Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0365
(611 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23520| Best HMM Match : TIL (HMM E-Value=0.0062) 41 7e-04
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.015
SB_43576| Best HMM Match : EGF_CA (HMM E-Value=2.7e-38) 35 0.060
SB_23038| Best HMM Match : EGF_2 (HMM E-Value=2.8e-11) 35 0.060
SB_38887| Best HMM Match : EGF_CA (HMM E-Value=6.2e-31) 35 0.060
SB_25762| Best HMM Match : VWD (HMM E-Value=2.2e-16) 35 0.060
SB_17530| Best HMM Match : EGF_CA (HMM E-Value=0) 35 0.060
SB_13504| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_39475| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.56
SB_21594| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.74
SB_48268| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.97
SB_30644| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.97
SB_29838| Best HMM Match : EGF (HMM E-Value=1.2e-15) 31 0.97
SB_26085| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.97
SB_19803| Best HMM Match : Baculo_11_kDa (HMM E-Value=9.4) 31 0.97
SB_11641| Best HMM Match : 7tm_1 (HMM E-Value=2.1e-33) 31 0.97
SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0) 30 1.3
SB_41418| Best HMM Match : EGF_CA (HMM E-Value=0) 30 1.3
SB_42336| Best HMM Match : Sushi (HMM E-Value=1.5e-08) 29 2.2
SB_21309| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_53569| Best HMM Match : EGF_CA (HMM E-Value=0) 29 3.9
SB_38935| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_41711| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 28 5.2
SB_33821| Best HMM Match : zf-MIZ (HMM E-Value=1.3e-29) 28 5.2
SB_23832| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2
SB_15410| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2
SB_13199| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2
SB_6742| Best HMM Match : EGF_CA (HMM E-Value=5.40004e-41) 28 5.2
SB_41134| Best HMM Match : EGF_CA (HMM E-Value=0) 28 6.9
SB_40597| Best HMM Match : Dynein_heavy (HMM E-Value=0.55) 28 6.9
SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38) 28 6.9
SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45) 28 6.9
SB_18560| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_58621| Best HMM Match : RVT_1 (HMM E-Value=1.5e-25) 27 9.1
SB_30130| Best HMM Match : Cadherin (HMM E-Value=0.0035) 27 9.1
SB_27746| Best HMM Match : MAM (HMM E-Value=1.4013e-45) 27 9.1
SB_27178| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
>SB_23520| Best HMM Match : TIL (HMM E-Value=0.0062)
Length = 238
Score = 41.1 bits (92), Expect = 7e-04
Identities = 23/55 (41%), Positives = 30/55 (54%)
Frame = +1
Query: 67 CPENSHLTMNPCAPTCEDPDLTHTSCVAALLPTCHCDDGFLFDKSGKCVPVDECP 231
CP ++ L M TC D+ TS A L C CDDG +F +G C+ V+ECP
Sbjct: 3 CPGDTKLRMCKLQATCNKRDICDTS--RAKLRCC-CDDGLVF-YNGLCIRVEECP 53
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 36.7 bits (81), Expect = 0.015
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 163 TCHCDDGFLFDKSGKCVPVDECPDQESDC 249
TC C +G+ D GKC V+EC + DC
Sbjct: 483 TCQCAEGYERDSQGKCADVNECKTGKHDC 511
Score = 33.1 bits (72), Expect = 0.18
Identities = 19/51 (37%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Frame = +1
Query: 100 CAPTCEDPDLTHTSCVAALLPT-CHCDDGFLFDKSGKCVPVDECPDQESDC 249
C P C D + C + C C DGF D C VDEC D DC
Sbjct: 383 CVPACGD----NAVCAGPIDDKRCECKDGFQGDGQ-TCTDVDECTDGLHDC 428
Score = 31.5 bits (68), Expect = 0.56
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +1
Query: 118 DPDLTHTSCVAALLPTCHCDDGFLFDKSGK-CVPVDECPDQESDC 249
DP+ T+ + L C C GF D GK C +DEC D DC
Sbjct: 634 DPNALCTNTPGSYL--CRCKSGFQGD--GKTCADIDECSDGSHDC 674
Score = 30.7 bits (66), Expect = 0.97
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +1
Query: 166 CHCDDGFLFDKSGK-CVPVDECPDQESDC 249
C C GF+ D GK CV DEC +++ DC
Sbjct: 197 CRCRKGFVGD--GKTCVDKDECVEEDHDC 223
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = +1
Query: 61 KDCPENSHLTMNPCAPTCEDPDLTHTSCVAALLPTCHCDDGFLFDKSGKCVPVDECPDQE 240
KD E + + N C DP+ T+ V + + C C G+ D C +DEC ++
Sbjct: 252 KDVDECASVLHNKC-----DPNALCTNSVGSYV--CRCKKGYTGDGI-TCKDIDECTNKT 303
Query: 241 SDC 249
DC
Sbjct: 304 DDC 306
>SB_43576| Best HMM Match : EGF_CA (HMM E-Value=2.7e-38)
Length = 641
Score = 34.7 bits (76), Expect = 0.060
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 112 CEDPD-LTHTSCVAALLPTCHCDDGFLFD-KSGKCVPVDECPDQESDC 249
C D D + T+ V + TC CD G +D K KC+ VDEC +C
Sbjct: 320 CPDSDRMLCTNTVGSY--TCSCDTGLAWDEKKRKCIDVDECMTGTHNC 365
>SB_23038| Best HMM Match : EGF_2 (HMM E-Value=2.8e-11)
Length = 1477
Score = 34.7 bits (76), Expect = 0.060
Identities = 22/60 (36%), Positives = 28/60 (46%)
Frame = +1
Query: 76 NSHLTMNPCAPTCEDPDLTHTSCVAALLPTCHCDDGFLFDKSGKCVPVDECPDQESDCIN 255
N+ +T+ C TCE+ H CVA TC CD F SG D C E++C N
Sbjct: 1336 NATITITTCTYTCENNCSNHGQCVAR--DTCVCDQKF----SGNDCSADTC---ENNCSN 1386
>SB_38887| Best HMM Match : EGF_CA (HMM E-Value=6.2e-31)
Length = 131
Score = 34.7 bits (76), Expect = 0.060
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 112 CEDPD-LTHTSCVAALLPTCHCDDGFLFD-KSGKCVPVDECPDQESDC 249
C D D + T+ V + TC CD G +D K KC+ VDEC +C
Sbjct: 11 CPDSDRMLCTNTVGSY--TCSCDTGLAWDEKKRKCIDVDECMTGTHNC 56
>SB_25762| Best HMM Match : VWD (HMM E-Value=2.2e-16)
Length = 705
Score = 34.7 bits (76), Expect = 0.060
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 6/61 (9%)
Frame = +1
Query: 67 CPENS--HLTMNPCAPTCEDPDLTHTSCVAALLPTCHCDDGFL--FDKSGK--CVPVDEC 228
CPEN+ + C TC DP + +C + C C + F+ + GK C+ EC
Sbjct: 180 CPENAVFKYCTSACPETCHDPPGRNKTCSMRCVEGCECKEEFVQRVNAVGKVQCIKRKEC 239
Query: 229 P 231
P
Sbjct: 240 P 240
>SB_17530| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 165
Score = 34.7 bits (76), Expect = 0.060
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 163 TCHCDDGFLFDKSGKCVPVDECPDQESDC 249
TC C +G+ + GKC V+EC + DC
Sbjct: 26 TCQCAEGYERNSQGKCADVNECKTGKHDC 54
>SB_13504| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4924
Score = 33.1 bits (72), Expect = 0.18
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 5/36 (13%)
Frame = +1
Query: 163 TCHCDDGFLFDKSG-KCVPVDECPDQ----ESDCIN 255
TC C G+ FD S +C+ ++EC E DCIN
Sbjct: 2128 TCDCPRGYTFDNSSRRCIDINECERNNGWCEHDCIN 2163
>SB_39475| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 31.5 bits (68), Expect = 0.56
Identities = 19/59 (32%), Positives = 32/59 (54%)
Frame = -1
Query: 347 GPPDGKWLPSPMDFSNARSRAKPLPIISRNQLIQSLSWSGHSSTGTHFPDLSNKKPSSQ 171
GPP + P P S R++ + L +I R+ +Q S + H+S+ T PD + P+S+
Sbjct: 253 GPPRQEHPPPPPPGSRGRAKTQ-LQLIPRS--LQKTSSTPHTSSSTSSPDPQGRAPASK 308
>SB_21594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1075
Score = 31.1 bits (67), Expect = 0.74
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +1
Query: 109 TCEDPDLTHTSCVAALLPTCHCDDGFLFDKSGKCVPVDECPDQESDCIN 255
TC + C L+P CHC +GF DK ++EC Q + C N
Sbjct: 475 TCSNGGTCEVDC-KTLVPRCHCPEGFSGDKCED--DINEC--QSNPCKN 518
>SB_48268| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4527
Score = 30.7 bits (66), Expect = 0.97
Identities = 21/62 (33%), Positives = 28/62 (45%)
Frame = +1
Query: 64 DCPENSHLTMNPCAPTCEDPDLTHTSCVAALLPTCHCDDGFLFDKSGKCVPVDECPDQES 243
+C HL CAP+ T T+ V A TC C+ G+ D C +DEC D +
Sbjct: 554 ECSSGGHL----CAPSGS----TCTNTVGAF--TCACNAGYTGD-GVTCTDIDECSDGTN 602
Query: 244 DC 249
C
Sbjct: 603 TC 604
>SB_30644| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1887
Score = 30.7 bits (66), Expect = 0.97
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +1
Query: 4 PHAPARIPDGSRSQPGSV-EKDCPENSHLTMNPCAPTCEDPDL 129
P P SRS+P + + DCP N + C C +PDL
Sbjct: 1559 PSLPREPRCSSRSRPKCLLDSDCPGNQKCCSDGCTMICTNPDL 1601
>SB_29838| Best HMM Match : EGF (HMM E-Value=1.2e-15)
Length = 373
Score = 30.7 bits (66), Expect = 0.97
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = +1
Query: 109 TCEDPDLTHTSCVAALLPTCHCDDGFLFDKSGKCVPVDEC 228
TC + C L P CHC GF D KC +DEC
Sbjct: 235 TCSNGGTCEVDC-KTLRPRCHCLAGFSGD---KCENIDEC 270
>SB_26085| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 484
Score = 30.7 bits (66), Expect = 0.97
Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Frame = +1
Query: 163 TCHCDDGFLFDK-SGKCVPVDEC 228
TC C+ G+L D C+ VDEC
Sbjct: 308 TCECESGYLMDDLKAHCIDVDEC 330
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 5/35 (14%)
Frame = +1
Query: 139 SCVAALLP-TCHCDDGFLFDK----SGKCVPVDEC 228
+C+ AL C C+ GF D+ SG CV +DEC
Sbjct: 254 TCLNALGSYACQCEPGFRLDRTLGLSGVCVDMDEC 288
Score = 27.9 bits (59), Expect = 6.9
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = +1
Query: 166 CHCDDGFLFDKSGKCVPVDECPDQESDC 249
C C GF+ +++ C+ +EC ++E+DC
Sbjct: 425 CLCKPGFINNENA-CLDRNECLEEENDC 451
>SB_19803| Best HMM Match : Baculo_11_kDa (HMM E-Value=9.4)
Length = 177
Score = 30.7 bits (66), Expect = 0.97
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = -1
Query: 596 STWLILQIKISITKAFKPKSHGAFNSSPLQTNYHLKKFHSKI 471
+T +IL I IS T A + +F+S+PL +YHL H+ I
Sbjct: 124 TTIIILTITISTTTAVSSPTT-SFSSAPLSNHYHLHHHHTII 164
>SB_11641| Best HMM Match : 7tm_1 (HMM E-Value=2.1e-33)
Length = 390
Score = 30.7 bits (66), Expect = 0.97
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -3
Query: 240 LLVWTFINGYAFSRFVEQEAIITVACWEQCRYAAGV 133
L+VW + AF FVE E T+A + QC A V
Sbjct: 144 LVVWIYAASCAFLSFVEWEGESTIAAYPQCGIRARV 179
>SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0)
Length = 3891
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/60 (30%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Frame = +1
Query: 73 ENSHLTMNPCAPTCEDPDLTHTSCVAALLPTCHCDDGFLFDKSGKCVPVD-ECPDQESDC 249
E T+NPC + THT V P C C G+ + +CV + C E C
Sbjct: 2119 EAQDCTVNPCVL---NGGCTHTCTVLDGKPVCSCPQGYRLENPYRCVLSNASCASSEFAC 2175
Score = 29.9 bits (64), Expect = 1.7
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 10/89 (11%)
Frame = +1
Query: 19 RIPDGSRSQPGSVEKDCPEN-SHLTM-NPCAPTCEDP------DLTHTSCVA--ALLPTC 168
++ + SR Q S D SHL + NP C P L + +C ++PT
Sbjct: 764 KVFNSSRQQGSSACSDGTSGCSHLCLLNPTGHVCMCPYGMALDQLDNKTCEKNFTVIPTP 823
Query: 169 HCDDGFLFDKSGKCVPVDECPDQESDCIN 255
C G K+G C+ + D E+DC++
Sbjct: 824 PCSAGKFTCKNGHCISLRWKCDGENDCVD 852
>SB_41418| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 3312
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Frame = +1
Query: 163 TCHCDDGFLFDKSGK-CVPVDEC 228
TC C +GFL + GK C +DEC
Sbjct: 561 TCACREGFLLRQDGKTCEDIDEC 583
>SB_42336| Best HMM Match : Sushi (HMM E-Value=1.5e-08)
Length = 303
Score = 29.5 bits (63), Expect = 2.2
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +1
Query: 166 CHCDDGFLFDKSGKCVPVDECPDQESDC 249
C+C GF CV +DEC ++ C
Sbjct: 30 CYCKRGFKLSGQYHCVDIDECAEKLDKC 57
>SB_21309| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1286
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Frame = +1
Query: 73 ENSHLTMNPCAPTCEDPDLTHTSCVAALLPTCHCDDGF--LFDKSGKCVPVDEC 228
E+ NPC C+ P +C+ + TC C + K +CVP EC
Sbjct: 425 ESRMCNQNPCPTICKVPCENGGTCIDPVSNTCQCPPNWRGATCKQAECVP--EC 476
>SB_53569| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 921
Score = 28.7 bits (61), Expect = 3.9
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +1
Query: 163 TCHCDDGFLFDKSGKCVPVDECPD 234
+C C G+ +CV VDEC D
Sbjct: 585 SCSCHQGYRLKGKHQCVDVDECSD 608
>SB_38935| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 281
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +1
Query: 166 CHCDDGFLFDKSGK-CVPVDECPDQESDC 249
C+C +G+ D GK C +DEC ++ DC
Sbjct: 213 CNCMEGYTGD--GKTCQDIDECTNETDDC 239
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 28.7 bits (61), Expect = 3.9
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = +1
Query: 4 PHAPARIPDGSRSQPGSVEKDCPENSHLTMNPCAPTCEDPDLTHTSCVAALLPTCHCD 177
P P R GS++ V K CP S +++ C P C T T ++A TC D
Sbjct: 1622 PECPVRCCSGSQTLDLGVSKTCP--SWCSVSSCKPDCPARCCT-TEPLSACPATCSPD 1676
>SB_41711| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1662
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Frame = +1
Query: 130 THTSCVAALLPT---CHCDDGFLFDKSGKCVPVDECPDQESDC 249
T+ CV + T C C GF ++ C +DEC ++ + C
Sbjct: 1458 TNAHCVTSFDLTHAACECKVGFQGNQQTGCQDIDECTERRNPC 1500
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +1
Query: 157 LPTCHCDDGFLFDKSGKCVPVDECPDQESDC 249
+P+C CD GF K GKC+ P C
Sbjct: 73 VPSCTCDKGFAL-KDGKCLGESHMPCVTQPC 102
Score = 27.5 bits (58), Expect = 9.1
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +1
Query: 166 CHCDDGFLFDKSGKCVPVDECPDQESDC 249
C+C G+ G+C +DEC S C
Sbjct: 234 CYCFSGYELIAGGQCRDIDECRVNASVC 261
>SB_33821| Best HMM Match : zf-MIZ (HMM E-Value=1.3e-29)
Length = 1202
Score = 28.3 bits (60), Expect = 5.2
Identities = 17/57 (29%), Positives = 25/57 (43%)
Frame = +1
Query: 4 PHAPARIPDGSRSQPGSVEKDCPENSHLTMNPCAPTCEDPDLTHTSCVAALLPTCHC 174
P P R PD + G ++ P + N + P +HTS V+ LPT +C
Sbjct: 1049 PTPPGRTPDMNTGSSGGTQEHGPGS-----NQPSDKIHSPATSHTSPVSTHLPTPNC 1100
>SB_23832| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 706
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +3
Query: 501 IRLERGGVERTVRFWFKRFRDGNFDLKN*PRGRPPTH 611
+++ GV + + +WF DG+ L RG P +H
Sbjct: 629 VKITNDGVIQALPYWFNMALDGSHTLSTYSRGYPGSH 665
>SB_15410| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1147
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Frame = +1
Query: 166 CHCDDGFLFD-KSGKCVPVDECPDQESDC 249
C C G D SGKC +DEC + C
Sbjct: 927 CTCPKGLRHDPSSGKCKDIDECAEYHHLC 955
>SB_13199| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 259
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/29 (37%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Frame = +1
Query: 166 CHCDDGFLFDKSGK-CVPVDECPDQESDC 249
C C G G CV +DEC + + DC
Sbjct: 123 CECPIGLTLGGGGHACVDIDECAEGKDDC 151
>SB_6742| Best HMM Match : EGF_CA (HMM E-Value=5.40004e-41)
Length = 653
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 4/29 (13%)
Frame = +1
Query: 166 CHCDDGFLF-DKSG---KCVPVDECPDQE 240
C C +G+ F DK +CV +DEC +QE
Sbjct: 429 CSCKEGYTFKDKDPVQKQCVDMDECEEQE 457
>SB_41134| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 802
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 163 TCHCDDGFLFDKSGKCVPVDECPDQE 240
+C C G+ D + KCV +DEC D +
Sbjct: 688 SCLCPQGYRSDWN-KCVDIDECADPQ 712
>SB_40597| Best HMM Match : Dynein_heavy (HMM E-Value=0.55)
Length = 403
Score = 27.9 bits (59), Expect = 6.9
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = -1
Query: 338 DGKWLPSPMDFSNARSRAK-PLPIISRNQLIQSLSWSGHSSTGTHFPDLSNKKPSSQWHV 162
DG P + S +S+ P P+ + +LS +GHS+ F DL + K W
Sbjct: 333 DGFMWIIPGEKSKFKSKPNYPCPVYKTSARRGTLSTTGHSTNFVMFVDLPSDKTERHW-- 390
Query: 161 GSNAATQLVC 132
N L+C
Sbjct: 391 -VNRGVALLC 399
>SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)
Length = 839
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +1
Query: 166 CHCDDGFLFDKSGK-CVPVDECPDQESDC 249
C C+ GF D GK C+ VDEC D + C
Sbjct: 783 CKCNKGFKGD--GKTCLDVDECADGTAMC 809
>SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45)
Length = 3094
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +1
Query: 166 CHCDDGFLFDKSGK-CVPVDECPDQESDC 249
C C+ GF D GK C+ VDEC D + C
Sbjct: 3038 CKCNKGFKGD--GKTCLDVDECADGTAMC 3064
>SB_18560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1937
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +1
Query: 166 CHCDDGFLFDKSGKCVPVDECPDQESDC 249
C C GF K G C+ +DEC + C
Sbjct: 982 CVCRRGFT-KKEGNCINIDECEPGRNRC 1008
>SB_58621| Best HMM Match : RVT_1 (HMM E-Value=1.5e-25)
Length = 1238
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1
Query: 341 PDGKWLPSPMDFSNARSRAKPLPIISRNQLI 249
P G+ LPSP + N+R LP SR+ L+
Sbjct: 1058 PLGQTLPSPAELLNSRIYQSNLPATSRHALL 1088
>SB_30130| Best HMM Match : Cadherin (HMM E-Value=0.0035)
Length = 391
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 58 EKDCPENSHLTMNPCAPTCEDPDLTHTSCVAALL 159
+K+ PENS + +C+DP++ SC +L
Sbjct: 304 KKEVPENSEIGTFVGTLSCKDPEMPDDSCTFKIL 337
>SB_27746| Best HMM Match : MAM (HMM E-Value=1.4013e-45)
Length = 622
Score = 27.5 bits (58), Expect = 9.1
Identities = 9/28 (32%), Positives = 13/28 (46%)
Frame = +1
Query: 166 CHCDDGFLFDKSGKCVPVDECPDQESDC 249
C C SG+C+P + E+DC
Sbjct: 217 CSCPSNMFLCPSGECIPTTALCNNENDC 244
>SB_27178| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 6/36 (16%)
Frame = +1
Query: 166 CHCDDGFLFDKSGKCVPVDECPD------QESDCIN 255
C C DG+ D +C V+EC Q S+C+N
Sbjct: 152 CKCPDGYEADGPHRCKDVNECMTFHECDYQTSECVN 187
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,694,128
Number of Sequences: 59808
Number of extensions: 447239
Number of successful extensions: 1506
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1359
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1504
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1499981500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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