116 (33%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Frame = +2
Query: 311 DHELFVTSLDEDPHKITSELPQPCALPPEDE-KAPSTDAEK---MKIAWRYEGLSQV--- 469
DH V D+ + TS + + EDE + S AE+ MKIAWRY + Q
Sbjct: 213 DHLDTVADDDDMQNSETSSVSGAASAEGEDEGEGRSNRAERERGMKIAWRYHSMKQFNTT 272
Query: 470 --ESSFGSN-----TNFGHNFDLSRYIDADTIEKSKIQYGTTTWQDSTLSWQTTMR 616
E S S+ T F H FDLSR ID ++ + Q ST S +T R
Sbjct: 273 VNEPSSSSSPSSQPTPFCHTFDLSRRIDGRIVQHAVEQNKLEMVDISTASKASTSR 328
>UniRef50_Q8D8I8 Cluster: RecA/RadA recombinase; n=4; Vibrio|Rep:
RecA/RadA recombinase - Vibrio vulnificus
Length = 227
Score = 37.1 bits (82), Expect = 0.39
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +2
Query: 131 HINGTKVKNNLPYVSSGIPSLDHIVGGGIPAGSIFVVEEDVLGV 262
H N T+ N Y +SGI LD ++GGG P + V E LG+
Sbjct: 16 HANSTRCANESCYQTSGIDELDKLLGGGFPQHGV-VEMESALGI 58
>UniRef50_A4SAZ1 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 429
Score = 36.7 bits (81), Expect = 0.51
Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 12/106 (11%)
Frame = +2
Query: 170 VSSGIPSLDHIVGGGIPAGSIFVVEEDVLGVYSKVLF-KYFIAEGVAC--DHELFVTSLD 340
VSSG D ++GGG GS+ D +++ LF F+AEG A +V +
Sbjct: 78 VSSGHGDADALLGGGHALGSLAACASDGASAHAEALFGACFVAEGAATARHRTCWVRAGR 137
Query: 341 EDPHKITSELPQPCALPPEDEKAPSTD---------AEKMKIAWRY 451
E + T LP+ + E E A +TD ++ ++IAW+Y
Sbjct: 138 EGRAEATRTLPRR-VVEREGESATTTDDRASEASEASDGLRIAWQY 182
>UniRef50_Q12XV7 Cluster: KaiC; n=1; Methanococcoides burtonii DSM
6242|Rep: KaiC - Methanococcoides burtonii (strain DSM
6242)
Length = 301
Score = 36.7 bits (81), Expect = 0.51
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = +2
Query: 170 VSSGIPSLDHIVGGGIPAGSIFVVEEDVLGVYSKVLFKYFIAEGVACDHELFVTSLDE 343
VS+G+ LD ++ GG+P GS +V G L F+ EGV D + S +E
Sbjct: 62 VSTGVAGLDDMLEGGVPKGSSVIVTGPP-GTGKTTLCMQFLMEGVKADEKCLFFSFEE 118
>UniRef50_A0GFK5 Cluster: RAD55; n=2; Burkholderia|Rep: RAD55 -
Burkholderia phytofirmans PsJN
Length = 531
Score = 36.3 bits (80), Expect = 0.67
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +2
Query: 107 RKFIDISTHINGTKVKNNLPYVSSGIPSLDHIVGGGIPAGSIFVVE 244
R D ST N ++ V +G+P LD I+GGG+ G ++++E
Sbjct: 33 RTLNDSSTMTNHESQTSSRSNVETGVPGLDEILGGGLVRGGVYLLE 78
>UniRef50_UPI00006CB1E6 Cluster: hypothetical protein
TTHERM_00301820; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00301820 - Tetrahymena
thermophila SB210
Length = 341
Score = 35.9 bits (79), Expect = 0.89
Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 6/112 (5%)
Frame = +2
Query: 146 KVKNNLPYVSSGIPSLDHIVGGGIPAGSIFVVEEDVLGVYSKVLFKYFIAEGVACDHELF 325
K K++L G D I I G+ ++EED +YF+ G + F
Sbjct: 13 KAKDDLNKAFFGHAEFDAIFSNSIKKGTTILIEEDYPTSMHVSFNRYFVGCGFHLEQNCF 72
Query: 326 VTSL------DEDPHKITSELPQPCALPPEDEKAPSTDAEKMKIAWRYEGLS 463
V + D P K TSE + +++ A S E+ KIAWRY ++
Sbjct: 73 VYDVFPKRWYDMIPVKSTSEEKRE-----QEKLAISKQKEENKIAWRYNHMT 119
>UniRef50_Q6LUG7 Cluster: DNA repair protein radA; n=7;
Proteobacteria|Rep: DNA repair protein radA -
Photobacterium profundum (Photobacterium sp. (strain
SS9))
Length = 459
Score = 35.9 bits (79), Expect = 0.89
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +2
Query: 143 TKVKN-NLPYVSSGIPSLDHIVGGGIPAGSIFVVEEDVLGVYSKVLFKYFIAEGVACDHE 319
++V+N +LP SSGI D ++GGGI GS+ ++ D G L I A
Sbjct: 65 SEVENKDLPRFSSGIGEFDRVLGGGIVPGSVLLLCGDP-GAGKSTLLLQSIGAVAAIKSA 123
Query: 320 LFVTSLDEDPHKIT 361
L+V+ +E H+I+
Sbjct: 124 LYVSG-EESIHQIS 136
>UniRef50_Q2IEE4 Cluster: Protein recA; n=1; Anaeromyxobacter
dehalogenans 2CP-C|Rep: Protein recA - Anaeromyxobacter
dehalogenans (strain 2CP-C)
Length = 494
Score = 35.5 bits (78), Expect = 1.2
Identities = 21/70 (30%), Positives = 33/70 (47%)
Frame = +2
Query: 161 LPYVSSGIPSLDHIVGGGIPAGSIFVVEEDVLGVYSKVLFKYFIAEGVACDHELFVTSLD 340
L VS+G+ LD ++GGGIPA SI VV + + + + L+ T+L
Sbjct: 10 LERVSTGVEGLDQVLGGGIPAKSITVVSGEPGSGKTVLALQMLFHAARQGKRSLYFTTLS 69
Query: 341 EDPHKITSEL 370
E K+ +
Sbjct: 70 EPSLKLVRHM 79
>UniRef50_Q6CLZ1 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome E of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=3; Saccharomycetales|Rep: Kluyveromyces lactis
strain NRRL Y-1140 chromosome E of strain NRRL Y- 1140
of Kluyveromyces lactis - Kluyveromyces lactis (Yeast)
(Candida sphaerica)
Length = 478
Score = 34.7 bits (76), Expect = 2.1
Identities = 33/121 (27%), Positives = 53/121 (43%), Gaps = 6/121 (4%)
Frame = +2
Query: 173 SSGIPSLDHIVG-GGIPAGSIFVVEEDVLGVYSKVLFKYFIAEGVACDH-ELFVTSLDED 346
S+G LD ++G G P G ++EE+ ++ +L K + ++G+ + E D +
Sbjct: 108 STGCTDLDKLMGHSGFPLGCSLLIEEESTTDFNSILTKVYASQGIVHNRIEGSHGFKDGN 167
Query: 347 PHKITSELPQPCALP-PEDEKAPSTDAEKMKIAWRYEGL---SQVESSFGSNTNFGHNFD 514
H I L P K D +K KIA + + +ES SNT+ N D
Sbjct: 168 THLIVLSLNHHLTKELPGVYKGSRKDIKKSKIAQEQSKVTVSNLLESQSKSNTSAQRNKD 227
Query: 515 L 517
L
Sbjct: 228 L 228
>UniRef50_Q02884 Cluster: Elongator complex protein 4; n=2;
Saccharomyces cerevisiae|Rep: Elongator complex protein
4 - Saccharomyces cerevisiae (Baker's yeast)
Length = 456
Score = 34.7 bits (76), Expect = 2.1
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +2
Query: 164 PYVSSGIPSLDHIVGG-GIPAGSIFVVEEDVLGVYSKVLFKYFIAEGV 304
P S+G LD I+G G+P G+ +VEE + +L K F A+G+
Sbjct: 84 PTTSTGSADLDSILGHMGLPLGNSVLVEEQSTTEFHSILGKLFAAQGI 131
>UniRef50_A0E5J0 Cluster: Chromosome undetermined scaffold_8, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_8,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 305
Score = 34.3 bits (75), Expect = 2.7
Identities = 33/137 (24%), Positives = 57/137 (41%)
Frame = +2
Query: 137 NGTKVKNNLPYVSSGIPSLDHIVGGGIPAGSIFVVEEDVLGVYSKVLFKYFIAEGVACDH 316
N K N Y G P LD ++G + G I +E+D K L +Y I +H
Sbjct: 9 NSKKEDPNKAYF--GHPELDALLGNTLLKGQIIFIEQDSPTTIYKQLLRYCIGNSFHKNH 66
Query: 317 ELFVTSLDEDPHKITSELPQPCALPPEDEKAPSTDAEKMKIAWRYEGLSQVESSFGSNTN 496
+ D+ + + +P+ E++ + KIAWRY + Q + +++
Sbjct: 67 VSIL--FDQFCEQWSKIVPKKQV---ENQSQQEEKEMQNKIAWRYNQMQQQFTIKNIDSS 121
Query: 497 FGHNFDLSRYIDADTIE 547
+ DLS+ T+E
Sbjct: 122 IFY-LDLSKSETEQTVE 137
>UniRef50_Q2UF97 Cluster: Predicted protein; n=1; Aspergillus
oryzae|Rep: Predicted protein - Aspergillus oryzae
Length = 465
Score = 34.3 bits (75), Expect = 2.7
Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
Frame = +2
Query: 299 GVACDH-ELFVTSLDEDPHKITSELPQPCALPPEDEKAPSTDAEKMKIAWRYEGLSQVES 475
G+ C H T + E P E+P P PED AP + W ++ ++
Sbjct: 23 GLECPHCHSEFTEIIEIPPDTEEEVPDPPTSVPEDRSAPPRNPWADHNPWDHDNMNTDTP 82
Query: 476 SFGSNTNFGHN 508
+GS F H+
Sbjct: 83 DWGSGNGFRHH 93
>UniRef50_UPI0000E0F49C Cluster: hypothetical
5-formyltetrahydrofolatecyclo-ligase-family protein;
n=1; alpha proteobacterium HTCC2255|Rep: hypothetical
5-formyltetrahydrofolatecyclo-ligase-family protein -
alpha proteobacterium HTCC2255
Length = 211
Score = 33.9 bits (74), Expect = 3.6
Identities = 20/57 (35%), Positives = 26/57 (45%)
Frame = -1
Query: 306 ATPSAMKYLNNTLLYTPRTSSSTTKMLPAGIPPPTIWSKDGIPEDTYGRLFFTFVPF 136
A P + TLL+ TS S GIP P + ++D IP T R+F V F
Sbjct: 78 ALPVLHPFHPQTLLFVRYTSQSNMTKNKFGIPEPQLTTQDIIPIHTINRIFVPLVGF 134
>UniRef50_Q17CU0 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 607
Score = 33.9 bits (74), Expect = 3.6
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = -1
Query: 354 LCGSSSKDVTNNSWSQATPSAMKYLNNTLLYTPRTSSSTTKMLP 223
LC SSS ++++ S T S + +L+ T ++P SSST + P
Sbjct: 366 LCSSSSSGQSHSTHSNPTTSVISHLSPTSAHSPINSSSTASITP 409
>UniRef50_Q64C90 Cluster: Predicted ATP-dependent serine protease;
n=2; environmental samples|Rep: Predicted ATP-dependent
serine protease - uncultured archaeon GZfos1D1
Length = 989
Score = 33.9 bits (74), Expect = 3.6
Identities = 19/74 (25%), Positives = 35/74 (47%)
Frame = +2
Query: 149 VKNNLPYVSSGIPSLDHIVGGGIPAGSIFVVEEDVLGVYSKVLFKYFIAEGVACDHELFV 328
V N L V +G+ +D ++GGG+ GS ++ + K+L FI +G+ + +
Sbjct: 763 VGNLLDIVPTGLEEMDKVMGGGLAKGSSTLLIAEETRTKHKILLS-FIKQGLRASNSVIY 821
Query: 329 TSLDEDPHKITSEL 370
+ +I EL
Sbjct: 822 ATAKRPARQIQGEL 835
>UniRef50_A2SRJ6 Cluster: RecA-superfamily ATPase implicated in
signal transduction-like protein; n=1;
Methanocorpusculum labreanum Z|Rep: RecA-superfamily
ATPase implicated in signal transduction-like protein -
Methanocorpusculum labreanum (strain ATCC 43576 / DSM
4855 / Z)
Length = 238
Score = 33.9 bits (74), Expect = 3.6
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +2
Query: 170 VSSGIPSLDHIVGGGIPAGSIFVV 241
+ SGIP LD ++GGG GS+FV+
Sbjct: 11 IPSGIPGLDDMIGGGFIKGSVFVL 34
>UniRef50_Q0RBD5 Cluster: Putative uncharacterized protein; n=1;
Frankia alni ACN14a|Rep: Putative uncharacterized
protein - Frankia alni (strain ACN14a)
Length = 3144
Score = 33.5 bits (73), Expect = 4.8
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = -1
Query: 357 ILCGSSSKDVTNNSWSQATPSAMKYLNNTLLYTPRTSSSTTKMLPAGIPPPTIWSKD-GI 181
++ +++ + +S ATP + K + + T RT S T +P+G+ P + W+ GI
Sbjct: 291 VVVNPTAQTIVTDSGVSATPGSYKVIFTPVGGTSRTLSGTLPTVPSGLYPSSSWTTPAGI 350
Query: 180 P 178
P
Sbjct: 351 P 351
>UniRef50_Q08XB9 Cluster: KaiC domain protein; n=1; Stigmatella
aurantiaca DW4/3-1|Rep: KaiC domain protein -
Stigmatella aurantiaca DW4/3-1
Length = 491
Score = 33.5 bits (73), Expect = 4.8
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +2
Query: 176 SGIPSLDHIVGGGIPAGSIFVVEEDVLGVYSKVLFKYFIAEGVACDHELFVTSLDEDPH 352
SGIPS D ++GGGIP ++ D G +L A D + + ++ +PH
Sbjct: 13 SGIPSFDALLGGGIPRRQSLIITGDP-GCGKTILCGQVAFRAAARDVPVVLATVTSEPH 70
>UniRef50_Q5A2U1 Cluster: Putative uncharacterized protein RAD57;
n=1; Candida albicans|Rep: Putative uncharacterized
protein RAD57 - Candida albicans (Yeast)
Length = 511
Score = 33.5 bits (73), Expect = 4.8
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = +2
Query: 167 YVSSGIPSLDHIVGGGIPAGSI 232
++S+G+PS+D +GGGIP G +
Sbjct: 84 FISTGLPSIDRELGGGIPIGEV 105
>UniRef50_A2QYI6 Cluster: Similarity: Most weak blast hits are
caused by repetetive sequence elements; n=6;
Pezizomycotina|Rep: Similarity: Most weak blast hits are
caused by repetetive sequence elements - Aspergillus
niger
Length = 667
Score = 33.5 bits (73), Expect = 4.8
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = +2
Query: 365 ELPQPCALPPEDEKAPSTDAEKMKIAWRYEGLSQVES-SFGSNTN-FGHNFDLSRYIDAD 538
EL ALPP K+ + D +K W+ E FG T H + Y+D
Sbjct: 255 ELELGMALPPRIRKSKTGDWPYIKGGWKLNKAQYAEPVYFGDGTGALDHKLGQAEYLDKM 314
Query: 539 TIEKSKIQ 562
IEK+K++
Sbjct: 315 VIEKAKVR 322
>UniRef50_Q8TQM7 Cluster: Putative uncharacterized protein; n=1;
Methanosarcina acetivorans|Rep: Putative uncharacterized
protein - Methanosarcina acetivorans
Length = 584
Score = 33.5 bits (73), Expect = 4.8
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = -1
Query: 285 YLNNTLLYTPRTSSSTTKMLPAGIPPPTIWSKDGIPEDTYGRLFFTF 145
YLN + T S T + P I PPT +DG+ ED G F
Sbjct: 496 YLNTNVCIKAFTDSGTLSVFPGYINPPTDLDQDGLYEDVNGNGILDF 542
>UniRef50_Q9RVC4 Cluster: DNA repair protein radA; n=4;
Deinococci|Rep: DNA repair protein radA - Deinococcus
radiodurans
Length = 503
Score = 33.1 bits (72), Expect = 6.3
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +2
Query: 164 PYVSSGIPSLDHIVGGGIPAGSIFVV 241
P SGIP LD ++GGG+ AG + ++
Sbjct: 130 PRTPSGIPELDRVLGGGLVAGGVTLI 155
>UniRef50_A1WPH7 Cluster: Tfp pilus assembly protein tip-associated
adhesin PilY1-like protein precursor; n=1;
Verminephrobacter eiseniae EF01-2|Rep: Tfp pilus
assembly protein tip-associated adhesin PilY1-like
protein precursor - Verminephrobacter eiseniae (strain
EF01-2)
Length = 1658
Score = 33.1 bits (72), Expect = 6.3
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +2
Query: 119 DISTHINGTKVKNNLPYVSSGIPSLDHIVGGGIPAGSIFVVEEDV 253
D++T N K+K +S G P +D +V G +P +++ E V
Sbjct: 640 DLATVENALKIKTMAVSLSGGAPRIDVLVPGSVPPKYVYITPESV 684
>UniRef50_A2BKD6 Cluster: Universally conserved protein; n=1;
Hyperthermus butylicus DSM 5456|Rep: Universally
conserved protein - Hyperthermus butylicus (strain DSM
5456 / JCM 9403)
Length = 250
Score = 33.1 bits (72), Expect = 6.3
Identities = 18/69 (26%), Positives = 32/69 (46%)
Frame = +2
Query: 164 PYVSSGIPSLDHIVGGGIPAGSIFVVEEDVLGVYSKVLFKYFIAEGVACDHELFVTSLDE 343
P V G+P LD ++ GIP S+ ++ D G ++ + + ++ LD+
Sbjct: 4 PNVKFGVPILDKLLPRGIPRRSLVIMVGD-SGTGKSLITQLMAGSFLQRGEKVIYVCLDD 62
Query: 344 DPHKITSEL 370
DP I S +
Sbjct: 63 DPESIVSSM 71
>UniRef50_P38450 Cluster: Uncharacterized mitochondrial protein
ymf1; n=2; Embryophyta|Rep: Uncharacterized
mitochondrial protein ymf1 - Marchantia polymorpha
(Liverwort)
Length = 168
Score = 33.1 bits (72), Expect = 6.3
Identities = 23/79 (29%), Positives = 34/79 (43%)
Frame = -1
Query: 339 SKDVTNNSWSQATPSAMKYLNNTLLYTPRTSSSTTKMLPAGIPPPTIWSKDGIPEDTYGR 160
+K+ NN+WSQ PSA N LLY S+ M I T + + +G
Sbjct: 93 AKEAPNNTWSQLLPSASYSQNLVLLYGQDRSTVFNHM---DIKKATTLETTSVFQQLFGF 149
Query: 159 LFFTFVPFICVLISINFRK 103
+F F+ ++ N RK
Sbjct: 150 MFLPGACFLFLVEQANGRK 168
>UniRef50_UPI0000585167 Cluster: PREDICTED: similar to
endonuclease/reverse transcriptase, partial; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease/reverse transcriptase, partial -
Strongylocentrotus purpuratus
Length = 737
Score = 32.7 bits (71), Expect = 8.3
Identities = 15/29 (51%), Positives = 20/29 (68%), Gaps = 4/29 (13%)
Frame = +2
Query: 392 PEDEK----APSTDAEKMKIAWRYEGLSQ 466
P+D+K + TD +KMKIAWRY+ L Q
Sbjct: 31 PDDDKDRKTSQETDEDKMKIAWRYQHLPQ 59
>UniRef50_Q5XDA1 Cluster: Putative uncharacterized protein; n=12;
Streptococcus pyogenes|Rep: Putative uncharacterized
protein - Streptococcus pyogenes serotype M6
Length = 252
Score = 32.7 bits (71), Expect = 8.3
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +2
Query: 158 NLPYVSSGIPSLDHIVGGGIPAGSIFVVEEDVLGVYSKVLFKYFIAEG-VACDHELFVTS 334
N+PY+ G S++ ++ I F+ + DVL + SKV+ IAEG V +E+ V+
Sbjct: 18 NIPYLKEG-DSIEKLIEESIKTSGFFIEDNDVLCIASKVV---SIAEGQVMSLNEIQVSD 73
Query: 335 LDEDPHK 355
+ ++ H+
Sbjct: 74 VAKEIHR 80
>UniRef50_Q8ZXQ7 Cluster: Putative uncharacterized protein PAE1156;
n=5; Thermoproteaceae|Rep: Putative uncharacterized
protein PAE1156 - Pyrobaculum aerophilum
Length = 268
Score = 32.7 bits (71), Expect = 8.3
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +2
Query: 170 VSSGIPSLDHIVGGGIPAGSIFVVEEDVLGVYSKVLFKYFIAEGV-ACDHELFVTSLDE 343
+S+G+ LD + GGIP GS VV + GV +L +F G+ A D ++VT+ E
Sbjct: 4 ISTGVDVLDKALEGGIPQGSWVVVTGEP-GVGKSILCIHFAYAGLRAGDPVVYVTTEQE 61
>UniRef50_Q58527 Cluster: Uncharacterized protein MJ1127; n=6;
Methanococcales|Rep: Uncharacterized protein MJ1127 -
Methanococcus jannaschii
Length = 280
Score = 32.7 bits (71), Expect = 8.3
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Frame = +2
Query: 146 KVKNNLPYVSSGIPSLDHIVGGGIPAGSIFVVEEDVLGVYSKVLFKYF--IAEGVACDHE 319
++ + L Y + D IVG G + V EDV +++L KY +A+ + C +
Sbjct: 99 RIVDALNYAKKLVEEYDFIVGIGEVGRPHYPVSEDVWKASNEIL-KYCMELAKDIGCAIQ 157
Query: 320 LFVTSLDEDPHKITSELPQPCALPPE 397
+ S E+ K SE+ + L PE
Sbjct: 158 IHAESSTEEQFKEFSEMAKEVGLNPE 183
>UniRef50_A6F242 Cluster: Probable beta-lactamase; n=1; Marinobacter
algicola DG893|Rep: Probable beta-lactamase -
Marinobacter algicola DG893
Length = 353
Score = 25.8 bits (54), Expect(2) = 9.3
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 134 INGTKVKNNLPYVSSGIPSLDHIVGGGIPAGSIF 235
+N L Y+S I + DH + GG+PAG+ F
Sbjct: 259 LNDAHTDQLLGYLSE-ITTGDHRIAGGLPAGTHF 291
Score = 25.4 bits (53), Expect(2) = 9.3
Identities = 15/61 (24%), Positives = 28/61 (45%)
Frame = +2
Query: 350 HKITSELPQPCALPPEDEKAPSTDAEKMKIAWRYEGLSQVESSFGSNTNFGHNFDLSRYI 529
HK +++ + C + + +AP A Y LS+ E ++ + N H L+R +
Sbjct: 293 HKTGTQVARSCDIGLLNPQAPDEAVIVAVCARDYAALSEAERAYQAIGNALHESGLTRTV 352
Query: 530 D 532
D
Sbjct: 353 D 353
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 681,235,048
Number of Sequences: 1657284
Number of extensions: 14565628
Number of successful extensions: 44806
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 42674
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44762
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51652897375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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