Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0370
         (585 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     22   4.4  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   5.8  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   7.7  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   7.7  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   7.7  

>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -1

Query: 111 PGWSSRKAATSYTTLSMMI 55
           PG  S++AA +Y+TL+  +
Sbjct: 257 PGGDSQQAALNYSTLASAV 275


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = -1

Query: 153 EASEPALSTRTSVPPGWSSRKAATSYTTLSMMIRFCLLLS 34
           E  +PAL    +VP G  + KA      +S  + F  L++
Sbjct: 239 EIKKPALLLSAAVPVGPDNIKAGYDVPAVSSYLDFINLMA 278


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +2

Query: 89  AFLEDHPGGTEVLVDNAGSDASECFHEV 172
           AFL  +P GT  ++D  G      F EV
Sbjct: 59  AFLGVYPNGTLQMIDEWGDIEKGNFAEV 86


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/33 (24%), Positives = 17/33 (51%)
 Frame = -1

Query: 261 CLHFTSNFSSSTISPTLNVLRHSMAISLWPTSW 163
           C++ T+ + S  I  T N++   + +    T+W
Sbjct: 336 CVYTTATYDSFMIYKTTNIIILGLNVVYVVTAW 368


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/33 (24%), Positives = 17/33 (51%)
 Frame = -1

Query: 261 CLHFTSNFSSSTISPTLNVLRHSMAISLWPTSW 163
           C++ T+ + S  I  T N++   + +    T+W
Sbjct: 61  CVYTTATYDSFMIYKTTNIIILGLNVVYVVTAW 93


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,212
Number of Sequences: 336
Number of extensions: 2080
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14621740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)