Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0365
(611 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g65970.1 68418.m08305 seven transmembrane MLO family protein ... 34 0.065
At2g21235.1 68415.m02522 bZIP protein-related similar to VirE2-i... 32 0.26
At2g34940.1 68415.m04289 vacuolar sorting receptor, putative sim... 31 0.80
At1g49270.1 68414.m05524 protein kinase family protein contains ... 29 1.8
At3g52850.1 68416.m05824 vacuolar sorting receptor, putative nea... 29 2.4
At2g14740.2 68415.m01663 vacuolar sorting receptor, putative nea... 29 2.4
At2g14740.1 68415.m01662 vacuolar sorting receptor, putative nea... 29 2.4
At1g30900.1 68414.m03780 vacuolar sorting receptor, putative sim... 29 2.4
At5g02030.1 68418.m00123 homeodomain protein (BELLRINGER) severa... 28 4.2
At2g43240.1 68415.m05374 nucleotide-sugar transporter family pro... 28 5.6
At2g37160.1 68415.m04559 transducin family protein / WD-40 repea... 28 5.6
At2g14720.2 68415.m01657 vacuolar sorting receptor, putative ide... 28 5.6
At2g14720.1 68415.m01656 vacuolar sorting receptor, putative ide... 28 5.6
At3g13760.1 68416.m01736 DC1 domain-containing protein contains ... 27 7.4
At1g50250.1 68414.m05634 cell division protein ftsH homolog 1, c... 27 7.4
At1g21570.1 68414.m02697 zinc finger (CCCH-type) family protein ... 27 7.4
At5g65380.1 68418.m08223 ripening-responsive protein, putative s... 27 9.8
At5g45250.1 68418.m05553 disease resistance protein (TIR-NBS-LRR... 27 9.8
At3g19390.1 68416.m02459 cysteine proteinase, putative / thiol p... 27 9.8
At2g30290.1 68415.m03687 vacuolar sorting receptor, putative sim... 27 9.8
>At5g65970.1 68418.m08305 seven transmembrane MLO family protein /
MLO-like protein 10 (MLO10) identical to membrane
protein Mlo10 [Arabidopsis thaliana]
gi|14091590|gb|AAK53803; similar to MLO protein
SWISS-PROT:P93766, NCBI_gi:1877221 [Hordeum
vulgare][Barley]
Length = 569
Score = 34.3 bits (75), Expect = 0.065
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +1
Query: 70 PENSHLTMNPC-APTCEDPDLTHTSCVAALLPTCHCDDG 183
PE + +M PC AP+ D D TH +AA + CD+G
Sbjct: 111 PEKAAASMLPCPAPSTHDQDKTHRRRLAAATTSSRCDEG 149
>At2g21235.1 68415.m02522 bZIP protein-related similar to
VirE2-interacting protein VIP1 [Arabidopsis thaliana]
GI:7258340, tbZIP transcription factor [Arabidopsis
thaliana] GI:17065884
Length = 550
Score = 32.3 bits (70), Expect = 0.26
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = -1
Query: 368 LLGRRAYGPPDGKWLPSPMDFSNARSRAKPLPIISRNQLIQSLSWSGHSSTGTHFPDLSN 189
L GR ++ P + S + S S P P+ S N +++S S GH S H ++SN
Sbjct: 200 LFGRDSF-PRSNRGKGSLIHRSPVLSVLPPAPVYSSNPMVRS-SPPGHPSPSAHLEEMSN 257
Query: 188 KKP 180
+ P
Sbjct: 258 RPP 260
>At2g34940.1 68415.m04289 vacuolar sorting receptor, putative
similar to BP-80 vacuolar sorting receptor [Pisum
sativum] GI:1737222
Length = 618
Score = 30.7 bits (66), Expect = 0.80
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 127 LTHTSCVAALLPTCHCDDGFLFDKSGKCVPVDECPDQES 243
LT +SC + C C GFL D KC +DEC ++ +
Sbjct: 484 LTFSSCSDSETSGCRCPLGFLGD-GLKCEDIDECKEKSA 521
>At1g49270.1 68414.m05524 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 699
Score = 29.5 bits (63), Expect = 1.8
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = -1
Query: 344 PPDGKWLPSPMDFSNARSRAKPLPIISRNQLIQSLSWSGHSSTGTHFPDLSNKKPS 177
PP G W P P + P P+ +IQS S + S+G + P L PS
Sbjct: 268 PPPGNWQPMP---------SPPAPVSGGANVIQSGEMSSNFSSGPYAPSLPPPHPS 314
>At3g52850.1 68416.m05824 vacuolar sorting receptor, putative nearly
identical to vacuolar sorting receptor homolog
(GP:1737218) [Arabidopsis thaliana]
Length = 623
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 130 THTSCVAALLPTCHCDDGFLFDKSGKCVPVDECPDQ 237
T+++CV C C GF D C VDEC ++
Sbjct: 484 TYSACVDDHSKDCKCPLGFKGDGVKNCEDVDECKEK 519
>At2g14740.2 68415.m01663 vacuolar sorting receptor, putative nearly
identical to vacuolar sorting receptor homolog
[Arabidopsis thaliana] GI:1737220; contains a
calcium-binding EGF-like domain signature
Length = 628
Score = 29.1 bits (62), Expect = 2.4
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +1
Query: 136 TSCVAALLPTCHCDDGFLFDKSGKCVPVDECPDQES 243
++CV C C GF D + KC ++EC ++++
Sbjct: 491 SACVDKDSVKCECPPGFKGDGTKKCEDINECKEKKA 526
>At2g14740.1 68415.m01662 vacuolar sorting receptor, putative nearly
identical to vacuolar sorting receptor homolog
[Arabidopsis thaliana] GI:1737220; contains a
calcium-binding EGF-like domain signature
Length = 628
Score = 29.1 bits (62), Expect = 2.4
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +1
Query: 136 TSCVAALLPTCHCDDGFLFDKSGKCVPVDECPDQES 243
++CV C C GF D + KC ++EC ++++
Sbjct: 491 SACVDKDSVKCECPPGFKGDGTKKCEDINECKEKKA 526
>At1g30900.1 68414.m03780 vacuolar sorting receptor, putative
similar to BP-80 vacuolar sorting receptor [Pisum
sativum] GI:1737222
Length = 631
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +1
Query: 127 LTHTSCVAALLPTCHCDDGFLFDKSGKCVPVDECPDQES 243
LT ++C C C GF D KC +DEC +Q +
Sbjct: 485 LTFSACSNLETSGCRCPPGFKGDGL-KCEDIDECKEQSA 522
>At5g02030.1 68418.m00123 homeodomain protein (BELLRINGER) several
homeodomain proteins;
Length = 575
Score = 28.3 bits (60), Expect = 4.2
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -1
Query: 263 RNQLIQSLSWSGHSSTGTHFPDLSNKKPSS 174
++Q S SW ++ T FPD SN PSS
Sbjct: 421 QSQRSSSSSWRDERTSTTVFPDNSNNNPSS 450
>At2g43240.1 68415.m05374 nucleotide-sugar transporter family
protein weak similarity to SP|P78382 CMP-sialic acid
transporter {Homo sapiens}; contains Pfam profile
PF04142: Nucleotide-sugar transporter
Length = 787
Score = 27.9 bits (59), Expect = 5.6
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +1
Query: 133 HTSCVAALLPTCHCDDGFLFDKSGKCVPVDE 225
H S V A+ +C+C+D SG C ++
Sbjct: 125 HFSAVPAIFQSCYCEDAQQSKSSGDCCTTED 155
>At2g37160.1 68415.m04559 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 544
Score = 27.9 bits (59), Expect = 5.6
Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = -1
Query: 194 SNKKPSSQWHVGSNAATQLVCVRSGS--SQVGAQGFIVK*EFSGQ 66
S P ++WH+G A + G+ + VG G++ +FS Q
Sbjct: 291 SKSNPVARWHIGQGAINSIAFSNDGAYLATVGRDGYLRIFDFSTQ 335
>At2g14720.2 68415.m01657 vacuolar sorting receptor, putative
identical to GB:U79960 GI:1737220; contains a
calcium-binding EGF-like domain signature
Length = 628
Score = 27.9 bits (59), Expect = 5.6
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +1
Query: 136 TSCVAALLPTCHCDDGFLFDKSGKCVPVDECPDQES 243
++CV C C GF D KC ++EC ++++
Sbjct: 491 SACVDKDSVKCECPPGFKGDGVKKCEDINECKEKKA 526
>At2g14720.1 68415.m01656 vacuolar sorting receptor, putative
identical to GB:U79960 GI:1737220; contains a
calcium-binding EGF-like domain signature
Length = 628
Score = 27.9 bits (59), Expect = 5.6
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +1
Query: 136 TSCVAALLPTCHCDDGFLFDKSGKCVPVDECPDQES 243
++CV C C GF D KC ++EC ++++
Sbjct: 491 SACVDKDSVKCECPPGFKGDGVKKCEDINECKEKKA 526
>At3g13760.1 68416.m01736 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 652
Score = 27.5 bits (58), Expect = 7.4
Identities = 12/45 (26%), Positives = 17/45 (37%)
Frame = +1
Query: 34 SRSQPGSVEKDCPENSHLTMNPCAPTCEDPDLTHTSCVAALLPTC 168
S P + + + N C TC P + T C A+ TC
Sbjct: 469 SHEHPVVISTSYSDTDEILCNACQGTCWQPHIKCTKCDFAMCYTC 513
>At1g50250.1 68414.m05634 cell division protein ftsH homolog 1,
chloroplast (FTSH1) (FTSH) identical to SP:Q39102 Cell
division protein ftsH homolog 1, chloroplast
precursor (EC 3.4.24.-) [Arabidopsis thaliana]
Length = 716
Score = 27.5 bits (58), Expect = 7.4
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = -1
Query: 368 LLGRRAYGPPDGK--WLPSPMDFSNARSRAKPLP 273
LL RRA G P G L PMDF ++S+ + +P
Sbjct: 222 LLFRRAQGGPGGGPGGLGGPMDFGRSKSKFQEVP 255
>At1g21570.1 68414.m02697 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 470
Score = 27.5 bits (58), Expect = 7.4
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +1
Query: 13 PARIPDGSRSQPGSVEKDCPENSHLTMNPCAPTCE 117
P R+PD S G + H+ +NP AP C+
Sbjct: 295 PERMPDCSYYLQGLCNNEACPYRHVHVNPIAPICD 329
>At5g65380.1 68418.m08223 ripening-responsive protein, putative
similar to ripening regulated protein DDTFR18
[Lycopersicon esculentum] GI:12231296; contains Pfam
profile PF01554: Uncharacterized membrane protein family
Length = 486
Score = 27.1 bits (57), Expect = 9.8
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = -3
Query: 303 QCQEQSQAAAYYKSESVDTVTLLVWTFINGYAFSRFVEQEAIITVACW 160
QCQ +++ AY + ++ L+ W F++G V A I+++ W
Sbjct: 182 QCQLKNRVTAYAAAVALVVHILVCWLFVDGLKLG-VVGTVATISISWW 228
>At5g45250.1 68418.m05553 disease resistance protein (TIR-NBS-LRR
class), putative (RPS4) domain signature TIR-NBS-LRR
exists, suggestive of a disease resistance protein.
Identical to RPS4 (GI:11357255). False intron created at
intron 2 to escape a frameshift in the BAC sequence.
Length = 1217
Score = 27.1 bits (57), Expect = 9.8
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = -2
Query: 136 CVSGLDLHRSARRGSLSNENSQDNLFQPNLAGCESHQGYEQE 11
C+ +DL+ S++ SLS + + L + NL GC + + + +
Sbjct: 661 CLRWVDLNHSSKLCSLSGLSKAEKLQRLNLEGCTTLKAFPHD 702
>At3g19390.1 68416.m02459 cysteine proteinase, putative / thiol
protease, putative contains similarity to cysteine
proteinase RD21A (thiol protease) GI:435619, SP:P43297
from [Arabidopsis thaliana]
Length = 452
Score = 27.1 bits (57), Expect = 9.8
Identities = 15/52 (28%), Positives = 21/52 (40%)
Frame = +1
Query: 94 NPCAPTCEDPDLTHTSCVAALLPTCHCDDGFLFDKSGKCVPVDECPDQESDC 249
NP P P + S TC C L++ +GKC CP + + C
Sbjct: 351 NPPKPPAPSPVVCDKSNTCPAKSTCCC----LYEYNGKCYSWGCCPYESATC 398
>At2g30290.1 68415.m03687 vacuolar sorting receptor, putative
similar to vacuolar sorting receptor homolog
[Arabidopsis thaliana] GI:1737218
Length = 625
Score = 27.1 bits (57), Expect = 9.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +1
Query: 130 THTSCVAALLPTCHCDDGFLFDKSGKCVPVDECPDQ 237
T+++C C C GF+ D +C V+EC ++
Sbjct: 488 TYSACRDDHSKGCKCPPGFIGDGLKECKDVNECEEK 523
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,399,583
Number of Sequences: 28952
Number of extensions: 306831
Number of successful extensions: 972
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 937
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 971
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1226538000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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