Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0363
(558 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y08686-1|CAA69942.1| 562|Homo sapiens serine palmitoyltransfera... 58 2e-08
BC005123-1|AAH05123.1| 562|Homo sapiens serine palmitoyltransfe... 58 2e-08
AF111168-5|AAD09621.1| 562|Homo sapiens serine palmitoyl transf... 58 2e-08
AB011098-1|BAA25452.2| 609|Homo sapiens KIAA0526 protein protein. 58 2e-08
AL445589-1|CAM16427.1| 552|Homo sapiens serine palmitoyltransfe... 55 1e-07
AL133331-1|CAM13116.1| 552|Homo sapiens serine palmitoyltransfe... 55 1e-07
AL109983-2|CAM28300.1| 552|Homo sapiens serine palmitoyltransfe... 55 1e-07
AL050320-2|CAM27358.1| 552|Homo sapiens serine palmitoyltransfe... 55 1e-07
AL109983-1|CAI22514.2| 120|Homo sapiens serine palmitoyltransfe... 46 7e-05
AL050320-1|CAD54807.3| 120|Homo sapiens serine palmitoyltransfe... 46 7e-05
AK075271-1|BAC11509.1| 134|Homo sapiens protein ( Homo sapiens ... 46 7e-05
AL022328-8|CAB63045.1| 770|Homo sapiens protein ( Human DNA seq... 29 8.4
>Y08686-1|CAA69942.1| 562|Homo sapiens serine palmitoyltransferase,
subunit II protein.
Length = 562
Score = 58.0 bits (134), Expect = 2e-08
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Frame = +1
Query: 322 GPRRLVQWLRAHGHAHGYAHSMSCXXXXXXXXXXXXXXXXXXXXR----VRALAQNTAYF 489
G + L+ +LR H H+ YA S+S V+ LA+NT YF
Sbjct: 390 GKKELIDYLRTHSHSAVYATSLSPPVVEQIITSMKCIMGQDGTSLGKECVQQLAENTRYF 449
Query: 490 RRRLRELGVVTFGHDDSPVVPML 558
RRRL+E+G + +G++DSPVVP++
Sbjct: 450 RRRLKEMGFIIYGNEDSPVVPLM 472
>BC005123-1|AAH05123.1| 562|Homo sapiens serine
palmitoyltransferase, long chain base subunit 2 protein.
Length = 562
Score = 58.0 bits (134), Expect = 2e-08
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Frame = +1
Query: 322 GPRRLVQWLRAHGHAHGYAHSMSCXXXXXXXXXXXXXXXXXXXXR----VRALAQNTAYF 489
G + L+ +LR H H+ YA S+S V+ LA+NT YF
Sbjct: 390 GKKELIDYLRTHSHSAVYATSLSPPVVEQIITSMKCIMGQDGTSLGKECVQQLAENTRYF 449
Query: 490 RRRLRELGVVTFGHDDSPVVPML 558
RRRL+E+G + +G++DSPVVP++
Sbjct: 450 RRRLKEMGFIIYGNEDSPVVPLM 472
>AF111168-5|AAD09621.1| 562|Homo sapiens serine palmitoyl
transferase, subunit II protein.
Length = 562
Score = 58.0 bits (134), Expect = 2e-08
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Frame = +1
Query: 322 GPRRLVQWLRAHGHAHGYAHSMSCXXXXXXXXXXXXXXXXXXXXR----VRALAQNTAYF 489
G + L+ +LR H H+ YA S+S V+ LA+NT YF
Sbjct: 390 GKKELIDYLRTHSHSAVYATSLSPPVVEQIITSMKCIMGQDGTSLGKECVQQLAENTRYF 449
Query: 490 RRRLRELGVVTFGHDDSPVVPML 558
RRRL+E+G + +G++DSPVVP++
Sbjct: 450 RRRLKEMGFIIYGNEDSPVVPLM 472
>AB011098-1|BAA25452.2| 609|Homo sapiens KIAA0526 protein protein.
Length = 609
Score = 58.0 bits (134), Expect = 2e-08
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Frame = +1
Query: 322 GPRRLVQWLRAHGHAHGYAHSMSCXXXXXXXXXXXXXXXXXXXXR----VRALAQNTAYF 489
G + L+ +LR H H+ YA S+S V+ LA+NT YF
Sbjct: 437 GKKELIDYLRTHSHSAVYATSLSPPVVEQIITSMKCIMGQDGTSLGKECVQQLAENTRYF 496
Query: 490 RRRLRELGVVTFGHDDSPVVPML 558
RRRL+E+G + +G++DSPVVP++
Sbjct: 497 RRRLKEMGFIIYGNEDSPVVPLM 519
>AL445589-1|CAM16427.1| 552|Homo sapiens serine
palmitoyltransferase, long chain base subunit 2-like
(aminotransferase 2 protein.
Length = 552
Score = 55.2 bits (127), Expect = 1e-07
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Frame = +1
Query: 319 AGPRRLVQWLRAHGHAHGYAHSMSCXXXXXXXXXXXXXXXXXXXX----RVRALAQNTAY 486
AG + LV +LR H H+ YA SMS RV+ LA+NT Y
Sbjct: 381 AGRKDLVDYLRVHSHSAVYASSMSPPIAEQIIRSLKLIMGLDGTTQGLQRVQQLAKNTRY 440
Query: 487 FRRRLRELGVVTFGHDDSPVVPML 558
FR+RL+E+G + +G++++ VVP+L
Sbjct: 441 FRQRLQEMGFIIYGNENASVVPLL 464
>AL133331-1|CAM13116.1| 552|Homo sapiens serine
palmitoyltransferase, long chain base subunit 2-like
(aminotransferase 2 protein.
Length = 552
Score = 55.2 bits (127), Expect = 1e-07
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Frame = +1
Query: 319 AGPRRLVQWLRAHGHAHGYAHSMSCXXXXXXXXXXXXXXXXXXXX----RVRALAQNTAY 486
AG + LV +LR H H+ YA SMS RV+ LA+NT Y
Sbjct: 381 AGRKDLVDYLRVHSHSAVYASSMSPPIAEQIIRSLKLIMGLDGTTQGLQRVQQLAKNTRY 440
Query: 487 FRRRLRELGVVTFGHDDSPVVPML 558
FR+RL+E+G + +G++++ VVP+L
Sbjct: 441 FRQRLQEMGFIIYGNENASVVPLL 464
>AL109983-2|CAM28300.1| 552|Homo sapiens serine
palmitoyltransferase, long chain base subunit 2-like
(aminotransferase 2 protein.
Length = 552
Score = 55.2 bits (127), Expect = 1e-07
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Frame = +1
Query: 319 AGPRRLVQWLRAHGHAHGYAHSMSCXXXXXXXXXXXXXXXXXXXX----RVRALAQNTAY 486
AG + LV +LR H H+ YA SMS RV+ LA+NT Y
Sbjct: 381 AGRKDLVDYLRVHSHSAVYASSMSPPIAEQIIRSLKLIMGLDGTTQGLQRVQQLAKNTRY 440
Query: 487 FRRRLRELGVVTFGHDDSPVVPML 558
FR+RL+E+G + +G++++ VVP+L
Sbjct: 441 FRQRLQEMGFIIYGNENASVVPLL 464
>AL050320-2|CAM27358.1| 552|Homo sapiens serine
palmitoyltransferase, long chain base subunit 2-like
(aminotransferase 2 protein.
Length = 552
Score = 55.2 bits (127), Expect = 1e-07
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Frame = +1
Query: 319 AGPRRLVQWLRAHGHAHGYAHSMSCXXXXXXXXXXXXXXXXXXXX----RVRALAQNTAY 486
AG + LV +LR H H+ YA SMS RV+ LA+NT Y
Sbjct: 381 AGRKDLVDYLRVHSHSAVYASSMSPPIAEQIIRSLKLIMGLDGTTQGLQRVQQLAKNTRY 440
Query: 487 FRRRLRELGVVTFGHDDSPVVPML 558
FR+RL+E+G + +G++++ VVP+L
Sbjct: 441 FRQRLQEMGFIIYGNENASVVPLL 464
>AL109983-1|CAI22514.2| 120|Homo sapiens serine
palmitoyltransferase, long chain base subunit 2-like
(aminotransferase 2 protein.
Length = 120
Score = 46.4 bits (105), Expect = 7e-05
Identities = 18/35 (51%), Positives = 30/35 (85%)
Frame = +1
Query: 454 RVRALAQNTAYFRRRLRELGVVTFGHDDSPVVPML 558
RV+ LA+NT YFR+RL+E+G + +G++++ VVP+L
Sbjct: 27 RVQQLAKNTRYFRQRLQEMGFIIYGNENASVVPLL 61
>AL050320-1|CAD54807.3| 120|Homo sapiens serine
palmitoyltransferase, long chain base subunit 2-like
(aminotransferase 2 protein.
Length = 120
Score = 46.4 bits (105), Expect = 7e-05
Identities = 18/35 (51%), Positives = 30/35 (85%)
Frame = +1
Query: 454 RVRALAQNTAYFRRRLRELGVVTFGHDDSPVVPML 558
RV+ LA+NT YFR+RL+E+G + +G++++ VVP+L
Sbjct: 27 RVQQLAKNTRYFRQRLQEMGFIIYGNENASVVPLL 61
>AK075271-1|BAC11509.1| 134|Homo sapiens protein ( Homo sapiens
cDNA FLJ90790 fis, clone THYRO1001529, moderately
similar to Serine palmitoyltransferase 2 (EC 2.3.1.50).
).
Length = 134
Score = 46.4 bits (105), Expect = 7e-05
Identities = 18/35 (51%), Positives = 30/35 (85%)
Frame = +1
Query: 454 RVRALAQNTAYFRRRLRELGVVTFGHDDSPVVPML 558
RV+ LA+NT YFR+RL+E+G + +G++++ VVP+L
Sbjct: 12 RVQQLAKNTRYFRQRLQEMGFIIYGNENASVVPLL 46
>AL022328-8|CAB63045.1| 770|Homo sapiens protein ( Human DNA
sequence from clone RP3-402G11 on chromosome
22q13.31-13.33. ).
Length = 770
Score = 29.5 bits (63), Expect = 8.4
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +2
Query: 494 AGCASWAW*RSGTTTRRWCP 553
AG ASW W RSG TT P
Sbjct: 327 AGAASWGWERSGATTSSEAP 346
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,915,462
Number of Sequences: 237096
Number of extensions: 1117803
Number of successful extensions: 6406
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 6275
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6406
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5590411794
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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