Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0363
         (558 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY095191-1|AAM12284.1|  597|Drosophila melanogaster LD36009p pro...    70   2e-12
AE014134-2606|AAF53465.1|  597|Drosophila melanogaster CG4162-PA...    70   2e-12
AB017359-1|BAA83721.1|  597|Drosophila melanogaster serine palmi...    70   2e-12
AE014134-552|AAF51148.1| 2438|Drosophila melanogaster CG3523-PA ...    28   7.4  
BT023900-1|ABA81834.1| 1576|Drosophila melanogaster LP13775p pro...    28   9.8  
AE013599-1871|AAF58260.1|  856|Drosophila melanogaster CG13942-P...    28   9.8  

>AY095191-1|AAM12284.1|  597|Drosophila melanogaster LD36009p
           protein.
          Length = 597

 Score = 70.1 bits (164), Expect = 2e-12
 Identities = 36/84 (42%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
 Frame = +1

Query: 319 AGPRRLVQWLRAHGHAHGYAHSMSCXXXXXXXXXXXXXXXXXXXX----RVRALAQNTAY 486
           AG ++L+ +LR + HAH YA S+S                         ++  LA+NT Y
Sbjct: 435 AGSKKLIDFLRTNSHAHCYAASISPPIAQQILTSMKTIMGEDGTDIGRKKIHQLARNTRY 494

Query: 487 FRRRLRELGVVTFGHDDSPVVPML 558
           FRRRL +LGV+T+GH+DSPVVPML
Sbjct: 495 FRRRLAQLGVITYGHEDSPVVPML 518


>AE014134-2606|AAF53465.1|  597|Drosophila melanogaster CG4162-PA
           protein.
          Length = 597

 Score = 70.1 bits (164), Expect = 2e-12
 Identities = 36/84 (42%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
 Frame = +1

Query: 319 AGPRRLVQWLRAHGHAHGYAHSMSCXXXXXXXXXXXXXXXXXXXX----RVRALAQNTAY 486
           AG ++L+ +LR + HAH YA S+S                         ++  LA+NT Y
Sbjct: 435 AGSKKLIDFLRTNSHAHCYAASISPPIAQQILTSMKTIMGEDGTDIGRKKIHQLARNTRY 494

Query: 487 FRRRLRELGVVTFGHDDSPVVPML 558
           FRRRL +LGV+T+GH+DSPVVPML
Sbjct: 495 FRRRLAQLGVITYGHEDSPVVPML 518


>AB017359-1|BAA83721.1|  597|Drosophila melanogaster serine
           palmitoyl transferase LCB2subunit protein.
          Length = 597

 Score = 70.1 bits (164), Expect = 2e-12
 Identities = 36/84 (42%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
 Frame = +1

Query: 319 AGPRRLVQWLRAHGHAHGYAHSMSCXXXXXXXXXXXXXXXXXXXX----RVRALAQNTAY 486
           AG ++L+ +LR + HAH YA S+S                         ++  LA+NT Y
Sbjct: 435 AGSKKLIDFLRTNSHAHCYAASISPPIAQQILTSMKTIMGEDGTDIGRKKIHQLARNTRY 494

Query: 487 FRRRLRELGVVTFGHDDSPVVPML 558
           FRRRL +LGV+T+GH+DSPVVPML
Sbjct: 495 FRRRLAQLGVITYGHEDSPVVPML 518


>AE014134-552|AAF51148.1| 2438|Drosophila melanogaster CG3523-PA
           protein.
          Length = 2438

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = -3

Query: 286 WYFISNKGQKWANFMSKLFVLEKLCLIFSRC 194
           WY  S  G +WA+    L  +E       RC
Sbjct: 531 WYIYSGMGSQWASMAKDLMKIEAFAKTIQRC 561


>BT023900-1|ABA81834.1| 1576|Drosophila melanogaster LP13775p
           protein.
          Length = 1576

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 9/13 (69%), Positives = 12/13 (92%)
 Frame = +1

Query: 352 AHGHAHGYAHSMS 390
           +HGH+HG+AHS S
Sbjct: 203 SHGHSHGHAHSAS 215


>AE013599-1871|AAF58260.1|  856|Drosophila melanogaster CG13942-PA
           protein.
          Length = 856

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 9/13 (69%), Positives = 12/13 (92%)
 Frame = +1

Query: 352 AHGHAHGYAHSMS 390
           +HGH+HG+AHS S
Sbjct: 141 SHGHSHGHAHSAS 153


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,000,953
Number of Sequences: 53049
Number of extensions: 317406
Number of successful extensions: 1797
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1767
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2151905496
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)