Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0359
(708 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q0WX42 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 284 1e-75
UniRef50_P18929 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 259 4e-68
UniRef50_P92111 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 213 5e-54
UniRef50_Q68RL2 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 200 3e-50
UniRef50_Q37546 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 196 6e-49
UniRef50_Q8HET7 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 195 1e-48
UniRef50_Q6JT33 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 195 1e-48
UniRef50_P03886 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 191 2e-47
UniRef50_Q8HQJ2 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 187 2e-46
UniRef50_Q8HQ04 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 187 2e-46
UniRef50_Q9MIZ0 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 186 4e-46
UniRef50_Q6JCT2 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 186 6e-46
UniRef50_Q0QJ87 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 184 3e-45
UniRef50_Q68RK6 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 183 3e-45
UniRef50_P48899 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 182 1e-44
UniRef50_P48897 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 180 4e-44
UniRef50_Q766W0 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 179 7e-44
UniRef50_Q4L1B9 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 179 7e-44
UniRef50_O99824 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 177 2e-43
UniRef50_Q96186 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 177 3e-43
UniRef50_Q6E0W1 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 176 4e-43
UniRef50_P34847 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 174 2e-42
UniRef50_Q94QP9 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 173 4e-42
UniRef50_P92558 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 173 5e-42
UniRef50_Q1W1N4 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 170 3e-41
UniRef50_Q00860 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 169 4e-41
UniRef50_Q8M6U9 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 163 4e-39
UniRef50_Q64LH8 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 163 5e-39
UniRef50_Q9B8G7 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 159 6e-38
UniRef50_Q37381 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 157 2e-37
UniRef50_Q06SB9 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 156 4e-37
UniRef50_Q15K54 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 155 8e-37
UniRef50_A7KCS7 Cluster: NADH dehydrogenase subunit 1; n=4; Dika... 153 3e-36
UniRef50_Q3T4B4 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 153 4e-36
UniRef50_Q85UH6 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 152 9e-36
UniRef50_Q0H8X5 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 152 9e-36
UniRef50_Q8WF33 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 151 2e-35
UniRef50_Q2YA20 Cluster: NADH-quinone oxidoreductase subunit H 2... 148 2e-34
UniRef50_Q6EF18 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 147 3e-34
UniRef50_Q4W8E1 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 146 4e-34
UniRef50_P08774 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 146 5e-34
UniRef50_P24887 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 146 5e-34
UniRef50_P24875 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 146 5e-34
UniRef50_Q2QAT5 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 144 2e-33
UniRef50_Q82TV0 Cluster: NADH-quinone oxidoreductase subunit H; ... 142 8e-33
UniRef50_Q68PI9 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 141 1e-32
UniRef50_Q2HJL2 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 141 1e-32
UniRef50_Q950Q6 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 141 1e-32
UniRef50_Q6VEI0 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 141 2e-32
UniRef50_Q2RYV5 Cluster: NADH-quinone oxidoreductase subunit H; ... 140 3e-32
UniRef50_Q9ZY22 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 137 3e-31
UniRef50_Q00L96 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 136 4e-31
UniRef50_Q6SL32 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 136 5e-31
UniRef50_Q9T7K1 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 135 9e-31
UniRef50_Q9B8A1 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 135 1e-30
UniRef50_A5UVG2 Cluster: NADH dehydrogenase; n=5; Chloroflexi (c... 134 2e-30
UniRef50_Q3ZXR7 Cluster: NADH-quinone oxidoreductase subunit H; ... 134 3e-30
UniRef50_Q1AVI7 Cluster: NADH-quinone oxidoreductase subunit H; ... 132 6e-30
UniRef50_A2D6E8 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 132 1e-29
UniRef50_Q9T9H0 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 131 1e-29
UniRef50_Q8F7Q5 Cluster: NADH-quinone oxidoreductase subunit H; ... 131 1e-29
UniRef50_A3RE56 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 129 8e-29
UniRef50_Q5KUJ9 Cluster: NADH-quinone oxidoreductase subunit H; ... 129 8e-29
UniRef50_A0LJM4 Cluster: NADH-quinone oxidoreductase subunit H 2... 126 4e-28
UniRef50_Q5W905 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 124 2e-27
UniRef50_A0LRI8 Cluster: NADH-quinone oxidoreductase subunit H; ... 123 4e-27
UniRef50_Q9RU94 Cluster: NADH-quinone oxidoreductase subunit H; ... 122 9e-27
UniRef50_Q4FU58 Cluster: NADH-quinone oxidoreductase subunit H; ... 122 1e-26
UniRef50_Q81K04 Cluster: NADH-quinone oxidoreductase subunit H; ... 121 2e-26
UniRef50_Q5YWD4 Cluster: NADH-quinone oxidoreductase subunits H/... 121 2e-26
UniRef50_P48901 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 121 2e-26
UniRef50_Q1IS58 Cluster: NADH-quinone oxidoreductase subunit H 1... 120 3e-26
UniRef50_UPI00015BD35D Cluster: UPI00015BD35D related cluster; n... 120 4e-26
UniRef50_Q7YH66 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 119 6e-26
UniRef50_Q6TY88 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 119 6e-26
UniRef50_Q1K3R5 Cluster: Respiratory-chain NADH dehydrogenase, s... 118 1e-25
UniRef50_O79868 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 118 1e-25
UniRef50_A3THI6 Cluster: NADH dehydrogenase subunit H; n=2; cell... 116 4e-25
UniRef50_Q9T9L2 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 116 4e-25
UniRef50_Q9EV66 Cluster: NADH-quinone oxidoreductase subunit H 2... 116 4e-25
UniRef50_Q5DKX5 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 116 6e-25
UniRef50_Q0Z876 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 116 6e-25
UniRef50_A4G637 Cluster: NADH-quinone oxidoreductase subunit H; ... 116 6e-25
UniRef50_Q1IS40 Cluster: NADH-quinone oxidoreductase subunit H 2... 115 1e-24
UniRef50_Q67KP0 Cluster: NADH-quinone oxidoreductase subunit H 2... 115 1e-24
UniRef50_A6H1Q6 Cluster: NADH-quinone oxidoreductase subunit H; ... 114 2e-24
UniRef50_Q1HBD8 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 113 4e-24
UniRef50_Q8KEB9 Cluster: NADH-quinone oxidoreductase subunit H; ... 112 9e-24
UniRef50_P11658 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 111 1e-23
UniRef50_A0RMD5 Cluster: NAD(P)H-quinone oxidoreductase chain 1 ... 111 2e-23
UniRef50_P42032 Cluster: NADH-quinone oxidoreductase subunit H; ... 111 2e-23
UniRef50_Q8A0F7 Cluster: NADH-quinone oxidoreductase subunit H; ... 109 7e-23
UniRef50_Q02CT6 Cluster: NADH-quinone oxidoreductase subunit H 1... 109 7e-23
UniRef50_Q9A6Y1 Cluster: NADH-quinone oxidoreductase subunit H; ... 108 1e-22
UniRef50_O67336 Cluster: NADH-quinone oxidoreductase subunit H; ... 108 2e-22
UniRef50_Q67P15 Cluster: NADH-quinone oxidoreductase subunit H 1... 108 2e-22
UniRef50_A3QRI2 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 107 2e-22
UniRef50_Q6N1Z4 Cluster: NADH-quinone oxidoreductase subunit H 2... 106 5e-22
UniRef50_Q2IL15 Cluster: NADH-quinone oxidoreductase subunit H; ... 105 8e-22
UniRef50_Q1HBB1 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 103 3e-21
UniRef50_Q9B8Z5 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 103 4e-21
UniRef50_Q8WAI8 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 103 6e-21
UniRef50_A4GJ19 Cluster: Putative respiratory-chain NADH dehydro... 102 8e-21
UniRef50_P05513 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 101 2e-20
UniRef50_A1Z3A0 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 99 5e-20
UniRef50_Q0LPS5 Cluster: Respiratory-chain NADH dehydrogenase, s... 100 7e-20
UniRef50_Q9B893 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 98 2e-19
UniRef50_Q6G395 Cluster: NADH-quinone oxidoreductase subunit H; ... 97 3e-19
UniRef50_Q8PU59 Cluster: F(420)H(2) oxidoreductase subunit H (F(... 97 3e-19
UniRef50_A7BBX4 Cluster: Putative uncharacterized protein; n=1; ... 97 5e-19
UniRef50_Q5DNB6 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 97 5e-19
UniRef50_Q6XZ11 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 96 7e-19
UniRef50_Q37165 Cluster: NAD(P)H-quinone oxidoreductase subunit ... 96 9e-19
UniRef50_Q9T6M0 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 95 2e-18
UniRef50_Q9PMA3 Cluster: NADH-quinone oxidoreductase subunit H; ... 95 2e-18
UniRef50_A7CXQ4 Cluster: NADH dehydrogenase; n=1; Opitutaceae ba... 94 3e-18
UniRef50_A5UXK5 Cluster: NADH dehydrogenase; n=2; Roseiflexus|Re... 94 3e-18
UniRef50_Q7YCX1 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 94 3e-18
UniRef50_Q11RU2 Cluster: NADH-quinone oxidoreductase subunit H 2... 94 3e-18
UniRef50_Q3E1S2 Cluster: Respiratory-chain NADH dehydrogenase, s... 93 5e-18
UniRef50_Q7YCU4 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 93 6e-18
UniRef50_A6QCF5 Cluster: NADH-quinone oxidoreductase, chain H; n... 89 7e-17
UniRef50_Q6MGN3 Cluster: NADH-quinone oxidoreductase subunit H; ... 89 7e-17
UniRef50_Q979M4 Cluster: NADH dehydrogenase I chain E; n=4; Ther... 88 2e-16
UniRef50_Q8TQP1 Cluster: F(420)H(2) oxidoreductase subunit H (F(... 88 2e-16
UniRef50_Q6ANM8 Cluster: NADH-quinone oxidoreductase subunit H; ... 87 3e-16
UniRef50_A2Q588 Cluster: NADH-ubiquinone oxidoreductase, chain 4... 84 3e-15
UniRef50_A7KJL0 Cluster: NADH dehydrogenase subunit 1; n=12; Dys... 84 4e-15
UniRef50_A3ZL02 Cluster: NADH dehydrogenase I chain H; n=1; Blas... 78 2e-13
UniRef50_Q6A6G5 Cluster: NADH-quinone oxidoreductase subunit H; ... 75 2e-12
UniRef50_Q70VA3 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 74 4e-12
UniRef50_O79095 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 72 1e-11
UniRef50_A1ALP6 Cluster: Respiratory-chain NADH dehydrogenase, s... 64 2e-11
UniRef50_Q9F2V9 Cluster: NADH dehydrogenase subunit NuoH2; n=5; ... 72 2e-11
UniRef50_Q5YBJ8 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 71 3e-11
UniRef50_Q6LE55 Cluster: NADH ubiquinone oxidoreductase subunit;... 70 6e-11
UniRef50_A0RY69 Cluster: NADH-ubiquinone oxidoreductase, subunit... 70 6e-11
UniRef50_A3E7R3 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 69 9e-11
UniRef50_UPI00015BB094 Cluster: NADH dehydrogenase (quinone); n=... 66 6e-10
UniRef50_A3E7R8 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 66 1e-09
UniRef50_A1RZ42 Cluster: Respiratory-chain NADH dehydrogenase, s... 64 3e-09
UniRef50_A6Q8J6 Cluster: NADH-quinone oxidoreductase, chain H; n... 64 4e-09
UniRef50_A7CUF6 Cluster: NADH dehydrogenase; n=1; Opitutaceae ba... 63 7e-09
UniRef50_Q60IJ1 Cluster: Putative uncharacterized protein CBG249... 63 7e-09
UniRef50_Q09KP1 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 62 1e-08
UniRef50_A7H9V7 Cluster: NADH dehydrogenase (Quinone) precursor;... 59 9e-08
UniRef50_A3MXU6 Cluster: Respiratory-chain NADH dehydrogenase, s... 58 2e-07
UniRef50_Q34148 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 57 4e-07
UniRef50_Q4Z0A0 Cluster: Putative uncharacterized protein; n=2; ... 56 6e-07
UniRef50_Q2WGD5 Cluster: NADH dehydrogenase subunit 1; n=1; Sela... 56 9e-07
UniRef50_A3H7X8 Cluster: Respiratory-chain NADH dehydrogenase, s... 56 9e-07
UniRef50_A1AUU5 Cluster: Respiratory-chain NADH dehydrogenase, s... 56 1e-06
UniRef50_P19040 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 55 1e-06
UniRef50_Q9XMH4 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 55 2e-06
UniRef50_A1RZ51 Cluster: Respiratory-chain NADH dehydrogenase, s... 55 2e-06
UniRef50_A3DJU0 Cluster: Respiratory-chain NADH dehydrogenase, s... 54 3e-06
UniRef50_O28444 Cluster: F420H2:quinone oxidoreductase, 41.2 kDa... 54 3e-06
UniRef50_Q5V276 Cluster: NADH dehydrogenase/oxidoreductase; n=4;... 54 5e-06
UniRef50_A7D3R6 Cluster: Respiratory-chain NADH dehydrogenase, s... 53 8e-06
UniRef50_Q94YW8 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 52 1e-05
UniRef50_A3DMA3 Cluster: Respiratory-chain NADH dehydrogenase, s... 51 3e-05
UniRef50_P08834 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 51 3e-05
UniRef50_A1RWL7 Cluster: Respiratory-chain NADH dehydrogenase, s... 50 7e-05
UniRef50_Q8PUL3 Cluster: Ech Hydrogenase, Subunit; n=3; Methanos... 48 2e-04
UniRef50_Q980H2 Cluster: NADH dehydrogenase subunit H; n=4; Sulf... 48 2e-04
UniRef50_Q8ZWX0 Cluster: NADH-ubiquinone oxidoreductase subunit;... 48 3e-04
UniRef50_Q9YC30 Cluster: NuoH homolog; n=1; Aeropyrum pernix|Rep... 46 0.001
UniRef50_A5FW44 Cluster: Formate hydrogenlyase subunit 4-like pr... 43 0.006
UniRef50_A4XJP3 Cluster: Respiratory-chain NADH dehydrogenase, s... 43 0.009
UniRef50_P15576 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 43 0.009
UniRef50_Q8RDB7 Cluster: NADH:ubiquinone oxidoreductase subunit ... 42 0.020
UniRef50_Q7WT81 Cluster: EchB; n=3; Desulfovibrio|Rep: EchB - De... 41 0.034
UniRef50_Q7GEL5 Cluster: NDH-A protein; n=7; Magnoliophyta|Rep: ... 41 0.034
UniRef50_P77937 Cluster: CooK; n=8; Bacteria|Rep: CooK - Rhodosp... 40 0.045
UniRef50_Q0W3I4 Cluster: Ech hydrogenase, subunit B; n=1; uncult... 40 0.045
UniRef50_Q8THY9 Cluster: Hydrogenase-3 subunit; n=7; cellular or... 39 0.14
UniRef50_Q3JDU8 Cluster: Respiratory-chain NADH dehydrogenase, s... 38 0.24
UniRef50_Q0FXV6 Cluster: NuoH2 NADH chain H; n=1; Fulvimarina pe... 38 0.24
UniRef50_UPI00015BC866 Cluster: UPI00015BC866 related cluster; n... 38 0.32
UniRef50_A3Q532 Cluster: Respiratory-chain NADH dehydrogenase, s... 37 0.42
UniRef50_A0UXN8 Cluster: Respiratory-chain NADH dehydrogenase, s... 37 0.56
UniRef50_Q8TY38 Cluster: Membrane protein related to formate hyd... 37 0.56
UniRef50_Q57940 Cluster: Putative NADH-ubiquinone oxidoreductase... 37 0.56
UniRef50_A6DB52 Cluster: HYDROGENASE-4 COMPONENT C; n=3; Epsilon... 36 0.74
UniRef50_Q1AZS1 Cluster: Respiratory-chain NADH dehydrogenase, s... 36 0.98
UniRef50_A5G4V9 Cluster: Respiratory-chain NADH dehydrogenase, s... 36 1.3
UniRef50_Q37142 Cluster: NADH-ubiquinone oxidoreductase chain 1;... 33 5.2
>UniRef50_Q0WX42 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=44; Protostomia|Rep: NADH-ubiquinone oxidoreductase
chain 1 - Apoda limacodes
Length = 310
Score = 284 bits (697), Expect = 1e-75
Identities = 142/216 (65%), Positives = 154/216 (71%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
AFLTLLERKVLGYIQ+RKGPNK+G IG+LQPFSDAIKLFTKE+TYPNFSNY YYFSPV
Sbjct: 25 AFLTLLERKVLGYIQLRKGPNKLGIIGMLQPFSDAIKLFTKEQTYPNFSNYLSYYFSPVI 84
Query: 240 RFIXXXXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVA 419
F+ +PY FNL+ FNLG+LFF C TSLGVY+V+IAGWSSNSNYALLGGLR+VA
Sbjct: 85 SFMLSLMIWMLMPYYFNLLSFNLGMLFFFCCTSLGVYMVMIAGWSSNSNYALLGGLRAVA 144
Query: 420 QTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNRTP 599
QTISYEV F YQ+ AETNRTP
Sbjct: 145 QTISYEVSLALIMMSCIIFIMDFNLLKFMDYQKLCWFMFIMIPLGLCWLSSSMAETNRTP 204
Query: 600 FDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILF 707
FDFAEGE ELVSGFNIEY GGFALIFLAEYSSILF
Sbjct: 205 FDFAEGESELVSGFNIEYSSGGFALIFLAEYSSILF 240
>UniRef50_P18929 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=1786; cellular organisms|Rep: NADH-ubiquinone
oxidoreductase chain 1 - Drosophila melanogaster (Fruit
fly)
Length = 312
Score = 259 bits (635), Expect = 4e-68
Identities = 129/216 (59%), Positives = 143/216 (66%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
AFLTLLERKVLGYIQIRKGPNKVG +G+ QPF DAIKLFTKE+TYP SNY YY SP+F
Sbjct: 22 AFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYLSYYISPIF 81
Query: 240 RFIXXXXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVA 419
+P+ L FNLG LFFLC TSLGVY V++AGWSSNSNYALLGGLR+VA
Sbjct: 82 SLFLSLFVWMCMPFFVKLYSFNLGGLFFLCCTSLGVYTVMVAGWSSNSNYALLGGLRAVA 141
Query: 420 QTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNRTP 599
QTISYEV +F+ YQ AETNR P
Sbjct: 142 QTISYEVSLALILLSFIFLIGSYNMIYFFFYQVYMWFLIILFPMALVWVSISLAETNRNP 201
Query: 600 FDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILF 707
FDFAEGE ELVSGFN+EY GG ALIF+AEY+SILF
Sbjct: 202 FDFAEGESELVSGFNVEYSSGGLALIFMAEYASILF 237
>UniRef50_P92111 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=40; Deltocephalinae|Rep: NADH-ubiquinone
oxidoreductase chain 1 - Flexamia delongi
Length = 310
Score = 213 bits (519), Expect = 5e-54
Identities = 107/215 (49%), Positives = 131/215 (60%)
Frame = +3
Query: 63 FLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFR 242
F TLLERKVL YIQ RKGPNK+G +GLLQPFSD +KLF KE+ +P SN Y PVF
Sbjct: 19 FFTLLERKVLSYIQCRKGPNKLGVLGLLQPFSDGMKLFMKEQFFPMNSNSMIYMVCPVFS 78
Query: 243 FIXXXXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVAQ 422
I PY N + LG LFFLC +SLG+Y ++I GWSSNS Y++LG +RS++Q
Sbjct: 79 MIQSLFIWVIFPYYVNCLEMGLGFLFFLCCSSLGIYGLMICGWSSNSVYSMLGCIRSISQ 138
Query: 423 TISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNRTPF 602
ISYEV +Y +Q AE+NRTPF
Sbjct: 139 AISYEVSLSLILLCFFLLVDSYSFISYYNFQFSLWLIMLSLPIFFRWLSCCMAESNRTPF 198
Query: 603 DFAEGERELVSGFNIEYRRGGFALIFLAEYSSILF 707
DF+EGE ELVSGFN+EY GGFAL+F++EYSSI+F
Sbjct: 199 DFSEGESELVSGFNVEYGGGGFALLFISEYSSIIF 233
>UniRef50_Q68RL2 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=8; Arthropoda|Rep: NADH-ubiquinone oxidoreductase
chain 1 - Glycaspis brimblecombei
Length = 306
Score = 200 bits (488), Expect = 3e-50
Identities = 102/216 (47%), Positives = 128/216 (59%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
AFLTLLERK+LGY+Q+RKGP+ VG G+ QPFSDA+KLF+KE N+F ++ SPVF
Sbjct: 20 AFLTLLERKLLGYVQLRKGPDSVGLWGVFQPFSDALKLFSKEYIIVQKINFFPFWLSPVF 79
Query: 240 RFIXXXXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVA 419
PY + L + L +LF C+ SL VY ++I+GWSSNS+YA LG +RSVA
Sbjct: 80 SLFVSLAVWFTFPYFYILCSWKLSVLFMFCVLSLNVYSIMISGWSSNSSYATLGCIRSVA 139
Query: 420 QTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNRTP 599
Q++SYEV F+ QE AE NRTP
Sbjct: 140 QSVSYEVSFFIMILTVIFFVGSFNLLEFFKTQEYSWIGCFTVPMFFMMFVSMLAELNRTP 199
Query: 600 FDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILF 707
FDF+EGE ELVSGFNIEY FA +FL+EY SI+F
Sbjct: 200 FDFSEGESELVSGFNIEYGGTSFAFLFLSEYLSIIF 235
>UniRef50_Q37546 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=112; Protostomia|Rep: NADH-ubiquinone oxidoreductase
chain 1 - Lumbricus terrestris (Common earthworm)
Length = 308
Score = 196 bits (477), Expect = 6e-49
Identities = 103/215 (47%), Positives = 123/215 (57%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
AF TL+ERK LGY +RKGPNKVG +GL QPF+DAIKLF KE+ PN SN + F+P
Sbjct: 21 AFYTLMERKFLGYFHLRKGPNKVGLMGLPQPFADAIKLFVKEQAKPNPSNQTPFLFAPTM 80
Query: 240 RFIXXXXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVA 419
+ P+ +L+FLC++S+ VY +AGWSSNS YALLG LR VA
Sbjct: 81 GLVLALLMWVIYPHSHQSFFIQFSVLYFLCVSSMNVYTTFLAGWSSNSKYALLGALRGVA 140
Query: 420 QTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNRTP 599
QTISYEV + Y AETNRTP
Sbjct: 141 QTISYEVSMSLILLSSLIILSTMDFTKMFSYS---WILFMFIPLAVVWFITNLAETNRTP 197
Query: 600 FDFAEGERELVSGFNIEYRRGGFALIFLAEYSSIL 704
FDFAEGE ELVSGFN+EY G FALIF+AEY++IL
Sbjct: 198 FDFAEGESELVSGFNVEYSAGLFALIFMAEYANIL 232
>UniRef50_Q8HET7 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=24; Formica|Rep: NADH-ubiquinone oxidoreductase chain
1 - Formica truncorum
Length = 293
Score = 195 bits (475), Expect = 1e-48
Identities = 103/216 (47%), Positives = 121/216 (56%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
AFLTLLERK+LGY+Q+RKGPNKV IG+ QPFSDAIKLF KE Y SNY +Y PV
Sbjct: 2 AFLTLLERKILGYVQMRKGPNKVMIIGMFQPFSDAIKLFNKELFYVYKSNYNLFYLCPVL 61
Query: 240 RFIXXXXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVA 419
F PYI N+ N +L + L S+ Y +I GWSSNS Y+++G +RSV+
Sbjct: 62 MFSVMLMSWMLFPYITNIYFLNYSMLLLILLMSISGYTMIFMGWSSNSIYSMMGSMRSVS 121
Query: 420 QTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNRTP 599
Q +SYEV F YQ AE NR+P
Sbjct: 122 QMLSYEVSFIFIIFILMIMSESYSFLDFMNYQIYVWYLFIFYPLFLMYFISVLAELNRSP 181
Query: 600 FDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILF 707
DF EGE ELVSGFNIEY GGF LIFLAEY I+F
Sbjct: 182 MDFIEGESELVSGFNIEYFSGGFTLIFLAEYGMIIF 217
>UniRef50_Q6JT33 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=12; Araneae|Rep: NADH-ubiquinone oxidoreductase chain
1 - Heptathela hangzhouensis
Length = 304
Score = 195 bits (475), Expect = 1e-48
Identities = 98/215 (45%), Positives = 123/215 (57%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
AF TL+ERKVLGYIQ RKGPNKVG +G+ QPFSDA+KLF KE + SN +Y PV
Sbjct: 16 AFFTLMERKVLGYIQCRKGPNKVGVLGIFQPFSDAVKLFGKEFYFLETSNMIYFYLGPVL 75
Query: 240 RFIXXXXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVA 419
+PY ++ GILFF + +G++ +++ GW SNS ++LLG R VA
Sbjct: 76 MIPLSLLLWILLPYSDGVLDLKYGILFFFICSGMGIFSLMLVGWGSNSKFSLLGSYRGVA 135
Query: 420 QTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNRTP 599
Q ISYEV +YQE AE NRTP
Sbjct: 136 QMISYEVSFMFIILGLLMISNSYLLIDILIYQEILWFFLGNLILLTMWLIVCMAELNRTP 195
Query: 600 FDFAEGERELVSGFNIEYRRGGFALIFLAEYSSIL 704
FDFAEGE ELVSGFN+E+ GGFA+IF++EYSSI+
Sbjct: 196 FDFAEGESELVSGFNVEFMGGGFAIIFMSEYSSIM 230
>UniRef50_P03886 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=3058; root|Rep: NADH-ubiquinone oxidoreductase chain 1
- Homo sapiens (Human)
Length = 318
Score = 191 bits (465), Expect = 2e-47
Identities = 103/215 (47%), Positives = 123/215 (57%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
AFL L ERK+LGY+Q+RKGPN VG GLLQPF+DA+KLFTKE P S Y +P
Sbjct: 18 AFLMLTERKILGYMQLRKGPNVVGPYGLLQPFADAMKLFTKEPLKPATSTITLYITAPTL 77
Query: 240 RFIXXXXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVA 419
+P L+ NLG+LF L +SL VY ++ +GW+SNSNYAL+G LR+VA
Sbjct: 78 ALTIALLLWTPLPMPNPLVNLNLGLLFILATSSLAVYSILWSGWASNSNYALIGALRAVA 137
Query: 420 QTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNRTP 599
QTISYEV QE AETNRTP
Sbjct: 138 QTISYEVTLAIILLSTLLMSGSFNLSTLITTQEHLWLLLPSWPLAMMWFISTLAETNRTP 197
Query: 600 FDFAEGERELVSGFNIEYRRGGFALIFLAEYSSIL 704
FD AEGE ELVSGFNIEY G FAL F+AEY++I+
Sbjct: 198 FDLAEGESELVSGFNIEYAAGPFALFFMAEYTNII 232
>UniRef50_Q8HQJ2 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=7; Chelicerata|Rep: NADH-ubiquinone oxidoreductase
chain 1 - Ornithodoros moubata (Soft tick)
Length = 324
Score = 187 bits (456), Expect = 2e-46
Identities = 94/216 (43%), Positives = 121/216 (56%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
AF TLLERKVLGYI +RKGPN VG IG+ QPF+DA+KLF KE + F N + Y + V
Sbjct: 17 AFFTLLERKVLGYIHLRKGPNSVGIIGMFQPFADAVKLFCKEMNFMKFMNIYMYMWISVI 76
Query: 240 RFIXXXXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVA 419
I + N + G+++FLC++SLGVY+++ GW+SNS Y LLG R +A
Sbjct: 77 SLILMMMGWILYYWGKNQVEIEYGLIYFLCVSSLGVYVILGGGWASNSKYGLLGSFRGLA 136
Query: 420 QTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNRTP 599
Q ISYEV +QE AE NR+P
Sbjct: 137 QVISYEVGMSFVLMGIIYFSGSYNIMVVSEFQEKFWMVWGMTGLFFLWMISSFAEVNRSP 196
Query: 600 FDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILF 707
FD EGE ELVSGFN+EY GFAL+F++EY +I+F
Sbjct: 197 FDLCEGESELVSGFNVEYGSYGFALLFISEYGNIIF 232
>UniRef50_Q8HQ04 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=7; Arthropoda|Rep: NADH-ubiquinone oxidoreductase
chain 1 - Thrips imaginis (Plague thrips)
Length = 306
Score = 187 bits (456), Expect = 2e-46
Identities = 97/215 (45%), Positives = 125/215 (58%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
AF+TL+ERK+LGY+QIR GPNKVG G+LQP +DA+KL++KE +P SN ++ SP
Sbjct: 21 AFITLMERKILGYMQIRMGPNKVGLTGILQPMADAVKLYSKEINWPTQSNSMPFFISPCL 80
Query: 240 RFIXXXXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVA 419
+PY+ I L +L FL + LGVY ++I+GWSSNSNY+L+G +R++A
Sbjct: 81 SLTLALTLCLIMPYLKPWINMKLSLLMFLAILGLGVYPILISGWSSNSNYSLIGSMRALA 140
Query: 420 QTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNRTP 599
QTISYEV Y Q+ AE NRTP
Sbjct: 141 QTISYEVSLVFILLSSLFISSSLSFYSLVETQK-LFYFFLFIVPFYMWLFSTVAELNRTP 199
Query: 600 FDFAEGERELVSGFNIEYRRGGFALIFLAEYSSIL 704
FDFAEGE ELVSGFN E+ FA+IF+AEY IL
Sbjct: 200 FDFAEGESELVSGFNTEFSSSPFAIIFMAEYLMIL 234
>UniRef50_Q9MIZ0 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=284; Coelomata|Rep: NADH-ubiquinone oxidoreductase
chain 1 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 324
Score = 186 bits (454), Expect = 4e-46
Identities = 99/215 (46%), Positives = 125/215 (58%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
AFLTL+ERKVLGY+Q+RKGPN +G GLLQ +D +KLF KE P+ ++ + +PV
Sbjct: 24 AFLTLVERKVLGYMQLRKGPNVMGPRGLLQSVADGVKLFIKEPIRPSMASPILFLTAPVL 83
Query: 240 RFIXXXXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVA 419
I +P + ++ NLGILF + ++SL VY ++ +GW+SNS YAL+G LR+VA
Sbjct: 84 ALILAMMLWAPMPMPYPVLDLNLGILFIMAISSLAVYSILGSGWASNSKYALIGALRAVA 143
Query: 420 QTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNRTP 599
QTISYEV F QE AETNR P
Sbjct: 144 QTISYEVSLGLILLSAVIFSGGYTLQTFNTTQEDTWLLLPLWPLAIMWFISTLAETNRAP 203
Query: 600 FDFAEGERELVSGFNIEYRRGGFALIFLAEYSSIL 704
FD EGE ELVSGFN+EY G FAL FLAEYS+IL
Sbjct: 204 FDLTEGESELVSGFNVEYAAGPFALFFLAEYSNIL 238
>UniRef50_Q6JCT2 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=14; Aleyrodidae|Rep: NADH-ubiquinone oxidoreductase
chain 1 - Aleurodicus dispersus
Length = 318
Score = 186 bits (452), Expect = 6e-46
Identities = 94/215 (43%), Positives = 122/215 (56%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
AF TL+ERK+L Y+Q RKGPNK +G+LQPFSDAIKLF+KE SNY YY P+
Sbjct: 19 AFFTLMERKILSYMQNRKGPNKTLIMGILQPFSDAIKLFSKEMNLNFKSNYIIYYMFPLL 78
Query: 240 RFIXXXXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVA 419
I P+ +N IL + + S+ + I+++ WSSNSNYA++G +RS+A
Sbjct: 79 NIICSLMMWMIYPFYWNFNFNKFNILMLMSMMSINMIIIMLISWSSNSNYAMIGLMRSIA 138
Query: 420 QTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNRTP 599
Q ISYE+ + ++ Q+ AETNRTP
Sbjct: 139 QMISYEINLMIIIMTIVNLTEQLNFNYMFIMQKYMMFYLYLMFLFYIWIITILAETNRTP 198
Query: 600 FDFAEGERELVSGFNIEYRRGGFALIFLAEYSSIL 704
FDF+EGE EL+SGFNIEY FA IFLAEYS+IL
Sbjct: 199 FDFSEGESELISGFNIEYSSFSFAFIFLAEYSNIL 233
>UniRef50_Q0QJ87 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=1; Xenos vesparum|Rep: NADH-ubiquinone oxidoreductase
chain 1 - Xenos vesparum
Length = 318
Score = 184 bits (447), Expect = 3e-45
Identities = 99/216 (45%), Positives = 118/216 (54%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
AF+ L ERK+LGYI IRK NKVGFIGL+QP D IKL KE + SN + +P+
Sbjct: 30 AFIVLYERKILGYIHIRKSVNKVGFIGLIQPLGDGIKLLFKESSLLEKSNILLFLMAPLM 89
Query: 240 RFIXXXXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVA 419
F +PY N+ FNL ILFFL L S+ V +I+ GWSSNS+Y+ L LR V
Sbjct: 90 NFFLVMLMYMVLPYSGNMDWFNLSILFFLVLLSMNVLSIILIGWSSNSSYSFLSALRMVV 149
Query: 420 QTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNRTP 599
Q ISYE+ + Q+ AE+NR P
Sbjct: 150 QMISYEISLMFLLLSIMVSVESFSVLNLEMVQKYLWLVSCYMLLSVMIFVIFLAESNRVP 209
Query: 600 FDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILF 707
FDF EGE ELVSGFNIEY G FALIF+AEY SILF
Sbjct: 210 FDFIEGESELVSGFNIEYGSGYFALIFVAEYLSILF 245
>UniRef50_Q68RK6 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=51; Bilateria|Rep: NADH-ubiquinone oxidoreductase
chain 1 - Diuraphis noxia (Russian wheat aphid)
Length = 315
Score = 183 bits (446), Expect = 3e-45
Identities = 94/216 (43%), Positives = 119/216 (55%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
AF TLLERKVLGYIQ+RKGPNK G LQP D +KLF KE YP+ N+F + SP+
Sbjct: 26 AFFTLLERKVLGYIQLRKGPNKFFLKGALQPMGDGLKLFFKEVNYPSNMNFFIFMISPML 85
Query: 240 RFIXXXXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVA 419
+ PYI G+++ C +SL VYI ++ WSSNSNY++LG +R ++
Sbjct: 86 GLLISIFFWFIYPYIGMNYIMGFGLIYMFCCSSLMVYIFLMVSWSSNSNYSVLGMIRFIS 145
Query: 420 QTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNRTP 599
Q ISYEV FY+YQ AE NR+P
Sbjct: 146 QMISYEVSMMIIIMNLMFLINSFNLNDFYIYQMNSKFFFFLFLIFILLLISFMAEMNRSP 205
Query: 600 FDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILF 707
FDF+EGE ELVSGFNIE+ F IF++EY SI+F
Sbjct: 206 FDFSEGESELVSGFNIEFSSMSFIFIFMSEYMSIMF 241
>UniRef50_P48899 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=144; Eukaryota|Rep: NADH-ubiquinone oxidoreductase
chain 1 - Cyanidium caldarium
Length = 344
Score = 182 bits (442), Expect = 1e-44
Identities = 98/219 (44%), Positives = 125/219 (57%), Gaps = 4/219 (1%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
A+LTL+ERK++G IQ RKGPN VG GLLQP +D +KL KE + PN +N F + +P+
Sbjct: 39 AYLTLIERKIIGSIQKRKGPNIVGIFGLLQPIADGLKLLLKETSLPNSANIFIFIIAPIL 98
Query: 240 RFIXXXXXXXXIPYIFNLICF----NLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGL 407
F +P FN I F N+GIL+ L ++SLGVY +II+GW+SNS YA LGGL
Sbjct: 99 TFFLALCAWAIMP--FNEINFYSNLNIGILYLLAISSLGVYGIIISGWASNSKYAFLGGL 156
Query: 408 RSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAET 587
RS AQ ISYEV L Q+ AET
Sbjct: 157 RSAAQIISYEVSIGLIIINVLLCSGTLNLKEIVLAQQNIWYIFPLFPLFLMFFISSLAET 216
Query: 588 NRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSIL 704
NR+PFD E E ELV+G+N+EY GFAL FL EY++I+
Sbjct: 217 NRSPFDLPEAEAELVAGYNVEYSAMGFALFFLGEYTNII 255
>UniRef50_P48897 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=20; Sigmurethra|Rep: NADH-ubiquinone oxidoreductase
chain 1 - Albinaria coerulea (Land snail)
Length = 299
Score = 180 bits (437), Expect = 4e-44
Identities = 101/216 (46%), Positives = 121/216 (56%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
AF TLLERKVL +QIRKGPNKVG G++QP +DA+KLF KE P SN F + P+
Sbjct: 18 AFYTLLERKVLSSMQIRKGPNKVGLYGIIQPIADALKLFLKEFFIPVNSNSFMFMILPLL 77
Query: 240 RFIXXXXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVA 419
P ++ + ++ F+ LT VY++I AGWSSNS Y+ LGG+R+ A
Sbjct: 78 GLTLSLMLWAVFPSMWMFNFHSYLLMLFVALTGTFVYVIIFAGWSSNSKYSFLGGMRAAA 137
Query: 420 QTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNRTP 599
QTISYEV Y +Y AETNR P
Sbjct: 138 QTISYEV---SMLLLLFFAVLMYRTYSWYEAGLSSPIGIIIFIIMFIWFASCLAETNRAP 194
Query: 600 FDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILF 707
FDFAEGE ELVSGFNIEY G FAL+FLAEYSSILF
Sbjct: 195 FDFAEGESELVSGFNIEYYGGMFALLFLAEYSSILF 230
>UniRef50_Q766W0 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=3; Crustacea|Rep: NADH-ubiquinone oxidoreductase chain
1 - Vargula hilgendorfii (Sea firefly) (Cypridina
hilgendorfii)
Length = 318
Score = 179 bits (435), Expect = 7e-44
Identities = 96/215 (44%), Positives = 120/215 (55%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
AF TLLERK+LGY +RKGPNKVG+IG+LQPF+DA+KLFTKE P S+ Y SPV
Sbjct: 33 AFFTLLERKILGYAGMRKGPNKVGYIGILQPFADAVKLFTKEDVVPMKSSVMLYMISPVL 92
Query: 240 RFIXXXXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVA 419
PY F + F+ G L+ C +GVY + ++GWSSNS YA++G LR+VA
Sbjct: 93 ALFMPLCMWCVFPYWFVGVEFSWGWLYVFCGLGMGVYSLFLSGWSSNSKYAVMGSLRAVA 152
Query: 420 QTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNRTP 599
Q ISYEV Y L+ E+ R+P
Sbjct: 153 QMISYEV---VLAMVVMLFVFFLGSYDMGLWGYTSLLGVGLLPLLWIWMTVMLGESQRSP 209
Query: 600 FDFAEGERELVSGFNIEYRRGGFALIFLAEYSSIL 704
FD AEGE ELVSGFN EY GFAL+F+ EY ++L
Sbjct: 210 FDLAEGESELVSGFNTEYSGVGFALLFMGEYGAML 244
>UniRef50_Q4L1B9 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=1; Lepeophtheirus salmonis|Rep: NADH-ubiquinone
oxidoreductase chain 1 - Lepeophtheirus salmonis (salmon
louse)
Length = 295
Score = 179 bits (435), Expect = 7e-44
Identities = 98/215 (45%), Positives = 121/215 (56%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
AF+TLLERK++GY Q RKGPNKV F+G+LQPFSDAIKLF KE +F NY Y+ SPV
Sbjct: 11 AFITLLERKIIGYSQARKGPNKVSFLGILQPFSDAIKLFVKEVGSFSFVNYSVYWISPVV 70
Query: 240 RFIXXXXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVA 419
P + +++ L L S+ VY + ++GWSSN Y+ +GG+R VA
Sbjct: 71 GLSVALLIWNVYPLEMSFGSWSISWLGLLAGMSVSVYPLFLSGWSSNCVYSHIGGVRGVA 130
Query: 420 QTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNRTP 599
Q ISYEV L+ E AETNRTP
Sbjct: 131 QVISYEVVFTILVFSLMSLSGSLTLVGSMLFSEYFYVYMLSPLLVYLWFLTGLAETNRTP 190
Query: 600 FDFAEGERELVSGFNIEYRRGGFALIFLAEYSSIL 704
FDF+EGE ELVSGFN EY GFALIF+A+Y+SIL
Sbjct: 191 FDFSEGESELVSGFNTEYGGSGFALIFMAQYASIL 225
>UniRef50_O99824 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=17; Bilateria|Rep: NADH-ubiquinone oxidoreductase
chain 1 - Rhipicephalus sanguineus (Brown dog tick)
Length = 313
Score = 177 bits (431), Expect = 2e-43
Identities = 93/215 (43%), Positives = 115/215 (53%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
AF TL+ERK LGY IRKGPNK G +GLLQP SDA+KLF+KE + N F SP+
Sbjct: 20 AFFTLMERKFLGYCHIRKGPNKTGAMGLLQPISDALKLFSKEMNKMFYMNKFIQIISPLI 79
Query: 240 RFIXXXXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVA 419
+ + N + N+ I+FFLC++SL Y ++ +GWSSNS Y+L+G R A
Sbjct: 80 MILMMMMMWMIFYFSNNALNLNMSIIFFLCISSLASYAILFSGWSSNSKYSLIGSYRGFA 139
Query: 420 QTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNRTP 599
Q ISYEV F QE AE NR P
Sbjct: 140 QVISYEVSMAMILISLAIIPQSYNFISFLKIQETFPLIFSFLPIFIIWIITVLAELNRVP 199
Query: 600 FDFAEGERELVSGFNIEYRRGGFALIFLAEYSSIL 704
FD AEGE ELVSGFNIEY FA+IF++EY I+
Sbjct: 200 FDLAEGESELVSGFNIEYGSWLFAIIFMSEYGDIM 234
>UniRef50_Q96186 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=4; Pectinidae|Rep: NADH-ubiquinone oxidoreductase
chain 1 - Pecten maximus (King scallop) (Pilgrim's clam)
Length = 354
Score = 177 bits (430), Expect = 3e-43
Identities = 95/217 (43%), Positives = 123/217 (56%), Gaps = 1/217 (0%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
A+LTL ERKVL Q+RKGP VG++G++QPF+D IKLF+KE P+ SN ++ P F
Sbjct: 58 AYLTLFERKVLAASQVRKGPEMVGWLGIMQPFADGIKLFSKEYFTPSNSNPALFFLGPCF 117
Query: 240 RFIXXXXXXXXIPYIFNL-ICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSV 416
+ P I+ + F G L+ L + S+GVY V++ GWSSNS YA+ G +R++
Sbjct: 118 MLLHSFILWGCSPGIWGCGVYFFWGGLYVLSVLSVGVYGVVLCGWSSNSRYAMFGAVRAL 177
Query: 417 AQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNRT 596
AQ ISYEV L Q AE+NR
Sbjct: 178 AQVISYEVMLVFLYLCPFFVVGSLDLESVSLSQVSGCNGGVLFLVLPWWVFCVLAESNRA 237
Query: 597 PFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILF 707
PFDF EGE ELVSGFN+EY GGFA+IF+AEYS+ILF
Sbjct: 238 PFDFVEGESELVSGFNVEYGSGGFAMIFIAEYSNILF 274
>UniRef50_Q6E0W1 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=1; Paraspadella gotoi|Rep: NADH-ubiquinone
oxidoreductase chain 1 - Paraspadella gotoi
Length = 297
Score = 176 bits (429), Expect = 4e-43
Identities = 96/216 (44%), Positives = 119/216 (55%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
AF TL+ERK+L IQ+R GPNK ++GLL PF+DA+KL TKE P SN Y P+F
Sbjct: 25 AFFTLMERKILSLIQLRVGPNKPSYMGLLVPFADALKLITKENNIPQGSNKLLYLLLPLF 84
Query: 240 RFIXXXXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVA 419
+ P + + G+LFFLCL+SLGVY ++ GWSSNS Y+L+G +RSVA
Sbjct: 85 TLMIPLNMWVLNPSNMSSLTTKSGLLFFLCLSSLGVYAIMFLGWSSNSKYSLMGAIRSVA 144
Query: 420 QTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNRTP 599
QTISYEV + L AE+NR P
Sbjct: 145 QTISYEVTMAIIIIHHVIIN------MYMLKNLGVTPTNFFIIIMVMMMISMLAESNRAP 198
Query: 600 FDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILF 707
FDFAEGE ELVSGFN E+ F LIFLAEY+ + F
Sbjct: 199 FDFAEGESELVSGFNTEFSSIPFVLIFLAEYTMMFF 234
>UniRef50_P34847 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=5; Endopterygota|Rep: NADH-ubiquinone oxidoreductase
chain 1 - Apis mellifera ligustica (Common honeybee)
Length = 305
Score = 174 bits (423), Expect = 2e-42
Identities = 93/216 (43%), Positives = 115/216 (53%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
AFLTLLERK+LGYIQ RKGPNK+ G+ QPFSDA+KL +KE + N+SN F Y SP+
Sbjct: 19 AFLTLLERKILGYIQDRKGPNKIMLFGMFQPFSDALKLLSKEWFFFNYSNLFIY--SPML 76
Query: 240 RFIXXXXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVA 419
F P+ + ILF L + L VY V+ GW SN NYA+LG +R V+
Sbjct: 77 MFFLSLVMWILYPWFGFMYYIEFSILFMLLVLGLSVYPVLFVGWISNCNYAILGSMRLVS 136
Query: 420 QTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNRTP 599
IS+E+ F+ +Q E NRTP
Sbjct: 137 TMISFEINLFFLVFSLMMMVESFSFNEFFFFQNNIKFAILLYPLYLMMFTSMLIELNRTP 196
Query: 600 FDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILF 707
FD EGE ELVSGFNIEY F LIFL+EY +I+F
Sbjct: 197 FDLIEGESELVSGFNIEYHSSMFVLIFLSEYMNIMF 232
>UniRef50_Q94QP9 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=1; Inversidens japanensis|Rep: NADH-ubiquinone
oxidoreductase chain 1 - Inversidens japanensis
Length = 292
Score = 173 bits (421), Expect = 4e-42
Identities = 90/216 (41%), Positives = 120/216 (55%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
AFLTLLERK LGY+Q+RKGPNK+G GL QP +DA+KL TK + P N +P+
Sbjct: 13 AFLTLLERKSLGYMQLRKGPNKLGLTGLPQPLADAMKLLTKTTSTPTICNPIAMSVAPLL 72
Query: 240 RFIXXXXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVA 419
P ++ +LG+L F+C+++ VY +++ GWS+NS +ALLG +R++A
Sbjct: 73 ALALSALLWHLYPTTHSVSHKSLGLLLFICISATAVYSIMVGGWSTNSKFALLGAMRAMA 132
Query: 420 QTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNRTP 599
QTISYE+ F AETNR P
Sbjct: 133 QTISYEIPMILTLIFYGLISNTLDLSAFCENLSLKFKGLLIIPMTLVWLTIMLAETNRAP 192
Query: 600 FDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILF 707
FDFAEGE ELVSGFN+EY FA++F+AEY +ILF
Sbjct: 193 FDFAEGESELVSGFNVEYSGTKFAMLFMAEYLNILF 228
>UniRef50_P92558 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=365; Eukaryota|Rep: NADH-ubiquinone oxidoreductase
chain 1 - Arabidopsis thaliana (Mouse-ear cress)
Length = 325
Score = 173 bits (420), Expect = 5e-42
Identities = 88/217 (40%), Positives = 121/217 (55%), Gaps = 2/217 (0%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
AFL L ERKV+ ++Q RKGP+ VG GLLQP +D +KL KE P+ +N+F + +PV
Sbjct: 21 AFLVLAERKVMAFVQRRKGPDVVGSFGLLQPLADGLKLILKEPISPSSANFFLFRMAPVA 80
Query: 240 RFIXXXXXXXXIPYIFNLIC--FNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRS 413
F+ +P+ + ++ N+G+L+ ++SLGVY +IIAGWSSNS YA LG LRS
Sbjct: 81 TFMLSLVAWAVVPFDYGMVLSDLNIGLLYLFAISSLGVYGIIIAGWSSNSKYAFLGALRS 140
Query: 414 VAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNR 593
AQ +SYEV + Q+ AETNR
Sbjct: 141 AAQMVSYEVSIGLILITVLICVGSCNLSEIVMAQKQIWFGIPLFPVLVMFFISCLAETNR 200
Query: 594 TPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSIL 704
PFD E E ELV+G+N+EY GFAL FL EY++++
Sbjct: 201 APFDLPEAEAELVAGYNVEYSSMGFALFFLGEYANMI 237
>UniRef50_Q1W1N4 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=675; Arachnida|Rep: NADH-ubiquinone oxidoreductase
chain 1 - Pardosa hyperborea
Length = 306
Score = 170 bits (414), Expect = 3e-41
Identities = 97/216 (44%), Positives = 116/216 (53%), Gaps = 1/216 (0%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
AF TLLERK+L YIQIRKGPNKVG +G+LQPFSDAIKLF K N+ + +P
Sbjct: 19 AFYTLLERKILSYIQIRKGPNKVGMMGILQPFSDAIKLFNKNLLPLESMNFTLSFMTPFM 78
Query: 240 RFIXXXXXXXXIPY-IFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSV 416
+ Y LI +L F L+S+ VY +++ GWS+NS Y LG +RSV
Sbjct: 79 SLFISLCMISILMYNDSTLIDIKHSLLMFFILSSMSVYFILLIGWSTNSKYCHLGSIRSV 138
Query: 417 AQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNRT 596
AQ ISYEV Q AETNR+
Sbjct: 139 AQMISYEVPFFMMILFLVLLSQSYSFTQMEETQYLLYYFWGNMLLFMMWLSSCLAETNRS 198
Query: 597 PFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSIL 704
PFDFAEGE ELVSGFN+EY G FALIFL+EY S+L
Sbjct: 199 PFDFAEGESELVSGFNVEYMGGLFALIFLSEYLSML 234
>UniRef50_Q00860 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=6; Mytilus|Rep: NADH-ubiquinone oxidoreductase chain 1
- Mytilus edulis (Blue mussel)
Length = 305
Score = 169 bits (412), Expect = 4e-41
Identities = 89/215 (41%), Positives = 122/215 (56%), Gaps = 1/215 (0%)
Frame = +3
Query: 63 FLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFR 242
F TLLERK+L I IRKGP+KV ++G+LQPFSDA KL KE P +N + +P
Sbjct: 22 FYTLLERKILAIIMIRKGPSKVSYMGILQPFSDAGKLLCKEFIVPTRANVGPFILAPALM 81
Query: 243 FIXXXXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVAQ 422
PY + + G++ F+ +TS+ VY V+++GW+SNS Y+LLG +R++AQ
Sbjct: 82 LAISLLGWLLYPYKSAEVFYVFGVILFMVITSVSVYGVMMSGWASNSKYSLLGAVRAMAQ 141
Query: 423 TISYEVRXXXXXXXXXXXXXXXXXYFFYLYQE-XXXXXXXXXXXXXXXXXXXXAETNRTP 599
+ISYE+ ++Q+ AETNR P
Sbjct: 142 SISYEIPMGFIFFCVVLCSGVFMFQEISVFQQSLFFFFLPLCVVMLVWMLCMLAETNRAP 201
Query: 600 FDFAEGERELVSGFNIEYRRGGFALIFLAEYSSIL 704
FDF EGE ELVSG+N+EY GGFA++F+AEYSSIL
Sbjct: 202 FDFVEGESELVSGYNVEYSGGGFAVMFIAEYSSIL 236
>UniRef50_Q8M6U9 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=15; Bilateria|Rep: NADH-ubiquinone oxidoreductase
chain 1 - Tigriopus japonicus
Length = 306
Score = 163 bits (396), Expect = 4e-39
Identities = 89/216 (41%), Positives = 117/216 (54%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
AF+TL ERK+LG Q+RKGPNKV G+LQP +DA+KLF KE P SN+F + +P
Sbjct: 20 AFVTLFERKILGCAQLRKGPNKVSLGGVLQPLADAVKLFFKETVVPCESNFFMFISAPAS 79
Query: 240 RFIXXXXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVA 419
F+ + + ++F LC+ +GVY + IAGWSSNS YAL+G LR +A
Sbjct: 80 GFMVFSLCSSALHASSDSGYVEYVMVFVLCVLGMGVYPLFIAGWSSNSKYALIGSLRGIA 139
Query: 420 QTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNRTP 599
Q+ISYE+ + AE+NRTP
Sbjct: 140 QSISYEISLSLIVLSMMLLWQSFSIESAADFLPSPGLTVFLFPLLSLWLISCLAESNRTP 199
Query: 600 FDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILF 707
FDFAEGE ELVSGFN+E+ F L+F++EY ILF
Sbjct: 200 FDFAEGESELVSGFNVEFGGIFFVLMFMSEYGMILF 235
>UniRef50_Q64LH8 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=1; Paratomella rubra|Rep: NADH-ubiquinone
oxidoreductase chain 1 - Paratomella rubra
Length = 313
Score = 163 bits (395), Expect = 5e-39
Identities = 93/215 (43%), Positives = 112/215 (52%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
AF TLLERK+L Y Q+RKGPN VG G LQP +D +KLF KE P S F YY SP+F
Sbjct: 24 AFFTLLERKLLSYSQLRKGPNVVGS-GFLQPIADGLKLFIKEVVVPLSSQNFLYYLSPLF 82
Query: 240 RFIXXXXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVA 419
F + +N FFL ++S V+ + +GWSSNS +A+LG +R+ A
Sbjct: 83 VFFLSLFLWSIFFFSKLFFVYN-SFFFFLSVSSXSVFFFLSSGWSSNSFFAILGSIRAAA 141
Query: 420 QTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNRTP 599
Q ISYEV YF + AETNR+P
Sbjct: 142 QMISYEVVMSFILVFFFLLXKTNSFYFIMDFSLYFENLLFFFFFFFFWMVVILAETNRSP 201
Query: 600 FDFAEGERELVSGFNIEYRRGGFALIFLAEYSSIL 704
FD EGE ELVSGFN+EY G FA FLAEY IL
Sbjct: 202 FDLTEGESELVSGFNVEYSAGPFAFFFLAEYGMIL 236
>UniRef50_Q9B8G7 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=1; Heterodoxus macropus|Rep: NADH-ubiquinone
oxidoreductase chain 1 - Heterodoxus macropus (wallaby
louse)
Length = 297
Score = 159 bits (386), Expect = 6e-38
Identities = 87/216 (40%), Positives = 116/216 (53%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
AF TLLERK+LGYI RKGPNKV G+LQP DA+KL TK+ + +SN F YY SP+F
Sbjct: 19 AFFTLLERKILGYIHFRKGPNKVLLKGVLQPIVDAMKLITKDDSPIIYSNIFLYYISPMF 78
Query: 240 RFIXXXXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVA 419
FI +P F + + L L +GVY + ++GWSSNS YA LG LR+V+
Sbjct: 79 SFIMSMIIWMILPLQFIIFNWVNSFLILFMLLGMGVYSMFLSGWSSNSKYAYLGSLRAVS 138
Query: 420 QTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNRTP 599
Q+ISYE+ Y+ + AE NR+P
Sbjct: 139 QSISYEILMSMLFIALMMTTKGMSIYYILKFD---PLVFFLFPFFIAYLFIGLAELNRSP 195
Query: 600 FDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILF 707
FD +EGE ELV+G+ +EY + +IFL+E I+F
Sbjct: 196 FDLSEGESELVAGYTVEYGGIMYTMIFLSENIMIMF 231
>UniRef50_Q37381 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=117; Eukaryota|Rep: NADH-ubiquinone oxidoreductase
chain 1 - Acanthamoeba castellanii (Amoeba)
Length = 369
Score = 157 bits (381), Expect = 2e-37
Identities = 88/217 (40%), Positives = 115/217 (52%), Gaps = 2/217 (0%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
AFLTL ERKVL IQ RKGPN GF+G+LQP +DA+KL KE P ++ ++ P+
Sbjct: 24 AFLTLFERKVLASIQKRKGPNWTGFLGILQPLADALKLILKENPVPQNASSVLFFGGPLI 83
Query: 240 RFIXXXXXXXXIPYIFNLIC--FNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRS 413
I IP+ + N+GIL+ ++SL +I+AGWSSNS YA LG LRS
Sbjct: 84 LLILSLSAWFVIPFNNETVVSDINIGILYVFMVSSLNTLNIIVAGWSSNSRYAFLGALRS 143
Query: 414 VAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNR 593
+AQ I+YEV Q+ AETNR
Sbjct: 144 IAQVIAYEVVIGIIIINIIVLSGSLNFLKIVWAQKDLWYAFVLWAQFFLFFIAMLAETNR 203
Query: 594 TPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSIL 704
PFD AE E ELVSG+N+E+ FAL FL+EY++I+
Sbjct: 204 HPFDLAEAESELVSGYNVEHSSVLFALFFLSEYANII 240
>UniRef50_Q06SB9 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=2; Heteroconchia|Rep: NADH-ubiquinone oxidoreductase
chain 1 - Hiatella arctica
Length = 314
Score = 156 bits (379), Expect = 4e-37
Identities = 85/216 (39%), Positives = 114/216 (52%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
AF ++ERK LG+ Q+R+GPNK G+ Q +D +KL K +P S + ++ P
Sbjct: 27 AFFIVVERKGLGHFQLRQGPNKPSIKGIAQALADGVKLMLKGCFFPGNSEKYLFFLGPFL 86
Query: 240 RFIXXXXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVA 419
F P + I + + +++CL +LGVY V I GWSSNS+YALLG +R++A
Sbjct: 87 MFSFSYGFWLIFPCYHSSIFYESSMAYYMCLVALGVYGVFICGWSSNSSYALLGAMRALA 146
Query: 420 QTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNRTP 599
Q+ISYEV F + + AETNR P
Sbjct: 147 QSISYEVVLGTLILCPCLYSGGLSVNSFLMTK--GLYGGLSVEIFFLWMAVLLAETNRAP 204
Query: 600 FDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILF 707
FDF EGE ELV+GFN+E+ GFALI LAEY SILF
Sbjct: 205 FDFVEGESELVAGFNVEFGGFGFALIALAEYGSILF 240
>UniRef50_Q15K54 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=1; Flustrellidra hispida|Rep: NADH-ubiquinone
oxidoreductase chain 1 - Flustrellidra hispida
Length = 283
Score = 155 bits (377), Expect = 8e-37
Identities = 93/216 (43%), Positives = 117/216 (54%), Gaps = 2/216 (0%)
Frame = +3
Query: 63 FLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFR 242
F TLLERK L Y+Q RKGPNK G G++QP SDAIKLFTKE+T +++ + PV
Sbjct: 16 FYTLLERKTLSYMQSRKGPNKPGLSGMVQPLSDAIKLFTKEKTNMFYTSTL-FALVPVL- 73
Query: 243 FIXXXXXXXXIPYIFNL--ICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSV 416
F+ Y NL + LG + +CL+SL VY + +GW+SNS YAL+G +R +
Sbjct: 74 FMSLIFTTWWF-YFCNLTSVYICLGAILLICLSSLSVYGIFFSGWTSNSKYALMGSMRGL 132
Query: 417 AQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNRT 596
AQTISYEV Y AETNRT
Sbjct: 133 AQTISYEV-----CMSILILIAILSLYTADFASMTLPVGLHNPLLLAMWTICIPAETNRT 187
Query: 597 PFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSIL 704
PFD AEGE ELVSGFN EY G F+ +F+AEY S++
Sbjct: 188 PFDHAEGESELVSGFNTEYSGGLFSFLFIAEYGSVI 223
>UniRef50_A7KCS7 Cluster: NADH dehydrogenase subunit 1; n=4;
Dikarya|Rep: NADH dehydrogenase subunit 1 - Pleurotus
ostreatus (Oyster mushroom) (White-rot fungus)
Length = 346
Score = 153 bits (372), Expect = 3e-36
Identities = 90/217 (41%), Positives = 114/217 (52%), Gaps = 2/217 (0%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
AF+T++ERK L Q R GPN VG+ GLLQPF+DA+KL KE P+ SN ++ +P+
Sbjct: 40 AFMTIIERKQLAAHQRRVGPNIVGYYGLLQPFADALKLILKETIIPSQSNKVLFFLAPIS 99
Query: 240 RFIXXXXXXXXIPYIFNLIC--FNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRS 413
I IP+ L F+LGIL+ L L+SLGVY V++AGWS+NS YA LG LRS
Sbjct: 100 TLIFSLLGWGIIPFGQGLALSDFSLGILYTLALSSLGVYGVLLAGWSANSKYAFLGSLRS 159
Query: 414 VAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNR 593
A ISYE+ Q+ AET+R
Sbjct: 160 TAAMISYELILSSAILIIILLTGSLNYNTIIEIQQSVWFIIPLLPVFIFYFIAILAETSR 219
Query: 594 TPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSIL 704
TPFD E E ELV+GF E+ F FL EYSSI+
Sbjct: 220 TPFDLQEAESELVAGFFTEHSSVPFVYFFLGEYSSIV 256
>UniRef50_Q3T4B4 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=2; Fungi|Rep: NADH-ubiquinone oxidoreductase chain 1 -
Smittium culisetae (Gut fungus)
Length = 323
Score = 153 bits (371), Expect = 4e-36
Identities = 86/217 (39%), Positives = 112/217 (51%), Gaps = 2/217 (0%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
AFLTL ERKV+G +Q R GPNKVG G+LQP +D IKL KE P SN +P+
Sbjct: 20 AFLTLTERKVMGSMQRRVGPNKVGIFGILQPIADGIKLLLKETIIPYQSNKLLLILAPLL 79
Query: 240 RFIXXXXXXXXIPYI--FNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRS 413
F IP+ + + LGI++ L ++S+GV +I+AGWS NS Y+L+G LR+
Sbjct: 80 IFTINLIGWAPIPFSKGYQISDMELGIIYILAISSIGVVGIILAGWSGNSKYSLMGCLRT 139
Query: 414 VAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNR 593
AQ +SYE+ L+Q+ AETNR
Sbjct: 140 TAQLVSYELLLGLTILTVILIINNFNINNIILFQQSIYFFIPLLPLFIIIFISAIAETNR 199
Query: 594 TPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSIL 704
PFD E E ELVSG EY FALIFL EY +++
Sbjct: 200 PPFDLVESESELVSGAFTEYSSFSFALIFLGEYGAMI 236
>UniRef50_Q85UH6 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=9; Urochordata|Rep: NADH-ubiquinone oxidoreductase
chain 1 - Ciona savignyi (Pacific transparent sea
squirt)
Length = 344
Score = 152 bits (368), Expect = 9e-36
Identities = 91/216 (42%), Positives = 107/216 (49%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
A L LLERKVLG QIRKGPN VG GL+Q D KL K+ F + SP+
Sbjct: 20 ALLVLLERKVLGLAQIRKGPNIVGIYGLMQTILDGGKLILKKLMVLFNIRKFFFLLSPIL 79
Query: 240 RFIXXXXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVA 419
F+ IP F L GIL L ++SL VY + AGW SN+ Y+L+GG+R VA
Sbjct: 80 GFVLSLMNWFFIPTPFILFHSEYGILLTLVISSLLVYTTLWAGWGSNNIYSLIGGIRGVA 139
Query: 420 QTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNRTP 599
Q ISYEV FF +Q AE NR P
Sbjct: 140 QMISYEVVLGFFIMLLLLLMGSYNWEFFLYFQSSYVFWGGMFMFMVSWIGMMLAELNRAP 199
Query: 600 FDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILF 707
FD EGE ELVSGFN+EY FAL+FL EY +I F
Sbjct: 200 FDLIEGESELVSGFNVEYGGFIFALLFLGEYMNIWF 235
>UniRef50_Q0H8X5 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=10; Fungi|Rep: NADH-ubiquinone oxidoreductase chain 1
- Ustilago maydis (Smut fungus)
Length = 331
Score = 152 bits (368), Expect = 9e-36
Identities = 88/217 (40%), Positives = 115/217 (52%), Gaps = 2/217 (0%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
AF+T++ERKV+G +Q R GPN VG+ LLQPF+DA+KL KE+ P+ + ++ +P+
Sbjct: 23 AFMTVIERKVMGSMQRRIGPNVVGYYALLQPFADALKLVIKEQVIPSQATKSLFFLAPMV 82
Query: 240 RFIXXXXXXXXIPYIFNLIC--FNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRS 413
I IP L F+LGIL+ L L+S+GVY ++ AGWS+NS YA LG LRS
Sbjct: 83 TLIFSLLGWGVIPLGPGLALSDFSLGILYSLALSSIGVYGILFAGWSANSKYAFLGSLRS 142
Query: 414 VAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNR 593
AQ ISYE+ Q+ AETNR
Sbjct: 143 TAQMISYELIYSAAVLAVILLCGTFNITEIIESQQSVWYIMPLLPIFILFFVSALAETNR 202
Query: 594 TPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSIL 704
TPFD E E ELV+GF E+ F FLAEY SI+
Sbjct: 203 TPFDLPEAESELVAGFMTEHSGMIFVFFFLAEYGSIV 239
>UniRef50_Q8WF33 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=2; Venerupis (Ruditapes) philippinarum|Rep:
NADH-ubiquinone oxidoreductase chain 1 - Venerupis
(Ruditapes) philippinarum
Length = 309
Score = 151 bits (366), Expect = 2e-35
Identities = 83/216 (38%), Positives = 113/216 (52%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
AF + ERK LG +Q+R+GPNKVG GL+Q +D +KLFTKE P F++ Y P+
Sbjct: 15 AFFIVTERKGLGMLQLRQGPNKVGLKGLVQFLADGVKLFTKEMIMPLFASEGLYTVGPLI 74
Query: 240 RFIXXXXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVA 419
F P +F+ + LG+LFFLC++S VY V + GWS +S Y LG +R++A
Sbjct: 75 CFFCAYSLWVLFPMMFSSLKITLGLLFFLCVSSAAVYGVFMVGWSCDSRYGFLGAMRAIA 134
Query: 420 QTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNRTP 599
Q++SYEV AETNR P
Sbjct: 135 QSVSYEV--FLSTCLFCPLILTGSYDLIESRCSPFSSVFIGFEVLVLWVICILAETNRPP 192
Query: 600 FDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILF 707
FDF EGE ELV+G+ +E+ FAL+ LAEYS++ F
Sbjct: 193 FDFVEGESELVAGYMVEFGGVNFALLALAEYSNMAF 228
>UniRef50_Q2YA20 Cluster: NADH-quinone oxidoreductase subunit H 2;
n=6; cellular organisms|Rep: NADH-quinone oxidoreductase
subunit H 2 - Nitrosospira multiformis (strain ATCC
25196 / NCIMB 11849)
Length = 366
Score = 148 bits (358), Expect = 2e-34
Identities = 83/227 (36%), Positives = 119/227 (52%), Gaps = 12/227 (5%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGL------LQPFSDAIKLFTKERTYPNFSNYFCY 221
A+LT ERK++GY+Q+R GPN+V F G+ QP +DA+K KE P+ +N +
Sbjct: 42 AYLTFAERKIIGYMQLRVGPNRVTFFGIPWLGGWAQPIADAVKAVMKEIIIPSGANKVLF 101
Query: 222 YFSPVFRFIXXXXXXXXIPYIFNLIC--FNLGILFFLCLTSLGVYIVIIAGWSSNSNYAL 395
+P+ F IP+ +++ N G+L+ L +TS+GVY +IIAGW+SNS YA
Sbjct: 102 VLAPILTFAPALAAWAVIPFSPDVVLADINAGLLYILAMTSMGVYGIIIAGWASNSKYAF 161
Query: 396 LGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQE----XXXXXXXXXXXXXXX 563
LG +RS AQ +SYE+ Q+
Sbjct: 162 LGAMRSAAQVVSYELAMGFALVCVLMMSQSLNLGDIVKGQQGASMLNWYLIPLFPMFLVY 221
Query: 564 XXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSIL 704
AETNR PFD AEGE E+V+GF++EY F + FLAEYS+++
Sbjct: 222 FISGVAETNRAPFDVAEGESEIVAGFHVEYSGMAFTVFFLAEYSNMI 268
>UniRef50_Q6EF18 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=78; Braconidae|Rep: NADH-ubiquinone oxidoreductase
chain 1 - Cotesia acuminata
Length = 218
Score = 147 bits (356), Expect = 3e-34
Identities = 74/181 (40%), Positives = 101/181 (55%)
Frame = +3
Query: 165 IKLFTKERTYPNFSNYFCYYFSPVFRFIXXXXXXXXIPYIFNLICFNLGILFFLCLTSLG 344
IKL KE +P S+++ Y SP+ FI P+ NL+ F +L+FLC+ SLG
Sbjct: 1 IKLLNKEYFFPMKSSFYLYIMSPMMMFILIMMTWMIYPFYSNLLFFENNMLYFLCMMSLG 60
Query: 345 VYIVIIAGWSSNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXX 524
+Y +I+AGWSSNS+++++G +RS+AQ+ISYEV + + +
Sbjct: 61 IYSLILAGWSSNSSFSMIGSIRSIAQSISYEVVFSIIILIMMTNINSMNLFNLIFFNKFN 120
Query: 525 XXXXXXXXXXXXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSIL 704
AE NRTPFD +EGE ELVSGFNIEY F LIFL+EYSSI+
Sbjct: 121 NFSLIYFPLMLIILFTMLAEINRTPFDLSEGESELVSGFNIEYSSSKFILIFLSEYSSII 180
Query: 705 F 707
F
Sbjct: 181 F 181
>UniRef50_Q4W8E1 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=4; Leptotrombidium|Rep: NADH-ubiquinone oxidoreductase
chain 1 - Leptotrombidium pallidum
Length = 293
Score = 146 bits (355), Expect = 4e-34
Identities = 82/215 (38%), Positives = 111/215 (51%)
Frame = +3
Query: 63 FLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFR 242
F TL+E ++LG I +R GP +VG IG+ QP SD +KLF K +P SN Y+ SP+
Sbjct: 18 FFTLMEVQMLGKIHLRLGPTRVGMIGIFQPLSDFLKLFNKSFWFPQKSNLSIYFISPLLC 77
Query: 243 FIXXXXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVAQ 422
F L IL F CL+SL V+ ++++GW+S+S Y+LLG RS AQ
Sbjct: 78 LFVGFIVWHGYGTKFPLTNIKWSILSFFCLSSLLVFYLLMSGWASSSTYSLLGSYRSAAQ 137
Query: 423 TISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNRTPF 602
TISYEV + L +E AE+NRTPF
Sbjct: 138 TISYEV--CLIFIIFSSIFFVKTFSIWELSEETPMLSLIHPILLLIWIFSCLAESNRTPF 195
Query: 603 DFAEGERELVSGFNIEYRRGGFALIFLAEYSSILF 707
D EGE ELVSGFN E++ G + F+ EY+ ++F
Sbjct: 196 DLTEGESELVSGFNTEFQGGLLSFFFITEYAFMIF 230
>UniRef50_P08774 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=60; Fungi|Rep: NADH-ubiquinone oxidoreductase chain 1
- Neurospora crassa
Length = 371
Score = 146 bits (354), Expect = 5e-34
Identities = 86/217 (39%), Positives = 110/217 (50%), Gaps = 2/217 (0%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
A++T+ ERK + +Q R GPN VG++GLLQ F+DA+KL KE +N ++ PV
Sbjct: 25 AYVTVAERKTMASMQRRLGPNAVGYLGLLQAFADALKLLLKEYVALTQANMTLFFLGPVI 84
Query: 240 RFIXXXXXXXXIPYIFNLIC--FNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRS 413
I IPY +L+ NLGIL+ L ++SL Y +++AGWS+NS YA LG LRS
Sbjct: 85 TLIFSLLGYAVIPYGPSLVIQDVNLGILYMLAVSSLATYGILLAGWSANSKYAFLGSLRS 144
Query: 414 VAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNR 593
AQ ISYE+ Q AETNR
Sbjct: 145 AAQLISYELVLSSAILLVIMLTGSFNLGVNTESQRAVLFVLPLLPIFIIFFIGSIAETNR 204
Query: 594 TPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSIL 704
PFD AE E ELVSGF E+ F FLAEY SI+
Sbjct: 205 APFDLAEAESELVSGFMTEHAAVVFVFFFLAEYGSIV 241
>UniRef50_P24887 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=24; Chromadorea|Rep: NADH-ubiquinone oxidoreductase
chain 1 - Caenorhabditis elegans
Length = 291
Score = 146 bits (354), Expect = 5e-34
Identities = 80/216 (37%), Positives = 109/216 (50%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
AF+TL ER +LG Q R GP KV F+GL Q D +KL KE+ P S+ + P
Sbjct: 20 AFITLYERHLLGSSQNRLGPTKVTFMGLAQALLDGVKLLKKEQMTPLNSSEVSFLLVPGI 79
Query: 240 RFIXXXXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVA 419
F+ +PY F+ I F +LFFLCL VY +I+G S S Y ++G +R+ +
Sbjct: 80 SFVVMYLEWFTLPYFFDFISFEYSVLFFLCLIGFSVYTTLISGIVSKSKYGMIGAIRASS 139
Query: 420 QTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNRTP 599
Q+ISYE+ ++ AE NR P
Sbjct: 140 QSISYEIAFSLYVLCIIIHNN--------VFNFVSKFNLSLLIIYIPFLIMVIAELNRAP 191
Query: 600 FDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILF 707
FDF+EGERELV GFN+E+ R F L+FL+EY S++F
Sbjct: 192 FDFSEGERELVRGFNVEFARVAFVLLFLSEYGSLIF 227
>UniRef50_P24875 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=22; Chromadorea|Rep: NADH-ubiquinone oxidoreductase
chain 1 - Ascaris suum (Pig roundworm) (Ascaris
lumbricoides)
Length = 290
Score = 146 bits (354), Expect = 5e-34
Identities = 79/216 (36%), Positives = 109/216 (50%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
AF+TL ER +LG Q R GPNKV F+G LQ D +KL KE+ P S+ + P
Sbjct: 20 AFVTLYERHLLGGSQQRIGPNKVSFMGFLQAIFDGVKLLKKEQMTPLNSSEISFILVPGI 79
Query: 240 RFIXXXXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVA 419
FI +P+ ++ + F ILFFLCL VY +++G S S Y ++G +R+ +
Sbjct: 80 FFIVMYLEWFVLPFFYDFMTFEYSILFFLCLIGFSVYTTLVSGMVSKSKYGMVGAIRASS 139
Query: 420 QTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNRTP 599
Q++SYE+ + F+ AE NR P
Sbjct: 140 QSVSYEIAFSLYLLAIVMHINMFCFFSFF--------NLSLFIVYLPFLFMVLAELNRAP 191
Query: 600 FDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILF 707
FDFAEGE ELVSG+N+EY F L+FL EY ++LF
Sbjct: 192 FDFAEGESELVSGYNVEYSSVAFVLLFLGEYGALLF 227
>UniRef50_Q2QAT5 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=6; Unionidae|Rep: NADH-ubiquinone oxidoreductase chain
1 - Lamprotula rochechouarti
Length = 206
Score = 144 bits (348), Expect = 2e-33
Identities = 70/127 (55%), Positives = 83/127 (65%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
AF TLLERK LGY QIRKGPNKVG IG+ QP +DA+KLF KE P SNY + +P
Sbjct: 21 AFFTLLERKALGYFQIRKGPNKVGMIGIPQPLADALKLFVKEWVMPTSSNYLPFIMTPTI 80
Query: 240 RFIXXXXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVA 419
I P LG+L FLC++SL VY ++AGWSSNS YALLG +R++A
Sbjct: 81 MLILALSLWQLYPSFMLTSQMILGMLLFLCISSLAVYTTLMAGWSSNSKYALLGAIRAMA 140
Query: 420 QTISYEV 440
QTISYEV
Sbjct: 141 QTISYEV 147
>UniRef50_Q82TV0 Cluster: NADH-quinone oxidoreductase subunit H;
n=313; cellular organisms|Rep: NADH-quinone
oxidoreductase subunit H - Nitrosomonas europaea
Length = 366
Score = 142 bits (344), Expect = 8e-33
Identities = 83/227 (36%), Positives = 115/227 (50%), Gaps = 12/227 (5%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFI------GLLQPFSDAIKLFTKERTYPNFSNYFCY 221
A+LT ERK++ Y+Q+R GPN+V F G QP +DA+K KE P +N F +
Sbjct: 42 AYLTFAERKIIAYMQVRVGPNRVTFFDIPWLRGWGQPIADAVKAIMKEIIIPTGANKFLF 101
Query: 222 YFSPVFRFIXXXXXXXXIPYIFNLIC--FNLGILFFLCLTSLGVYIVIIAGWSSNSNYAL 395
+PV +P+ L+ N G+L+ L +TSLGVY VIIAGW+SNS YA
Sbjct: 102 LLAPVLAIGPALAAWAVVPFSPELVLADINAGLLYILAMTSLGVYGVIIAGWASNSKYAF 161
Query: 396 LGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQE----XXXXXXXXXXXXXXX 563
LG +RS AQ +SYE+ Q+
Sbjct: 162 LGAMRSAAQVVSYELAMGFALVCVLMMSSSLNLGDIVAGQQGGSFLNWYLIPLFPMFLVY 221
Query: 564 XXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSIL 704
AETNR PFD AEGE E+V+GF+++Y F + FLAEY++++
Sbjct: 222 FISGVAETNRAPFDVAEGESEIVAGFHVDYSGMAFTVFFLAEYANMI 268
>UniRef50_Q68PI9 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=5; Aleyrodinae|Rep: NADH-ubiquinone oxidoreductase
chain 1 - Vasdavidius concursus
Length = 307
Score = 141 bits (342), Expect = 1e-32
Identities = 81/217 (37%), Positives = 110/217 (50%), Gaps = 2/217 (0%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
AF TLLERK++ + Q R GP KV F+G++QP SDA+KL +KE SN + P+
Sbjct: 20 AFFTLLERKMISFSQNRTGPMKVSFLGIIQPISDAMKLISKETKLNLKSNSMLFILCPMI 79
Query: 240 RFIXXXXXXXXIP--YIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRS 413
I +P Y+FN + + +LF L + ++I WSSNSNYA++ +R+
Sbjct: 80 NLITSILIWTIMPSEYMFNFM--KMSLLFMLAAMATNTVSIMIMSWSSNSNYAMISMIRT 137
Query: 414 VAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNR 593
+AQ ISYE+ Y AET+R
Sbjct: 138 IAQMISYEINIILIVLTFMVIMEKMNLSSCY---NNIMLSMYMPYMLIMWLITIMAETSR 194
Query: 594 TPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSIL 704
+PFDF+E E EL+SGFNIEY F +FLAEYS IL
Sbjct: 195 SPFDFSESESELISGFNIEYSSKSFVFLFLAEYSMIL 231
>UniRef50_Q2HJL2 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=1; Campanulotes bidentatus compar|Rep: NADH-ubiquinone
oxidoreductase chain 1 - Campanulotes bidentatus compar
(small pigeon louse)
Length = 299
Score = 141 bits (342), Expect = 1e-32
Identities = 86/216 (39%), Positives = 109/216 (50%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
AF +L ERK++G +Q RKGPNKVG G+LQPF+DA+KL +K P+ F Y SP+
Sbjct: 23 AFFSLYERKLMGLVQGRKGPNKVGVGGVLQPFADAMKLISKNEYAPSKVIKFIYAVSPMI 82
Query: 240 RFIXXXXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVA 419
F P I+N NL I+F L L S+ VY I++GW S+S YA +G R++A
Sbjct: 83 SFFISLVFWIMYPVIWNFFSLNLSIVFLLVLFSVSVYGFILSGWFSSSKYANIGCARALA 142
Query: 420 QTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNRTP 599
Q+ISYEV QE AETNR P
Sbjct: 143 QSISYEVGLTLSIIFFCLFFSCISLSEILEVQE-FFFFFPFSFLFVFMWSIFFAETNRPP 201
Query: 600 FDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILF 707
FD AEGE EL GF ++ LIFL E S+LF
Sbjct: 202 FDLAEGESELKKGFCVKKGEMSNPLIFLGENLSVLF 237
>UniRef50_Q950Q6 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=6; Chytridiomycota|Rep: NADH-ubiquinone oxidoreductase
chain 1 - Spizellomyces punctatus
Length = 301
Score = 141 bits (342), Expect = 1e-32
Identities = 81/218 (37%), Positives = 107/218 (49%), Gaps = 3/218 (1%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
A +TL ER ++G +Q R GPNKVG++GLLQPF+D IKL KE P S+++ + +P
Sbjct: 16 ALMTLAERNIMGAMQRRIGPNKVGYLGLLQPFADGIKLILKETVLPLESSHWLFLGAPFV 75
Query: 240 RFIXXXXXXXXIPYIFNLICFNL---GILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLR 410
F +P + + L GIL + ++ L +Y VI +GW++NS Y LG LR
Sbjct: 76 TFYLALLNWLVLPLDYGVALSELLGGGILILIAISELSIYGVIYSGWAANSKYPFLGSLR 135
Query: 411 SVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETN 590
S AQ ISY V Q+ AETN
Sbjct: 136 STAQMISYSVSLSLILLTVIFTLGTVNLLDILAAQQPVSLFYPLLPMAILFMISAVAETN 195
Query: 591 RTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSIL 704
R PFD E E ELV+GF E+ FA FL EY+SIL
Sbjct: 196 RAPFDLPEAESELVAGFFTEHSAVSFAYFFLGEYTSIL 233
>UniRef50_Q6VEI0 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=1; Siphonodentalium lobatum|Rep: NADH-ubiquinone
oxidoreductase chain 1 - Siphonodentalium lobatum
Length = 295
Score = 141 bits (341), Expect = 2e-32
Identities = 86/216 (39%), Positives = 112/216 (51%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
+F T++ERK L Y Q RKGPNKV F+GLLQ +D +KL +K P SN+ + +P+
Sbjct: 21 SFYTIVERKCLSYAQSRKGPNKVVFLGLLQAVADGVKLLSKSMNEPFKSNFVYFTGAPMV 80
Query: 240 RFIXXXXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVA 419
+P + IL LCL + VY +I +GW S S+Y+++G +R+VA
Sbjct: 81 MLGISLTCWYFLPGLGFKSAVG-PILLVLCLFGVNVYCLIFSGWCSYSSYSMIGCVRAVA 139
Query: 420 QTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNRTP 599
Q++SYEV F+L AETNR P
Sbjct: 140 QSVSYEV-----CSFFSYCAQQLLEVTFFL-GSSTSFFFSFLFIVILWMFVCMAETNRAP 193
Query: 600 FDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILF 707
FDFAEGE ELVSGFN+EY F LIFLAEY ILF
Sbjct: 194 FDFAEGESELVSGFNVEYGSSLFTLIFLAEYGFILF 229
>UniRef50_Q2RYV5 Cluster: NADH-quinone oxidoreductase subunit H;
n=3; Sphingobacteriales genera incertae sedis|Rep:
NADH-quinone oxidoreductase subunit H - Salinibacter
ruber (strain DSM 13855)
Length = 345
Score = 140 bits (339), Expect = 3e-32
Identities = 81/218 (37%), Positives = 108/218 (49%), Gaps = 7/218 (3%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
+ L ER+V +IQ R GPN+VG +GLLQPF+D +K KE P SN F + +PV
Sbjct: 24 SLLVFAERRVSAFIQNRPGPNRVGPLGLLQPFADVLKFVLKEDVQPAQSNKFIHSMAPVV 83
Query: 240 RFIXXXXXXXXIPYIFNLIC--FNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRS 413
+ IP+ ++ N+G++ L LTS+ VY V +AGWSSNS ++LLGGLRS
Sbjct: 84 MVVIAMTTASLIPFAEGVVVADLNVGVIMLLALTSISVYGVTLAGWSSNSKFSLLGGLRS 143
Query: 414 VAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQE-----XXXXXXXXXXXXXXXXXXXX 578
AQ +SYE+ +Q
Sbjct: 144 AAQMVSYELSMGLAVISVVLIAGSLNFMEIVEHQSSGGALLGWNAVRNPIGCLIFIVTAF 203
Query: 579 AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEY 692
AETNR PFD E E ELV+G++ EY F + FLAEY
Sbjct: 204 AETNRAPFDLPEAEEELVAGYHTEYSGMKFGMFFLAEY 241
>UniRef50_Q9ZY22 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=1; Pedinomonas minor|Rep: NADH-ubiquinone
oxidoreductase chain 1 - Pedinomonas minor
Length = 310
Score = 137 bits (331), Expect = 3e-31
Identities = 81/215 (37%), Positives = 103/215 (47%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
AFL L+ERKV+ YIQ R+GP VGF G LQ +D +KL K YY SP
Sbjct: 27 AFLVLIERKVIAYIQRRRGPVFVGFWGALQSIADGLKLILKTNLSVFGIEKSIYYASPFI 86
Query: 240 RFIXXXXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVA 419
F IP F L ++ + F L L S+GVY +++AG SS+S +A LGGLRS A
Sbjct: 87 SFFISLLSWVFIPLGFLLQDSDISLFFILALNSIGVYGILLAGLSSSSRWAFLGGLRSAA 146
Query: 420 QTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNRTP 599
Q ISYE+ +QE AE NR P
Sbjct: 147 QIISYELSLNICIFSIILCVGGLSIIKVVSFQENILLVFPLLPFILISFIISLAEINRAP 206
Query: 600 FDFAEGERELVSGFNIEYRRGGFALIFLAEYSSIL 704
FD E E ELV+G+N++Y F FL EY+ I+
Sbjct: 207 FDLPEAEAELVAGYNVDYGAINFTFFFLGEYTHIV 241
>UniRef50_Q00L96 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=120; Protostomia|Rep: NADH-ubiquinone oxidoreductase
chain 1 - Branchellion sp. Borneo
Length = 205
Score = 136 bits (330), Expect = 4e-31
Identities = 74/186 (39%), Positives = 94/186 (50%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
AF TLLERK+LGY Q+RKGPNKV +G+ QP +DA KLF KE+ P SN + SP+
Sbjct: 21 AFYTLLERKLLGYFQLRKGPNKVSIMGIPQPLADAAKLFLKEQHTPMTSNKLSFIMSPIL 80
Query: 240 RFIXXXXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVA 419
P++ IL+ LC++++ VY ++GWSSNS Y+LLG LR VA
Sbjct: 81 GLFLTLMLWGSYPHLNPSFWIQFSILYILCVSAMNVYATFVSGWSSNSKYSLLGALRGVA 140
Query: 420 QTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNRTP 599
QTISYE+ L AETNR+P
Sbjct: 141 QTISYEISMSLILLSVLLMTMNMDMNKINL-NSMSPLFMSLILITILWFITNLAETNRSP 199
Query: 600 FDFAEG 617
FDFAEG
Sbjct: 200 FDFAEG 205
>UniRef50_Q6SL32 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=1; Armillifer armillatus|Rep: NADH-ubiquinone
oxidoreductase chain 1 - Armillifer armillatus
Length = 305
Score = 136 bits (329), Expect = 5e-31
Identities = 80/216 (37%), Positives = 110/216 (50%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
AF+TL+ERK+L +Q R+GPNKVG G LQPFSDA+KL +K + Y
Sbjct: 20 AFVTLVERKILSLVQWREGPNKVGG-GYLQPFSDALKLVSKGWVVLGEGDLGGYVMGAWL 78
Query: 240 RFIXXXXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVA 419
P + + +L F+ + S+ VY ++++GW SNS Y LLGG+RSVA
Sbjct: 79 FIFLMMLLWGMYPTFWGVYSLEWTLLCFILVLSVSVYGLLVSGWMSNSKYGLLGGVRSVA 138
Query: 420 QTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNRTP 599
QT+SYEV Y + E +E NR+P
Sbjct: 139 QTVSYEV---SLVLVVMYWVLYMGGYGLEVTMEGVWLVFLNILMFVIMGVVCISELNRSP 195
Query: 600 FDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILF 707
FDF+EGE ELVSG+N+EY F IF++EY ++F
Sbjct: 196 FDFSEGESELVSGYNVEYGSLLFVYIFMSEYGFVVF 231
>UniRef50_Q9T7K1 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=3; Crassostrea|Rep: NADH-ubiquinone oxidoreductase
chain 1 - Crassostrea gigas (Pacific oyster)
(Crassostrea angulata)
Length = 340
Score = 135 bits (327), Expect = 9e-31
Identities = 77/215 (35%), Positives = 103/215 (47%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
A+ TL+ERK L + IR GP+K+ F GL QP SD +KLFTKE P+ S ++ P
Sbjct: 50 AYFTLMERKCLSSLGIRLGPDKISFAGLAQPISDGMKLFTKEFVAPSNSAKLGFFLIPCV 109
Query: 240 RFIXXXXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVA 419
+ P ILFFL ++S+ ++ I++GW+S+S YA +GG+R A
Sbjct: 110 AMLLCFLGWQIYPCSSTSPSMGNDILFFLVVSSVNAHVAIMSGWTSSSKYASVGGVRGFA 169
Query: 420 QTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNRTP 599
Q ISYE+ + AE NR P
Sbjct: 170 QVISYEICLSITLVAVMFFSGSMSFFSLSDSGWSMWWGLYCAPVAALWVVICLAEANRAP 229
Query: 600 FDFAEGERELVSGFNIEYRRGGFALIFLAEYSSIL 704
FD E E ELVSGFN E+ G FA +F+AEY IL
Sbjct: 230 FDLVEAESELVSGFNTEFSAGSFAGLFIAEYGMIL 264
>UniRef50_Q9B8A1 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=1; Trichinella spiralis|Rep: NADH-ubiquinone
oxidoreductase chain 1 - Trichinella spiralis (Trichina
worm)
Length = 299
Score = 135 bits (326), Expect = 1e-30
Identities = 79/219 (36%), Positives = 108/219 (49%), Gaps = 4/219 (1%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
AF+TL+ER+ +G Q R GPNKV GL+QP D +KL K N N Y P+
Sbjct: 20 AFVTLMERQYIGISQRRLGPNKVSITGLMQPILDGLKLTLKSTKKTNKLNPTFYLLMPIM 79
Query: 240 RFIXXXXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVA 419
+P ++N I F + +LF + L + + ++++GW SNS YA G LRS++
Sbjct: 80 NLTLFTLFWWGLPLLYNPISFQVNLLFTITLMGIMSFGIVLSGWVSNSKYATYGSLRSMS 139
Query: 420 QTISYEV----RXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAET 587
Q+ISYEV FY ++ AET
Sbjct: 140 QSISYEVCLSTTLLMIMMLKDSYNLATTKTGFYYFE-----PTITLALTIPATIMILAET 194
Query: 588 NRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSIL 704
NR+PFD AE E ELVSGFNIE+ FA +F+AEY I+
Sbjct: 195 NRSPFDLAEAESELVSGFNIEFSSVEFAFLFMAEYGMII 233
>UniRef50_A5UVG2 Cluster: NADH dehydrogenase; n=5; Chloroflexi
(class)|Rep: NADH dehydrogenase - Roseiflexus sp. RS-1
Length = 391
Score = 134 bits (324), Expect = 2e-30
Identities = 80/225 (35%), Positives = 108/225 (48%), Gaps = 10/225 (4%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
A+ TL ER+ L +Q R GPN+ G G LQP +DA+KLF KE P ++ + Y SP F
Sbjct: 25 AYFTLFERRTLARLQNRVGPNRAGPGGFLQPIADAVKLFFKEDVTPLLADRWVYLVSPAF 84
Query: 240 RFIXXXXXXXXIPY----------IFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNY 389
I IP L N+G+L+ L +TS+GVY + IAGW+SN+ Y
Sbjct: 85 ALIPAIIIWATIPVGMWPDGQGGNWLQLAEINVGVLYLLAVTSVGVYGIAIAGWASNNKY 144
Query: 390 ALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXX 569
++LGG+R+ AQ ISYE+ Q
Sbjct: 145 SMLGGIRASAQVISYELALGLTVLGAVMQTQSFSTAEIVERQMQMWNIVPQFLGFVVFII 204
Query: 570 XXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSIL 704
AE R PFD E E+ELV G+N EY FAL F++EY ++
Sbjct: 205 AATAEVVRAPFDLVEAEQELVGGYNTEYSSMKFALFFMSEYVKLV 249
>UniRef50_Q3ZXR7 Cluster: NADH-quinone oxidoreductase subunit H;
n=5; Bacteria|Rep: NADH-quinone oxidoreductase subunit H
- Dehalococcoides sp. (strain CBDB1)
Length = 353
Score = 134 bits (323), Expect = 3e-30
Identities = 72/212 (33%), Positives = 111/212 (52%), Gaps = 2/212 (0%)
Frame = +3
Query: 75 LERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFIXX 254
LER+++G Q+R GPN+ G GLLQP +DAIK+ KE P+ ++ ++ +P+ F+
Sbjct: 29 LERRLIGRFQLRPGPNRAGPFGLLQPIADAIKVLIKEDIIPSEADKGVFWLAPLVAFVPV 88
Query: 255 XXXXXXIPYI--FNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVAQTI 428
IP+ L+ N+GIL+ L ++S+ V + +AGWSSN+ Y+LLG +R++AQ +
Sbjct: 89 MLMFAAIPFADGVMLVDLNIGILYILAVSSVTVIGIFMAGWSSNNKYSLLGAMRTIAQEV 148
Query: 429 SYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNRTPFDF 608
SYE+ Q+ AE NRTPFD
Sbjct: 149 SYEIPLVLSILGVVMLTGSLSMNEIVKAQD-VPFILLQPLGFFVYLSAAMAEVNRTPFDL 207
Query: 609 AEGERELVSGFNIEYRRGGFALIFLAEYSSIL 704
E E E+++GF+ EY F L +L EY+ +L
Sbjct: 208 LEAESEIIAGFHTEYSGMKFGLFYLMEYAEVL 239
>UniRef50_Q1AVI7 Cluster: NADH-quinone oxidoreductase subunit H;
n=1; Rubrobacter xylanophilus DSM 9941|Rep: NADH-quinone
oxidoreductase subunit H - Rubrobacter xylanophilus
(strain DSM 9941 / NBRC 16129)
Length = 331
Score = 132 bits (320), Expect = 6e-30
Identities = 80/219 (36%), Positives = 110/219 (50%), Gaps = 5/219 (2%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
A LTL ERKV YIQ+R GPN+VG GLLQP +D +KLF KE P ++ + + +P+
Sbjct: 29 AVLTLAERKVSAYIQLRYGPNRVGPRGLLQPAADVVKLFIKENVSPGRADRWVFLAAPIA 88
Query: 240 RFIXXXXXXXXIPYIFNLIC--FNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRS 413
F+ IP+ ++ N+G+++F +TS+G VI+AG+ S SN++LLG LR
Sbjct: 89 MFLPAAAVWLVIPFGPGMVVADLNIGLVYFFAITSIGALGVIMAGYGSRSNFSLLGALRG 148
Query: 414 VAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQE---XXXXXXXXXXXXXXXXXXXXAE 584
Q ISYEV YQ AE
Sbjct: 149 AGQMISYEVPLILSLLGVAMLTGSLSMVDIVEYQAGGFWNWIIWPQLPMFLAFFVSGLAE 208
Query: 585 TNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSI 701
R PFD EGE E+V GF IEY +ALI +E++S+
Sbjct: 209 VKRIPFDLPEGESEIVGGFMIEYSGMTWALIQASEFASM 247
>UniRef50_A2D6E8 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=8; Bilateria|Rep: NADH-ubiquinone oxidoreductase chain
1 - Gyrodactylus salaris (Flatworm)
Length = 295
Score = 132 bits (318), Expect = 1e-29
Identities = 80/213 (37%), Positives = 100/213 (46%), Gaps = 2/213 (0%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
AF L ERKVLGYIQ+RKGPNK G GL+Q F+D KL K +TY +F + V+
Sbjct: 19 AFFILAERKVLGYIQLRKGPNKTGIAGLMQSFADLAKLVLKAKTY-SFQYRSLFSLFGVY 77
Query: 240 RFIXXXXXXXXIPYIFNLICFNLG--ILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRS 413
+ I +FNL +N +L F LTSL Y ++ GW SN+ Y+L G LRS
Sbjct: 78 LIVLVSMLYCNIYALFNL-GYNSPYLLLMFFLLTSLSSYSILSVGWGSNNKYSLYGSLRS 136
Query: 414 VAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNR 593
+SYE+ Y Y ETNR
Sbjct: 137 SFGAVSYEMSFMCFLLTIGSVLGFYSLYDSYFSYSVYSSILLLWPIYLIFILCSLCETNR 196
Query: 594 TPFDFAEGERELVSGFNIEYRRGGFALIFLAEY 692
PFDFAE E +LVSGFN E+ F +F EY
Sbjct: 197 VPFDFAESESDLVSGFNTEFCNLHFVCLFACEY 229
>UniRef50_Q9T9H0 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=1; Halocynthia roretzi|Rep: NADH-ubiquinone
oxidoreductase chain 1 - Halocynthia roretzi (Sea
squirt)
Length = 298
Score = 131 bits (317), Expect = 1e-29
Identities = 83/218 (38%), Positives = 108/218 (49%), Gaps = 2/218 (0%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
AFL LLERK+ G Q+R GPN VG GL+Q D +KL K + N+F + P+
Sbjct: 17 AFLVLLERKIFGLTQVRLGPNVVGASGLVQTIGDGVKLLLKRFFLFSKLNFF-FRVCPMV 75
Query: 240 RFIXXXXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVA 419
FI +P+ +L +LF ++ + VY+V+ AGW S+S + LLG +R V+
Sbjct: 76 GFILSIVHWLVLPFPGSLWHMGWSVLFTFAVSGVLVYVVLWAGWGSDSVFGLLGSVRGVS 135
Query: 420 QTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQE--XXXXXXXXXXXXXXXXXXXXAETNR 593
Q ISYEV Y+ E AE NR
Sbjct: 136 QMISYEV---VFMFFVLLFSIEVWSYWLGGVCEGTGVFGIYFKFLLVLVWGVIVLAELNR 192
Query: 594 TPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILF 707
TPFD EGE ELVSGFN+EY GF L+FLAEY +I F
Sbjct: 193 TPFDLVEGESELVSGFNVEYAGFGFTLLFLAEYMNIWF 230
>UniRef50_Q8F7Q5 Cluster: NADH-quinone oxidoreductase subunit H;
n=4; Leptospira|Rep: NADH-quinone oxidoreductase subunit
H - Leptospira interrogans
Length = 346
Score = 131 bits (317), Expect = 1e-29
Identities = 88/236 (37%), Positives = 109/236 (46%), Gaps = 21/236 (8%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
A+ TL ERKV G+IQ RKGPN+ GF GLLQP +D IK TKE +P N Y +P
Sbjct: 25 AYYTLAERKVAGFIQDRKGPNRAGFWGLLQPLADGIKFLTKEEVFPVQVNKVMYLIAPAI 84
Query: 240 RFIXXXXXXXXIPY-----------------IFNLICFN--LGILFFLCLTSLGVYIVII 362
+P +L N GILF ++SL VY +II
Sbjct: 85 SMTCAIMAWSVVPLGGQIPLPSWLQEKTGLTFLDLQIANPDTGILFLFAISSLAVYGIII 144
Query: 363 AGWSSNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQE--XXXXXX 536
AGW+SN+ Y+LLG +RS AQ ISYE+ Q
Sbjct: 145 AGWASNNKYSLLGAVRSTAQMISYELPLGMSVVSIVILSGSLRLTDISASQVGLWNIFKL 204
Query: 537 XXXXXXXXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSIL 704
AETNR PFD AE E ELV GF+ EY FAL F+AEY +++
Sbjct: 205 PGFIAFCLFVVAMFAETNRLPFDLAEAESELVVGFHTEYGAFKFALFFIAEYMNMI 260
>UniRef50_A3RE56 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=2; Metaseiulus occidentalis|Rep: NADH-ubiquinone
oxidoreductase chain 1 - Metaseiulus occidentalis
(western predatory mite)
Length = 270
Score = 129 bits (311), Expect = 8e-29
Identities = 79/218 (36%), Positives = 107/218 (49%), Gaps = 2/218 (0%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
AFLTL+ERK+LGY+QIRKGPNK+ +GL+QP D +KLF KE Y N F + P
Sbjct: 17 AFLTLMERKILGYMQIRKGPNKMSVLGLVQPVLDGMKLFMKESFYIKSVNKFMFNVFPFL 76
Query: 240 RFIXXXXXXXXIPYIFNLI-CFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSV 416
F+ Y+FN + ++FF+ ++ L V+ V+ W+SNS YALLG R V
Sbjct: 77 FFM--LMMNCWFMYMFNKYHIVSYSLVFFILISGLSVHSVLGVSWASNSKYALLGAYRLV 134
Query: 417 AQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQE-XXXXXXXXXXXXXXXXXXXXAETNR 593
+QT+SYEV ++ AE NR
Sbjct: 135 SQTVSYEVGLVFLLMNFVLLSKSYNLLDLMVFNNFSLMSFYIMFNLFLIWLVVMLAELNR 194
Query: 594 TPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILF 707
PF F + IE+ G FAL+FLAEY +I+F
Sbjct: 195 APFVFLWESKSAGFWVYIEFGSGKFALLFLAEYGNIIF 232
>UniRef50_Q5KUJ9 Cluster: NADH-quinone oxidoreductase subunit H;
n=12; Firmicutes|Rep: NADH-quinone oxidoreductase
subunit H - Geobacillus kaustophilus
Length = 333
Score = 129 bits (311), Expect = 8e-29
Identities = 76/217 (35%), Positives = 108/217 (49%), Gaps = 6/217 (2%)
Frame = +3
Query: 60 AFLT---LLERKVLGYIQIRKGPNKVGF-IGLLQPFSDAIKLFTKERTYPNFSNYFCYYF 227
AF+T L ERKV+G++Q R GPN+VG GLLQ +D +KL KE T P ++ Y
Sbjct: 31 AFVTYGILAERKVMGFMQGRIGPNQVGGRFGLLQTVADVLKLLLKEDTIPKAADRPLYVL 90
Query: 228 SPVFRFIXXXXXXXXIPYI--FNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLG 401
+P+ F+ +P+ F +G+L+++ ++ L V+ GW+SN+ YALLG
Sbjct: 91 APIIAFVPSFMVLAVLPFTDAFRFADIGVGLLYYIAVSGLTTVGVVAGGWASNNKYALLG 150
Query: 402 GLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXA 581
G+R+ AQ ISYE+ Q+ A
Sbjct: 151 GMRAAAQMISYEIPLVMSALGVVLLAGSMNLVDIVAAQKDVWFIFAQPLAFLIFLIAAVA 210
Query: 582 ETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEY 692
E NRTPFD E E ELV+GF++EY +A LAEY
Sbjct: 211 ELNRTPFDLPEAESELVAGFHVEYSGFRWAFFMLAEY 247
>UniRef50_A0LJM4 Cluster: NADH-quinone oxidoreductase subunit H 2;
n=5; Proteobacteria|Rep: NADH-quinone oxidoreductase
subunit H 2 - Syntrophobacter fumaroxidans (strain DSM
10017 / MPOB)
Length = 331
Score = 126 bits (305), Expect = 4e-28
Identities = 78/222 (35%), Positives = 102/222 (45%), Gaps = 11/222 (4%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
A+L LERK L +QIR GPN+ G GLLQP +D +K+ KE T P + + +P
Sbjct: 27 AYLVWLERKFLARLQIRYGPNRAGKFGLLQPIADIVKMVAKEDTVPEGAERTIFMLAPAV 86
Query: 240 RFIXXXXXXXXIPYIFNLICF-----------NLGILFFLCLTSLGVYIVIIAGWSSNSN 386
IP+ ++ + N+G+L+F L+SLGVY V + GW+SNS
Sbjct: 87 VAATALLVFAVIPFGKDVTLWGMKIPLVVADLNVGLLYFFALSSLGVYGVALGGWASNSK 146
Query: 387 YALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXX 566
Y+LLGG+R AQ ISYE+ QE
Sbjct: 147 YSLLGGIRGAAQMISYELSLGLAIVPVVMQARSFSLVDIVQAQEKYPFILTQPVAFAIFV 206
Query: 567 XXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEY 692
AE R PFD E E EL +GF+ EY F L FL EY
Sbjct: 207 ISAMAEIKRIPFDLPEAENELGAGFHTEYSGMRFGLFFLGEY 248
>UniRef50_Q5W905 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=1; Lingula anatina|Rep: NADH-ubiquinone oxidoreductase
chain 1 - Lingula unguis
Length = 318
Score = 124 bits (299), Expect = 2e-27
Identities = 73/215 (33%), Positives = 101/215 (46%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
AF +L ER +L + R+ P VG G+LQP +D +KL+ K+ SN+ Y P
Sbjct: 29 AFYSLSERAILSLVAGRQSPGIVGLRGVLQPMADGMKLYMKDMIRLAQSNHLAYVLCPSV 88
Query: 240 RFIXXXXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVA 419
P+ + + L FLC SL ++IAGW+SNS Y+L+ +RS+A
Sbjct: 89 SLGLSFAAWSVFPF-WGTYSLEVSALLFLCFISLSAIPIMIAGWASNSKYSLMASVRSLA 147
Query: 420 QTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNRTP 599
Q ISYEV + AETNR+P
Sbjct: 148 QAISYEVVLGLLLVFPLLFTHSLEMSSVAAPTQSIWVALAFPPLFGMWLACILAETNRSP 207
Query: 600 FDFAEGERELVSGFNIEYRRGGFALIFLAEYSSIL 704
FD E E ELVSG+N+EY FAL F++EYS++L
Sbjct: 208 FDLVEAESELVSGYNVEYSGLHFALFFMSEYSNML 242
>UniRef50_A0LRI8 Cluster: NADH-quinone oxidoreductase subunit H;
n=3; Bacteria|Rep: NADH-quinone oxidoreductase subunit H
- Acidothermus cellulolyticus (strain ATCC 43068 / 11B)
Length = 451
Score = 123 bits (297), Expect = 4e-27
Identities = 76/225 (33%), Positives = 104/225 (46%), Gaps = 11/225 (4%)
Frame = +3
Query: 63 FLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFR 242
F+ ER+V+ +Q R GPN+VG GLLQ +D +KL KE P ++ + +PV
Sbjct: 48 FMIWAERRVVARMQQRIGPNRVGPFGLLQSLADGLKLALKEDIVPTLADKAVFILAPVIS 107
Query: 243 FIXXXXXXXXIPY-----------IFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNY 389
IP+ L + +LF L ++SLGVY +++AGWSS S Y
Sbjct: 108 ATPAFLAFAVIPFGPTVSIAGHHTNLQLTDLPVAVLFVLAMSSLGVYGIVLAGWSSGSPY 167
Query: 390 ALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXX 569
LLGG+RS AQ +SYE+ Q
Sbjct: 168 PLLGGVRSAAQVVSYEIAMGLSFVGVFLYSGSLSTSDIVAAQAHRWGILWAGVSFAVYAI 227
Query: 570 XXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSIL 704
ETNR PFD EGE E+V GF+ EY FAL +LAEY +++
Sbjct: 228 AMVGETNRAPFDLPEGETEIVGGFHTEYTSLKFALFYLAEYINMV 272
>UniRef50_Q9RU94 Cluster: NADH-quinone oxidoreductase subunit H;
n=9; Bacteria|Rep: NADH-quinone oxidoreductase subunit H
- Deinococcus radiodurans
Length = 397
Score = 122 bits (294), Expect = 9e-27
Identities = 81/231 (35%), Positives = 112/231 (48%), Gaps = 16/231 (6%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
A++TL+ER++LG IQ+R GPN+VG +GLLQP +DAIK KE ++ Y +P+
Sbjct: 27 AYMTLIERRLLGRIQLRPGPNRVGPMGLLQPLADAIKSIFKEDVTVTLADKLVYTLAPIL 86
Query: 240 RFIXXXXXXXXI------------PYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNS 383
I P+++NL + GIL L LTS+GVY + + GW+S S
Sbjct: 87 AIGMALTAFGGIPAGPPGSLFGTDPWVYNL---DAGILALLALTSMGVYGIFLGGWASGS 143
Query: 384 NYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQE----XXXXXXXXXXX 551
Y +LG LRS AQ ISYE+ +Q
Sbjct: 144 KYPMLGSLRSSAQMISYELGMGLSVLGLLMLVGSTNFLDIVEWQAGPRGHGWLILFQVFA 203
Query: 552 XXXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSIL 704
AE NRTPFD E E+ELV+G+ EY +AL +AEY +I+
Sbjct: 204 FALFMVSSFAEVNRTPFDLPEAEQELVAGYLTEYSSIKWALFQMAEYVNIM 254
>UniRef50_Q4FU58 Cluster: NADH-quinone oxidoreductase subunit H;
n=74; cellular organisms|Rep: NADH-quinone
oxidoreductase subunit H - Psychrobacter arcticum
Length = 347
Score = 122 bits (293), Expect = 1e-26
Identities = 70/217 (32%), Positives = 103/217 (47%), Gaps = 2/217 (0%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
A + + ER++L Q R GPN+VG G LQ +D +K+F KE PNF++ F + +P
Sbjct: 44 AMMIIYERRMLALWQDRYGPNRVGPFGSLQLVADMLKIFFKEDWTPNFTDKFMFTLAPAV 103
Query: 240 RFIXXXXXXXXIPY--IFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRS 413
IP + +++GILFF + + VY V+ GW+S + ++LLGGLRS
Sbjct: 104 AMFTALASFAIIPISPTLGVADWDIGILFFFAMAGIAVYAVLFGGWASANKFSLLGGLRS 163
Query: 414 VAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNR 593
AQTISYEV Q A T+R
Sbjct: 164 AAQTISYEVFLGLSLMGVVALTGSFNLRAIVEAQADGWYIIPQFFGFLTFVVAGVAVTHR 223
Query: 594 TPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSIL 704
PFD E E+EL G+++EY F + F+ EY +++
Sbjct: 224 HPFDQPEAEQELAEGYHVEYSGMKFGMFFIGEYVNVV 260
>UniRef50_Q81K04 Cluster: NADH-quinone oxidoreductase subunit H;
n=10; Bacillus cereus group|Rep: NADH-quinone
oxidoreductase subunit H - Bacillus anthracis
Length = 333
Score = 121 bits (292), Expect = 2e-26
Identities = 71/210 (33%), Positives = 102/210 (48%), Gaps = 3/210 (1%)
Frame = +3
Query: 72 LLERKVLGYIQIRKGPNKVGF-IGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFI 248
L ERKV+G++Q R GPN+VG GLLQ +D +KL KE + P ++ + +PV F
Sbjct: 38 LAERKVMGFMQGRIGPNQVGGRFGLLQTVADVLKLLLKEDSIPKAADKPLFILAPVIAFA 97
Query: 249 XXXXXXXXIPYI--FNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVAQ 422
IP+ F +G+L+++ ++ + V+ GW+SN+ Y+LLGG+R+ AQ
Sbjct: 98 PAFMVLAVIPFTDKFQFADIGVGLLYYIAVSGITTIGVVTGGWASNNKYSLLGGMRAAAQ 157
Query: 423 TISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNRTPF 602
ISYE+ QE AE NRTPF
Sbjct: 158 MISYEIPLVMSVIGIVLLAGSLNLNEIVAAQENVWYIFVQPIGFVVFLIAAVAELNRTPF 217
Query: 603 DFAEGERELVSGFNIEYRRGGFALIFLAEY 692
D E E ELVSG++ EY +A L+EY
Sbjct: 218 DLPEAESELVSGYHTEYSGFRWAFFMLSEY 247
>UniRef50_Q5YWD4 Cluster: NADH-quinone oxidoreductase subunits H/I;
n=65; Bacteria|Rep: NADH-quinone oxidoreductase subunits
H/I - Nocardia farcinica
Length = 597
Score = 121 bits (292), Expect = 2e-26
Identities = 77/218 (35%), Positives = 98/218 (44%), Gaps = 11/218 (5%)
Frame = +3
Query: 72 LLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFIX 251
L ERKV+ +Q+R GPN+VG G LQ +D +K+ KE P + Y +PV I
Sbjct: 35 LAERKVVARMQMRVGPNRVGPFGSLQSIADGVKMAFKEDLVPAIVDKPIYLLAPVVSVIP 94
Query: 252 XXXXXXXIPY-----------IFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALL 398
IP L +G+L+ L +TS+GVY +++AGW+S S Y LL
Sbjct: 95 AFMAFAVIPLGGEVSVAGNTTALQLTDMPVGVLYILAITSIGVYGIVLAGWASGSTYPLL 154
Query: 399 GGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXX 578
GGLRS AQ ISYE+ Q
Sbjct: 155 GGLRSTAQVISYEIAMALCFAAVFLHAGTMATSGIVGAQHPTWFVFLLLPSFLIYCVSMV 214
Query: 579 AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEY 692
ETNR PFD E E ELV GF+ EY FA+ LAEY
Sbjct: 215 GETNRAPFDLPEAEGELVGGFHTEYSSLKFAMFMLAEY 252
>UniRef50_P48901 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=3; Saccharomycetales|Rep: NADH-ubiquinone
oxidoreductase chain 1 - Pichia canadensis (Yeast)
(Hansenula wingei)
Length = 351
Score = 121 bits (291), Expect = 2e-26
Identities = 74/217 (34%), Positives = 100/217 (46%), Gaps = 2/217 (0%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
A+LT+ ERK LGY+Q R GPN VG+ G L +DA+KL KE S+ SP+
Sbjct: 21 AYLTVAERKTLGYMQRRVGPNIVGYYGQLMAIADALKLLLKEIIIVRESDKILIIISPII 80
Query: 240 RFIXXXXXXXXIPYIFNLIC--FNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRS 413
IP+ + N +L+ L + S+GV+ ++ GWSSNS + LL +RS
Sbjct: 81 ALCFALLSWAVIPFSPGIAIGDMNYSLLYILVIGSIGVFGTLLVGWSSNSKFTLLASIRS 140
Query: 414 VAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNR 593
AQ ISYE+ F Q+ AET+R
Sbjct: 141 TAQLISYELILTTNIIICILLNNTLNLNSFIDNQQTIWLILPLLPIGIIHYIARIAETSR 200
Query: 594 TPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSIL 704
PFD E E ELVSG E F L +L EY++I+
Sbjct: 201 PPFDNVEAESELVSGHMTELSASPFVLFYLQEYNNIV 237
>UniRef50_Q1IS58 Cluster: NADH-quinone oxidoreductase subunit H 1;
n=7; cellular organisms|Rep: NADH-quinone oxidoreductase
subunit H 1 - Acidobacteria bacterium (strain Ellin345)
Length = 426
Score = 120 bits (290), Expect = 3e-26
Identities = 61/127 (48%), Positives = 85/127 (66%), Gaps = 2/127 (1%)
Frame = +3
Query: 66 LTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRF 245
+T LERKVL ++QIR GP +VG GLLQP +DA+KL KE P+ ++ F ++ +PV
Sbjct: 42 MTYLERKVLAHMQIRLGPMRVGPHGLLQPIADALKLLIKEDIVPDGADKFLFWMAPVTVM 101
Query: 246 IXXXXXXXXIPY--IFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVA 419
+ IP+ + N+G+LF + ++SLGV V++AGWSSNS YAL+GGLRS A
Sbjct: 102 MTAFTTYLVIPFGRSHAVTDMNIGVLFMIGISSLGVLAVVMAGWSSNSKYALMGGLRSAA 161
Query: 420 QTISYEV 440
Q +SYEV
Sbjct: 162 QMVSYEV 168
Score = 47.6 bits (108), Expect = 3e-04
Identities = 21/42 (50%), Positives = 28/42 (66%)
Frame = +3
Query: 579 AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSIL 704
AETNR PFD E E EL +GF+ EY ++L FL EY +++
Sbjct: 227 AETNRAPFDLPEAESELTAGFHTEYSGFRWSLFFLGEYVAMI 268
>UniRef50_UPI00015BD35D Cluster: UPI00015BD35D related cluster; n=2;
unknown|Rep: UPI00015BD35D UniRef100 entry - unknown
Length = 348
Score = 120 bits (289), Expect = 4e-26
Identities = 79/224 (35%), Positives = 103/224 (45%), Gaps = 13/224 (5%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
A+LTL+ERKV +IQ R GP VG+ GLLQP +D IKL TKE P+ +N Y + +
Sbjct: 26 AYLTLVERKVAAHIQRRPGPMVVGWHGLLQPLADGIKLLTKEDILPSSANQVLYNLAIIM 85
Query: 240 RFIXXXXXXXXIPY-----IFN------LICFNLGILFFLCLTSLGVYIVIIAGWSSNSN 386
+ +P+ +F L N+GI+ SL VY V ++GW+SNS
Sbjct: 86 ALVPASLVFAVVPFGPEIHVFGYDIKPILTDVNIGIIMAFAFGSLAVYGVALSGWASNSK 145
Query: 387 YALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQ--EXXXXXXXXXXXXXX 560
YAL+G LR ISYEV Y + Q +
Sbjct: 146 YALIGALRKAGIIISYEVVITFAALGPIMLAKSLSTYDIVMAQIHQKVWYIFLQPISFVV 205
Query: 561 XXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEY 692
AET R PFD E E ELV+GF +EY F L L E+
Sbjct: 206 FVFALLAETGRVPFDIQEAEAELVTGFTVEYGGMKFGLFPLVEW 249
>UniRef50_Q7YH66 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=302; Platyhelminthes|Rep: NADH-ubiquinone
oxidoreductase chain 1 - Taenia asiatica (Asian
tapeworm)
Length = 303
Score = 119 bits (287), Expect = 6e-26
Identities = 74/211 (35%), Positives = 96/211 (45%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
AF L ERK+LGY Q RKGPNKVG IGLLQ FSD +KL K + Y S + F V
Sbjct: 21 AFFILGERKILGYSQFRKGPNKVGIIGLLQSFSDLLKLIVKFKNYGFQSRSWVGLFGVVL 80
Query: 240 RFIXXXXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVA 419
++ +L +L+FL +TS Y ++ GW S ++Y+ L +R
Sbjct: 81 LVGLVIYYSFVYGGYYSYSFNSLSLLWFLVITSFCSYSILCTGWGSYNSYSFLSSIRCAF 140
Query: 420 QTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNRTP 599
+IS+E F+L ETNRTP
Sbjct: 141 GSISFEACFMCIIIFSALCYCSYSLVDFFL--SGWLSVVIFPCLLILYIICILCETNRTP 198
Query: 600 FDFAEGERELVSGFNIEYRRGGFALIFLAEY 692
FD+ E E ELVSGFN+EY F +F EY
Sbjct: 199 FDYGEAESELVSGFNVEYSGIYFTCLFACEY 229
>UniRef50_Q6TY88 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=1; Xiphinema americanum|Rep: NADH-ubiquinone
oxidoreductase chain 1 - Xiphinema americanum
Length = 289
Score = 119 bits (287), Expect = 6e-26
Identities = 79/217 (36%), Positives = 103/217 (47%), Gaps = 1/217 (0%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
AF TLLERK+LG+ QIR GPNK+ F GLLQP D +KL TK P + + P+
Sbjct: 20 AFFTLLERKLLGFSQIRVGPNKLAFSGLLQPVMDGLKLLTKNMYMPVITQ-MLLFIGPII 78
Query: 240 RF-IXXXXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSV 416
F + +P+ N + +L FL L Y V+I GW S ++ LG LR++
Sbjct: 79 SFMVFMIFWVLVLPWNGNFMFRCSALLMFLML-GFSAYSVVIMGWGITSMFSKLGSLRAM 137
Query: 417 AQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNRT 596
Q++S+EV F E E+NR
Sbjct: 138 LQSLSFEVSLILAFFMTLIHMNSVNLSNFLTCFE------PSITWVFMWIILCLMESNRA 191
Query: 597 PFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILF 707
PFD EGE EL+SGFNIE F L+FL+EY ILF
Sbjct: 192 PFDLLEGESELISGFNIEMSSVLFVLVFLSEY-GILF 227
>UniRef50_Q1K3R5 Cluster: Respiratory-chain NADH dehydrogenase,
subunit 1; n=1; Desulfuromonas acetoxidans DSM 684|Rep:
Respiratory-chain NADH dehydrogenase, subunit 1 -
Desulfuromonas acetoxidans DSM 684
Length = 329
Score = 118 bits (285), Expect = 1e-25
Identities = 68/212 (32%), Positives = 100/212 (47%), Gaps = 3/212 (1%)
Frame = +3
Query: 75 LERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFIXX 254
+ERK+ G+ Q R GP +VGF G+LQ D KL K+ P ++ + +P+ F+
Sbjct: 35 MERKLAGHFQRRPGPMEVGFHGILQLLVDGFKLMGKQLVVPAQADKKLFILAPMLSFVPV 94
Query: 255 XXXXXXIPYIFNLICFNL--GILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVAQTI 428
IP+ + F+L G+LF L + S+ V V++ GW SN+ Y+L G RSVAQ +
Sbjct: 95 FLPLLVIPFSDKIQAFDLDVGLLFILAVASINVLAVLVGGWGSNNKYSLFGAFRSVAQNV 154
Query: 429 SYEVRXXXXXXXXXXXXXXXXXYFFYLYQE-XXXXXXXXXXXXXXXXXXXXAETNRTPFD 605
+YE+ Q AETNR PFD
Sbjct: 155 AYEIPMLIALLSVVFVTNTFSLKGIVAAQSGGSWFLFFQPLAFLIYIICMVAETNRAPFD 214
Query: 606 FAEGERELVSGFNIEYRRGGFALIFLAEYSSI 701
E E EL +GF+ EY F+L +AEY+++
Sbjct: 215 LPEAESELTAGFHTEYSGMSFSLFMMAEYTNM 246
>UniRef50_O79868 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=2; Chlamydomonadales|Rep: NADH-ubiquinone
oxidoreductase chain 1 - Chlorogonium elongatum
Length = 296
Score = 118 bits (284), Expect = 1e-25
Identities = 78/215 (36%), Positives = 104/215 (48%), Gaps = 1/215 (0%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
AF TL ER+V+ +Q R GPN GF G+LQ D KL KE P S + +P+
Sbjct: 18 AFFTLAERQVMASMQRRVGPNVSGFSGVLQAIYDGAKLGVKEPILPELSASGAFTAAPMI 77
Query: 240 RFIXXXXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVA 419
FI + + F G++ + L+SLGVY V++AGW+SNS YA LG LRSVA
Sbjct: 78 GFIISQISFCGL--FISDAAFQ-GLVL-MALSSLGVYGVMLAGWASNSKYAFLGCLRSVA 133
Query: 420 QTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQE-XXXXXXXXXXXXXXXXXXXXAETNRT 596
+SYE+ + + AET R
Sbjct: 134 LMVSYELGFGAVLLSISLFLVDNSGMKSLNFGDASTNISFALLPLFFIFLVCILAETKRV 193
Query: 597 PFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSI 701
PFD E E ELV+G+N+EY GFAL F+ EY+S+
Sbjct: 194 PFDLPEAEAELVAGYNVEYSSLGFALFFIGEYASM 228
>UniRef50_A3THI6 Cluster: NADH dehydrogenase subunit H; n=2;
cellular organisms|Rep: NADH dehydrogenase subunit H -
Janibacter sp. HTCC2649
Length = 487
Score = 116 bits (280), Expect = 4e-25
Identities = 73/216 (33%), Positives = 97/216 (44%), Gaps = 11/216 (5%)
Frame = +3
Query: 78 ERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFIXXX 257
ER+V+G +Q R GPN+ G GLLQ +D +K KE P ++ F + +P+
Sbjct: 74 ERRVIGRMQQRPGPNRNGPFGLLQTLADGMKAMLKEDVTPAKADRFVFTLAPLITATMCF 133
Query: 258 XXXXXIPYIFNLICF-----------NLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGG 404
IP + F ++ +LF L + +G+Y V++AGWSS S Y L+GG
Sbjct: 134 IGFAIIPLGGEVTMFGHTTPLQLADSSISVLFVLAIAGIGIYGVVLAGWSSGSPYPLMGG 193
Query: 405 LRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAE 584
LRS AQ ISYE+ Q E
Sbjct: 194 LRSSAQMISYEIAMGLSLVAVFLYSGSMSTSQIVSSQHSIWYIIPAFFSFFVYVITMVGE 253
Query: 585 TNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEY 692
TNR PFD AEGE EL GF+ EY FA+ FL EY
Sbjct: 254 TNRLPFDLAEGEGELTGGFHTEYGSMRFAMFFLGEY 289
>UniRef50_Q9T9L2 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=1; Dicyema misakiense|Rep: NADH-ubiquinone
oxidoreductase chain 1 - Dicyema misakiense
Length = 271
Score = 116 bits (280), Expect = 4e-25
Identities = 79/215 (36%), Positives = 103/215 (47%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
AFLTLLERKV+GYI R GPNK+ IG+LQP D +KLF K S +
Sbjct: 8 AFLTLLERKVMGYIHGRVGPNKILLIGVLQPIVDGVKLFLKSHMIS--VKVLPSVLSLIV 65
Query: 240 RFIXXXXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVA 419
+ Y+ +L +L + SL V+ ++IA WSS S+Y +L LR VA
Sbjct: 66 PLLLLCVLDVNSSYM---------LLMYLAVLSLSVWPLLIASWSSYSSYPVLASLRIVA 116
Query: 420 QTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNRTP 599
Q+ISYEV + +E +RTP
Sbjct: 117 QSISYEVVLYLIFIPLVVLSVSWSG-----FAPTYSCGIYCVSFVFLGVIVGLSEMHRTP 171
Query: 600 FDFAEGERELVSGFNIEYRRGGFALIFLAEYSSIL 704
FDFAEGE ELVSG+N E+ F L+FLAEY ++L
Sbjct: 172 FDFAEGESELVSGYNTEFSSVSFTLLFLAEYLALL 206
>UniRef50_Q9EV66 Cluster: NADH-quinone oxidoreductase subunit H 2;
n=4; Proteobacteria|Rep: NADH-quinone oxidoreductase
subunit H 2 - Rhizobium meliloti (Sinorhizobium
meliloti)
Length = 328
Score = 116 bits (280), Expect = 4e-25
Identities = 76/220 (34%), Positives = 102/220 (46%), Gaps = 11/220 (5%)
Frame = +3
Query: 66 LTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRF 245
LT LERK+ G++Q R GP +VG+ GLLQP +D IKL TKE P ++ F + +P+
Sbjct: 28 LTWLERKIAGHMQQRMGPMRVGWHGLLQPVADGIKLLTKEDHIPAEADRFLFKLAPILAL 87
Query: 246 IXXXXXXXXIPY------IFNLIC-----FNLGILFFLCLTSLGVYIVIIAGWSSNSNYA 392
IP+ + N I N+ +LF + L VY VI GW++NS YA
Sbjct: 88 APPFVVFAAIPFGESVSVLGNEITLYISNLNVALLFVFAVIGLEVYGVIFGGWAANSKYA 147
Query: 393 LLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXX 572
+LG LR+ AQ ISYE+ Q
Sbjct: 148 VLGSLRTCAQMISYEIPMGFAVIGVVMLAQSMSLLDIVRAQTDVWNVVYQPIGFFVFFVA 207
Query: 573 XXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEY 692
AE R PFD AE E +L +GF+ EY FAL ++EY
Sbjct: 208 GLAEAQRIPFDLAEAEGDLGAGFHTEYSGIRFALFMVSEY 247
>UniRef50_Q5DKX5 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=3; Pseudococcidae|Rep: NADH-ubiquinone oxidoreductase
chain 1 - Maconellicoccus hirsutus (hibiscus mealybug)
Length = 306
Score = 116 bits (279), Expect = 6e-25
Identities = 70/215 (32%), Positives = 92/215 (42%)
Frame = +3
Query: 63 FLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFR 242
F LLERKVLGY+ R GPNK+ F GL Q D +KL KE ++ N+F Y F F
Sbjct: 18 FFILLERKVLGYLNNRLGPNKILFKGLFQFLMDLVKLIFKENSFMILMNFFMYNFMIFFF 77
Query: 243 FIXXXXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVAQ 422
FI +PY+ NLI IL L + + I++ WS NS Y+ + +R Q
Sbjct: 78 FIISFFIWLILPYLINLINLGFMILIMLMIMVNKILILMNLIWSINSIYSTISLIRLFIQ 137
Query: 423 TISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNRTPF 602
S+E+ E NR PF
Sbjct: 138 NFSFEILFMMILFFYMFLYNNLNMLMIMKMVYLNKMIYFSLLIFYFWLISIMVELNRIPF 197
Query: 603 DFAEGERELVSGFNIEYRRGGFALIFLAEYSSILF 707
DF E E EL+SG N+E+ F FL EY ++F
Sbjct: 198 DFLESESELISGMNLEFSSLNFMFFFLIEYLDLIF 232
>UniRef50_Q0Z876 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=2; Mermithidae|Rep: NADH-ubiquinone oxidoreductase
chain 1 - Agamermis sp. BH-2006
Length = 310
Score = 116 bits (279), Expect = 6e-25
Identities = 75/216 (34%), Positives = 105/216 (48%), Gaps = 1/216 (0%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
AF TL ERK L Y Q+R GPNK+ F GL QPF D +KLF K+ + N N++ Y F
Sbjct: 34 AFFTLTERKFLSYSQLRLGPNKMFFNGLFQPFLDGVKLF-KKNSLINLKNHYILYKIMSF 92
Query: 240 RFIXXXXXXXXIPYIFNLICFNLGI-LFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSV 416
I I F+ + + LF + + + Y++++ GWSS +NY+L+GG RS+
Sbjct: 93 -MILLVSLIMWIMIPFSSWSNKIMLPLFIILMFGISSYMMLLLGWSSMNNYSLMGGSRSL 151
Query: 417 AQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNRT 596
AQ +S+E+ E +R
Sbjct: 152 AQVLSFEMLITLLVLITFVLKSSMSLKIL-----DYKSPMLFFFILICFSISIILEAHRA 206
Query: 597 PFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSIL 704
P D AEGE ELVSG+N E+ F LIFL+EYSS++
Sbjct: 207 PLDLAEGESELVSGYNTEFSSLYFILIFLSEYSSLI 242
>UniRef50_A4G637 Cluster: NADH-quinone oxidoreductase subunit H;
n=63; cellular organisms|Rep: NADH-quinone
oxidoreductase subunit H - Herminiimonas arsenicoxydans
Length = 357
Score = 116 bits (279), Expect = 6e-25
Identities = 59/129 (45%), Positives = 81/129 (62%), Gaps = 2/129 (1%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
A+LTL ERKV+G++ +R GPN+ G GLLQP +DA+KL KE P S+ + +P+
Sbjct: 41 AYLTLWERKVIGWMHVRHGPNRTGPAGLLQPIADALKLLLKEIVVPAKSSKALFVIAPIM 100
Query: 240 RFIXXXXXXXXIPY--IFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRS 413
+ IP+ L N G+LF + +TSL VY VI+AGW+SNS YA LG +R+
Sbjct: 101 TIMPALAAWAVIPFGPEAALANVNAGLLFVMAITSLEVYGVIVAGWASNSKYAFLGAMRA 160
Query: 414 VAQTISYEV 440
AQ ISYE+
Sbjct: 161 SAQMISYEI 169
Score = 51.2 bits (117), Expect = 2e-05
Identities = 22/42 (52%), Positives = 30/42 (71%)
Frame = +3
Query: 579 AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSIL 704
AE NR PFD EGE E+V+G +EY FA+ FLAEY++++
Sbjct: 227 AELNRHPFDVVEGESEIVAGHMVEYSGMSFAMFFLAEYANMI 268
>UniRef50_Q1IS40 Cluster: NADH-quinone oxidoreductase subunit H 2;
n=9; Bacteria|Rep: NADH-quinone oxidoreductase subunit H
2 - Acidobacteria bacterium (strain Ellin345)
Length = 354
Score = 115 bits (277), Expect = 1e-24
Identities = 79/241 (32%), Positives = 109/241 (45%), Gaps = 26/241 (10%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
A+ LERKV+G +Q R GP +VG GLLQP +D +K KE P N Y +P+
Sbjct: 27 AYTVWLERKVVGRMQNRWGPTRVGPFGLLQPLADGLKFILKEDLLPPHVNKPLYILAPML 86
Query: 240 RFIXXXXXXXXIPYIFNL---------------------ICFNLGILFFLCLTSLGVYIV 356
+P+ L + N+G+L L +TS+GVY +
Sbjct: 87 AVAMALLSISIVPFGGTLTIGHITTPLQITGIMGANGQPVDINIGLLIILGVTSIGVYGI 146
Query: 357 IIAGWSSNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQE-----X 521
+AGWSSNS Y+LLG LR+ AQ +SYEV Q+
Sbjct: 147 ALAGWSSNSKYSLLGSLRASAQMVSYEVSLGLSLVGVLLLSGSFSLREIVRLQQGGFWNW 206
Query: 522 XXXXXXXXXXXXXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSI 701
AETNR PFD E E ELV+G++ EY FA+ F+AEY+++
Sbjct: 207 NIFGGFQFIAFFIYLTSAYAETNRIPFDLPEAETELVAGYHTEYSSMKFAMFFMAEYANM 266
Query: 702 L 704
+
Sbjct: 267 V 267
>UniRef50_Q67KP0 Cluster: NADH-quinone oxidoreductase subunit H 2;
n=1; Symbiobacterium thermophilum|Rep: NADH-quinone
oxidoreductase subunit H 2 - Symbiobacterium
thermophilum
Length = 394
Score = 115 bits (276), Expect = 1e-24
Identities = 71/213 (33%), Positives = 99/213 (46%), Gaps = 6/213 (2%)
Frame = +3
Query: 72 LLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFIX 251
+LERK+ ++Q R GP +VG G +QP +D IKL+ KE PN + + Y +P F+
Sbjct: 38 MLERKLSAWMQNRVGPWRVGLWGWIQPVADLIKLWVKEYIRPNNVDKWLYLIAPFIGFVS 97
Query: 252 XXXXXXXIPYIFNLIC--FNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVAQT 425
+P+ LI F +GI+F + V +AGW SN+ Y++LG +R AQ
Sbjct: 98 ANLVWLIVPFGDKLIATDFEIGIIFIAAVMGYDVIATFMAGWGSNNKYSMLGAMRGAAQL 157
Query: 426 ISYEVRXXXXXXXXXXXXXXXXXYFFYLYQE----XXXXXXXXXXXXXXXXXXXXAETNR 593
ISYEV L Q+ AE NR
Sbjct: 158 ISYEVTMVMAVIGVVMMAGSLRLSDIVLAQQQRGFLGWFLFPQIIGFIVYLIASLAELNR 217
Query: 594 TPFDFAEGERELVSGFNIEYRRGGFALIFLAEY 692
PFD AE E+ELV+G + EY +A+ LAEY
Sbjct: 218 APFDLAEAEQELVAGHHTEYSGFRWAMFMLAEY 250
>UniRef50_A6H1Q6 Cluster: NADH-quinone oxidoreductase subunit H;
n=4; Bacteroidetes|Rep: NADH-quinone oxidoreductase
subunit H - Flavobacterium psychrophilum (strain
JIP02/86 / ATCC 49511)
Length = 343
Score = 114 bits (274), Expect = 2e-24
Identities = 71/225 (31%), Positives = 101/225 (44%), Gaps = 12/225 (5%)
Frame = +3
Query: 63 FLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFR 242
+ T ERKV ++Q R GPN+ G+ GLLQP +D +KLF+KE PN N F + P
Sbjct: 26 YSTWAERKVAAFLQDRVGPNRAGWGGLLQPLADGLKLFSKEEFEPNTPNKFLFVVGPAIA 85
Query: 243 FIXXXXXXXXIPYIFNLICFNLGI-----------LFFLCLTSLGVYIVIIAGWSSNSNY 389
IP+ L F I L+ + S+GVY ++I GW+SN+ +
Sbjct: 86 MSTALMTSAVIPWGDKLHLFGRDILLQATDIDNALLYIFAVVSVGVYGIMIGGWASNNKF 145
Query: 390 ALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQE-XXXXXXXXXXXXXXXX 566
+L+G +R+ +Q +SYEV Q
Sbjct: 146 SLMGAVRAASQMVSYEVAMGLSMIALLMMTGTLSLKEISAQQSGMNWNVFYQPVSFLIFL 205
Query: 567 XXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSI 701
AETNRTPFD AE E EL+ G++ EY AEY+++
Sbjct: 206 ICAFAETNRTPFDLAECESELIGGYHTEYSSMKMGFYLFAEYANM 250
>UniRef50_Q1HBD8 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=1; Thaumamermis cosgrovei|Rep: NADH-ubiquinone
oxidoreductase chain 1 - Thaumamermis cosgrovei
Length = 293
Score = 113 bits (272), Expect = 4e-24
Identities = 77/217 (35%), Positives = 104/217 (47%), Gaps = 2/217 (0%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
AF TLLERK LG Q+R GPNKV F G +QP D IKL K+ N Y YF F
Sbjct: 25 AFFTLLERKFLGSTQLRFGPNKVSFWGWIQPILDGIKLL-KKTNILNLKIYTTIYFFMSF 83
Query: 240 RFIXXXXXXXXIP--YIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRS 413
+ + Y++NL L +++ L + L +++++ GWSS S +ALLG RS
Sbjct: 84 AILILALLIWAVMPFYLWNLKM--LVLMWILMVLGLSAFMILMIGWSSLSKFALLGSNRS 141
Query: 414 VAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNR 593
++Q +S+EV Y +L E R
Sbjct: 142 ISQVLSFEVN-FTMLIFLPFVMKCSMTYASFLSMS------LNFLTILLTGLTLVMEVQR 194
Query: 594 TPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSIL 704
P D +EGE ELVSG+N EY F IFLAEYS+++
Sbjct: 195 APADLSEGESELVSGYNTEYSSVLFTSIFLAEYSNMM 231
>UniRef50_Q8KEB9 Cluster: NADH-quinone oxidoreductase subunit H;
n=10; Chlorobiaceae|Rep: NADH-quinone oxidoreductase
subunit H - Chlorobium tepidum
Length = 359
Score = 112 bits (269), Expect = 9e-24
Identities = 71/218 (32%), Positives = 101/218 (46%), Gaps = 10/218 (4%)
Frame = +3
Query: 78 ERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFIXXX 257
ERK+ ++Q R GP +VGF GLLQ +D +KL KE P ++ F + P F+
Sbjct: 49 ERKISAFMQDRLGPMEVGFWGLLQTLADILKLLQKEDIVPTVADKFLFVIGPGILFVGSF 108
Query: 258 XXXXXIPY--IFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVAQTIS 431
+P+ F N+G+ + + + ++ V ++ AGW SN+ +AL G +RSVAQ +S
Sbjct: 109 LAFAVLPFGPAFIGADLNVGLFYAVGIVAIEVVGILAAGWGSNNKWALYGAVRSVAQIVS 168
Query: 432 YEVRXXXXXXXXXXXXXXXXXYFFYLYQE--------XXXXXXXXXXXXXXXXXXXXAET 587
YE+ L Q AET
Sbjct: 169 YEIPASIALLCAAMLAGTLSMQQIILMQAGPNGFLHWFLFTNPIAWLPFLIYFISSLAET 228
Query: 588 NRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSI 701
NR PFD E E ELV+G+ EY FA+IFLAEY S+
Sbjct: 229 NRAPFDIPEAESELVAGYFTEYSGMKFAVIFLAEYGSM 266
>UniRef50_P11658 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=4; Eukaryota|Rep: NADH-ubiquinone oxidoreductase chain
1 - Chlamydomonas reinhardtii
Length = 292
Score = 111 bits (268), Expect = 1e-23
Identities = 77/215 (35%), Positives = 104/215 (48%), Gaps = 1/215 (0%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
A TL ER V+ +Q R GP G GLLQPF D +KL KE P+ S+ + SP+
Sbjct: 18 AMFTLAERTVMASMQRRFGPQVSGISGLLQPFWDGLKLGVKEPVLPDSSSAGAFAASPMI 77
Query: 240 RFIXXXXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVA 419
F+ I + F G++ + ++SL VY V++AGW+SNS YA LG LRSVA
Sbjct: 78 SFVLSQVAWVGI--CISDASFQ-GLVI-MAISSLAVYGVMLAGWASNSKYAFLGCLRSVA 133
Query: 420 QTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQE-XXXXXXXXXXXXXXXXXXXXAETNRT 596
+SYE+ + E AET R
Sbjct: 134 LMVSYELSLGAALLSIGLFVTDGTGMKCLNFAEMPTTPQYAMLPLCLIFLVCILAETKRD 193
Query: 597 PFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSI 701
PFD E ELV+G+N+EY GFAL F+AEY+++
Sbjct: 194 PFDLPEA--ELVAGYNVEYSSLGFALFFIAEYANM 226
>UniRef50_A0RMD5 Cluster: NAD(P)H-quinone oxidoreductase chain 1
(NAD(P)Hdehydrogenase I, chain 1); n=1; Campylobacter
fetus subsp. fetus 82-40|Rep: NAD(P)H-quinone
oxidoreductase chain 1 (NAD(P)Hdehydrogenase I, chain 1)
- Campylobacter fetus subsp. fetus (strain 82-40)
Length = 425
Score = 111 bits (267), Expect = 2e-23
Identities = 74/232 (31%), Positives = 113/232 (48%), Gaps = 23/232 (9%)
Frame = +3
Query: 66 LTLLERKVLGYIQIRKGPNKVGFIGL-----LQPFSDAIKLFTKERTYPN-FSNYFCYYF 227
L LLERK+ +IQ R GPN+ G+ +Q +DA+KL KE P+ + F +
Sbjct: 25 LVLLERKISAFIQDRPGPNRANIAGIRLGGIIQALADALKLAIKEDFTPSSIRSKFLFTI 84
Query: 228 SPVFRFIXXXXXXXXIPY-----------IFNLICFNLGILFFLCLTSLGVYIVIIAGWS 374
+P+ F+ IP+ + I F+ G+L++L + SL +Y +++AG++
Sbjct: 85 APMILFLMSTLTIAVIPFSDYFTIDGVKHLMQGIPFDGGMLWYLGVASLSIYGIMLAGYA 144
Query: 375 SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQE------XXXXXX 536
SN+ Y+LLG LR+ + ISYE+ F L Q+
Sbjct: 145 SNNKYSLLGSLRAASGAISYEIPLGLAVVSMILTYDSINLNDFVLQQQGSFLGLPSWGIF 204
Query: 537 XXXXXXXXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEY 692
AETNR PFD AEGE E+V+G+++EY FA+ F+AEY
Sbjct: 205 IQPLAAIIFIICAFAETNRAPFDLAEGESEIVAGYHLEYSAMSFAMFFMAEY 256
>UniRef50_P42032 Cluster: NADH-quinone oxidoreductase subunit H;
n=6; Rhodobacterales|Rep: NADH-quinone oxidoreductase
subunit H - Rhodobacter capsulatus (Rhodopseudomonas
capsulata)
Length = 345
Score = 111 bits (267), Expect = 2e-23
Identities = 71/215 (33%), Positives = 95/215 (44%), Gaps = 7/215 (3%)
Frame = +3
Query: 78 ERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFIXXX 257
+RK+ +Q+RKGPN VG GLLQ +DA K KE P + Y+ +P+ +
Sbjct: 37 DRKIWAAVQMRKGPNVVGAFGLLQSVADAAKYVFKEIVVPAGVDKPVYFLAPMLSLVLAL 96
Query: 258 XXXXXIPYIFNLIC--FNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVAQTIS 431
+P+ + N+ +LF ++SL VY VI+ GW+SNS Y LG LRS AQ IS
Sbjct: 97 LAWVVVPFNEGWVMADINVAVLFVFAVSSLEVYGVIMGGWASNSKYPFLGSLRSAAQMIS 156
Query: 432 YEVRXXXXXXXXXXXXXXXXXYFFYLYQE-----XXXXXXXXXXXXXXXXXXXXAETNRT 596
YEV Q AETNR
Sbjct: 157 YEVSMGLIIVGVIISTGSMNLSAIVEAQRGDFGLLNWYWLPHLPMVALFFISALAETNRP 216
Query: 597 PFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSI 701
PFD E E ELV+GF +EY + L EY ++
Sbjct: 217 PFDLPEAESELVAGFMVEYSSTPYLLFMAGEYIAV 251
>UniRef50_Q8A0F7 Cluster: NADH-quinone oxidoreductase subunit H;
n=7; Bacteroidetes|Rep: NADH-quinone oxidoreductase
subunit H - Bacteroides thetaiotaomicron
Length = 358
Score = 109 bits (262), Expect = 7e-23
Identities = 68/218 (31%), Positives = 99/218 (45%), Gaps = 6/218 (2%)
Frame = +3
Query: 66 LTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRF 245
L +ERKV G+ Q R GPN+VG G +Q D +K+ TKE P ++ F Y +P
Sbjct: 47 LIYMERKVCGFFQCRLGPNRVGKWGSIQVICDVLKMLTKEIFTPKDADRFLYNLAPFMVI 106
Query: 246 IXXXXXXXXIPYI--FNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVA 419
I IP+ ++ FN+G+ F L +S+GV +++AGW SN+ ++L+G +RS A
Sbjct: 107 IASFLTFACIPFNKGAEILNFNVGVFFLLAASSIGVVGILLAGWGSNNKFSLIGAMRSGA 166
Query: 420 QTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETN--- 590
Q ISYE+ Q N
Sbjct: 167 QIISYELSVGMSIMTMVVLMGTMQFSEIVEGQADGWFIFKGHIPAVIAFIIYLIAGNAEC 226
Query: 591 -RTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSI 701
R PFD E E EL +G++ EY F +LAEY ++
Sbjct: 227 NRGPFDLPEAESELTAGYHTEYSGMHFGFFYLAEYLNL 264
>UniRef50_Q02CT6 Cluster: NADH-quinone oxidoreductase subunit H 1;
n=1; Solibacter usitatus Ellin6076|Rep: NADH-quinone
oxidoreductase subunit H 1 - Solibacter usitatus (strain
Ellin6076)
Length = 397
Score = 109 bits (262), Expect = 7e-23
Identities = 58/138 (42%), Positives = 81/138 (58%), Gaps = 11/138 (7%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
A+L +ERKV+ +IQ+R GP +VG GLLQP +D IKL TKE P + N Y +P
Sbjct: 27 AYLQWVERKVIAHIQVRPGPYRVGPHGLLQPLADVIKLITKEDLVPPYVNKPLYLAAPFL 86
Query: 240 RFIXXXXXXXXIPY-----------IFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSN 386
IP+ + N+G+LF L ++S+GVY + +AGW+SN+
Sbjct: 87 AITMALLSISVIPFGPVIHIGPVTTAMQMTDLNIGVLFILAVSSMGVYGIALAGWASNNK 146
Query: 387 YALLGGLRSVAQTISYEV 440
Y+L+GGLRS AQ ISYE+
Sbjct: 147 YSLIGGLRSSAQMISYEL 164
Score = 52.8 bits (121), Expect = 8e-06
Identities = 23/42 (54%), Positives = 30/42 (71%)
Frame = +3
Query: 579 AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSIL 704
AETNR PFD E E ELV+GF+ EY FA F+AEY++++
Sbjct: 218 AETNRVPFDLPEAENELVAGFHTEYSSMKFASFFMAEYANMI 259
>UniRef50_Q9A6Y1 Cluster: NADH-quinone oxidoreductase subunit H;
n=194; cellular organisms|Rep: NADH-quinone
oxidoreductase subunit H - Caulobacter crescentus
(Caulobacter vibrioides)
Length = 356
Score = 108 bits (260), Expect = 1e-22
Identities = 56/129 (43%), Positives = 76/129 (58%), Gaps = 2/129 (1%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
AFL L +RK+ +Q+RKGPN VG GLLQ F+D K KE P ++ + +P+
Sbjct: 32 AFLLLADRKIWAGVQMRKGPNVVGPFGLLQSFADFFKFVLKEIVIPAGADKVVFILAPLI 91
Query: 240 RFIXXXXXXXXIPYIFNLICFNL--GILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRS 413
I +P+ + NL GIL+ L ++SLGVY +I+ GW+SNS Y LG LRS
Sbjct: 92 SLILAFVGWAVVPFAPGWVVSNLNVGILYLLAMSSLGVYGIIMGGWASNSKYPFLGALRS 151
Query: 414 VAQTISYEV 440
AQ +SYEV
Sbjct: 152 AAQMVSYEV 160
Score = 50.8 bits (116), Expect = 3e-05
Identities = 22/42 (52%), Positives = 29/42 (69%)
Frame = +3
Query: 579 AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSIL 704
AETNR PFD E E ELV+G+ +EY + L +AEYS+I+
Sbjct: 221 AETNRPPFDLPEAESELVAGYQVEYSSTPYLLFMVAEYSNIV 262
>UniRef50_O67336 Cluster: NADH-quinone oxidoreductase subunit H;
n=3; Aquificaceae|Rep: NADH-quinone oxidoreductase
subunit H - Aquifex aeolicus
Length = 336
Score = 108 bits (259), Expect = 2e-22
Identities = 76/224 (33%), Positives = 99/224 (44%), Gaps = 13/224 (5%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
A+LT ERK+ G+IQ R GP VG G+LQP +DA+KL TKE P ++ YY + V
Sbjct: 27 AYLTWFERKLAGHIQNRLGPTVVGKFGILQPLADALKLATKEVIIPRGADKPVYYAAVVM 86
Query: 240 RFIXXXXXXXXIP----------YIFNLIC-FNLGILFFLCLTSLGVYIVIIAGWSSNSN 386
+ IP YI +I N+ +L SL VY I +GW+SNS
Sbjct: 87 ALVPSILLLTIIPFGPGFRVGNTYIEPIIADVNIALLLAFAFGSLSVYGTIFSGWASNSK 146
Query: 387 YALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFY--LYQEXXXXXXXXXXXXXX 560
YA +G LR A I+YEV Q+
Sbjct: 147 YAFIGSLRKAAVVIAYEVVLGFSVLGVILLAGTLSTVGIVEAQIQKGVWFIFYQPVAFIL 206
Query: 561 XXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEY 692
AE+ R PFD E E ELV+G+N+EY F LAE+
Sbjct: 207 YLFCMLAESGRVPFDIQEAEAELVTGYNVEYGGMKFGAFPLAEW 250
>UniRef50_Q67P15 Cluster: NADH-quinone oxidoreductase subunit H 1;
n=1; Symbiobacterium thermophilum|Rep: NADH-quinone
oxidoreductase subunit H 1 - Symbiobacterium
thermophilum
Length = 328
Score = 108 bits (259), Expect = 2e-22
Identities = 69/216 (31%), Positives = 92/216 (42%), Gaps = 6/216 (2%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
A L RK L Y R GP KVG G+LQP +D IK+ KE P ++ Y +PV
Sbjct: 26 AVFLLFMRKFLAYFAYRVGPVKVGPWGVLQPIADVIKMLFKEDIMPEQADPLIYRLAPVI 85
Query: 240 RFIXXXXXXXXIPYI------FNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLG 401
F IP+ ++ N G+L L + ++GVY + GW+S + Y LLG
Sbjct: 86 AFFCALGVWVVIPWAPRGSWWSSMADPNAGVLVILAIAAMGVYGTALGGWASQNKYGLLG 145
Query: 402 GLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXA 581
+R+ AQ ISYE+ Y Q A
Sbjct: 146 SMRATAQMISYELAMAMSLLGVILMTGSVSMYDIVDAQRNMINLFPQFLGFLVFYIASLA 205
Query: 582 ETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAE 689
E TPFD E E ELV+G++ +Y F L FL E
Sbjct: 206 EAGWTPFDLPESETELVAGYHTDYGGMRFGLFFLTE 241
>UniRef50_A3QRI2 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=1; Microcotyle sebastis|Rep: NADH-ubiquinone
oxidoreductase chain 1 - Microcotyle sebastis
Length = 305
Score = 107 bits (258), Expect = 2e-22
Identities = 70/222 (31%), Positives = 102/222 (45%), Gaps = 6/222 (2%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTK----ERTYPNFSNYFCYYF 227
AF LLERK+LG Q R GP KV F+G+LQ F+D IKL K +Y +Y+
Sbjct: 25 AFFVLLERKILGVCQARLGPQKVSFLGILQSFADFIKLLAKLGVSFGSYKGLKYRGLFYW 84
Query: 228 SPVFRFIXXXXXXXXIPYIFNLICFNLG--ILFFLCLTSLGVYIVIIAGWSSNSNYALLG 401
V F+ + N+ + + + + +SL Y I+ GW SNS Y+L G
Sbjct: 85 LGVIYFLLGATTFISFFILGNVSSWVVSNYTCWLIVFSSLSGYGFIMCGWGSNSKYSLYG 144
Query: 402 GLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXA 581
+R+ +IS+E F + +
Sbjct: 145 AIRASFSSISFE--GVLMCIVLSVGLYYGCYSFSVINNYEGSLSIGALTLYICSVIGVMS 202
Query: 582 ETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILF 707
E NR+PFDF+E E +LVSGFN +Y FA++F +EYS ++F
Sbjct: 203 ECNRSPFDFSESESDLVSGFNTDYYGASFAILFASEYSIMIF 244
>UniRef50_Q6N1Z4 Cluster: NADH-quinone oxidoreductase subunit H 2;
n=12; Bacteria|Rep: NADH-quinone oxidoreductase subunit
H 2 - Rhodopseudomonas palustris
Length = 319
Score = 106 bits (255), Expect = 5e-22
Identities = 64/214 (29%), Positives = 98/214 (45%), Gaps = 2/214 (0%)
Frame = +3
Query: 69 TLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRF- 245
T +ER++LG++Q R GPN+VG G LQ +D +K+ TKE P ++ Y +P
Sbjct: 26 TWVERRLLGFVQERYGPNRVGPFGSLQWVADTVKILTKEDRPPPGADKLLYILAPAVAAT 85
Query: 246 -IXXXXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVAQ 422
+ I + L ++G+LF L + L Y ++ W+SN+ ++LLGG+R+ AQ
Sbjct: 86 PVLAGFGVVAIGDGWALSSVDVGLLFLLGMLGLTAYAAVLGAWASNNRFSLLGGMRAAAQ 145
Query: 423 TISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNRTPF 602
++YEV Q A +R PF
Sbjct: 146 MLAYEVFLGLSLMGVVMIAGSFSMAEIVEAQRGVWFVVLQPLGMALFTIAGIAAAHRLPF 205
Query: 603 DFAEGERELVSGFNIEYRRGGFALIFLAEYSSIL 704
D E E +L++GF EY F L FL EY ++L
Sbjct: 206 DLPESENDLIAGFITEYTGMSFGLFFLGEYLAVL 239
>UniRef50_Q2IL15 Cluster: NADH-quinone oxidoreductase subunit H;
n=3; Anaeromyxobacter|Rep: NADH-quinone oxidoreductase
subunit H - Anaeromyxobacter dehalogenans (strain 2CP-C)
Length = 413
Score = 105 bits (253), Expect = 8e-22
Identities = 70/216 (32%), Positives = 100/216 (46%), Gaps = 8/216 (3%)
Frame = +3
Query: 78 ERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFIXXX 257
E +V +Q R G N+VG G Q +DA+KL KE P ++ + +P F +
Sbjct: 51 EMRVSARMQSRIGYNRVGAAGFFQWIADAVKLLLKEDLIPADADRLLFRAAPYFVLVGFA 110
Query: 258 XXXXXIPYIFNLIC--FNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVAQTIS 431
+P+ +LI N+GI + +T+L V +++AGWSSNS +AL GG+RS AQ IS
Sbjct: 111 LVFVALPFGESLIAADLNVGIFYITAVTALVVVGILVAGWSSNSKWALFGGMRSAAQVIS 170
Query: 432 YE------VRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNR 593
YE V + ++ AE NR
Sbjct: 171 YEIPAGLAVMVPVLMSGTLSMQGIIRSQGAWPWEWHALTNPFAMVAFAIFFVAQLAEGNR 230
Query: 594 TPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSI 701
TPFD E E ELV+G+ EY FAL FL E+ ++
Sbjct: 231 TPFDLPEAESELVAGYLSEYSAFRFALFFLVEFGNL 266
>UniRef50_Q1HBB1 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=1; Strelkovimermis spiculatus|Rep: NADH-ubiquinone
oxidoreductase chain 1 - Strelkovimermis spiculatus
Length = 288
Score = 103 bits (248), Expect = 3e-21
Identities = 67/214 (31%), Positives = 98/214 (45%)
Frame = +3
Query: 63 FLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFR 242
F TLLERK+L QIR GPNK IG++QP D +KL K + + F
Sbjct: 16 FFTLLERKLLSLSQIRLGPNKTLIIGMIQPILDGLKLIKKGIIFNKKIYIIMFNMGAFFL 75
Query: 243 FIXXXXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVAQ 422
+ P++ I ++ + + L L L Y++ + GWSS S ++ LG +R++AQ
Sbjct: 76 LMLAIFLWMSFPFLM-WINKSMVMFWILLLLGLSTYMLFLIGWSSLSKFSFLGSMRALAQ 134
Query: 423 TISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNRTPF 602
TIS EV Y Y + E +R P
Sbjct: 135 TISLEV---LFSMLMFLGFSLMSKYNTTYYNQ--SNNLVQVTLTFYFFITILIEAHRAPM 189
Query: 603 DFAEGERELVSGFNIEYRRGGFALIFLAEYSSIL 704
D +E E ELVSG+N E+ F +IFL+EYS+++
Sbjct: 190 DLSESESELVSGYNTEFSSVTFVMIFLSEYSNMI 223
>UniRef50_Q9B8Z5 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=11; Schistosomatidae|Rep: NADH-ubiquinone
oxidoreductase chain 1 - Schistosoma japonicum (Blood
fluke)
Length = 296
Score = 103 bits (247), Expect = 4e-21
Identities = 68/211 (32%), Positives = 96/211 (45%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
AF L ERKVLGYIQ+RKGPNKVG +GL Q F+D IKL +K + + + +F
Sbjct: 21 AFFILSERKVLGYIQLRKGPNKVGLVGLFQSFADFIKLLSKYKIDGYTVHSWFSWFGCAI 80
Query: 240 RFIXXXXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVA 419
I + + +L+ L L++ Y +++ GW S + Y+L+ +R
Sbjct: 81 LLICSSIGVFIYASDCGGLYYKFMMLYILILSTFTGYGLLMLGWGSWNKYSLISAVRVAF 140
Query: 420 QTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNRTP 599
+IS+E Y Y + AE+NR+P
Sbjct: 141 ASISFEA------TFMCLVLVLGVIYNDYGNLDITYLIVIAPLNYFAWSVSLLAESNRSP 194
Query: 600 FDFAEGERELVSGFNIEYRRGGFALIFLAEY 692
FD+ E E ELVSG N EY F +IF EY
Sbjct: 195 FDYGESESELVSGLNTEYSGLSFIVIFAFEY 225
>UniRef50_Q8WAI8 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=1; Alboglossiphonia heteroclita|Rep: NADH-ubiquinone
oxidoreductase chain 1 - Alboglossiphonia heteroclita
Length = 199
Score = 103 bits (246), Expect = 6e-21
Identities = 61/143 (42%), Positives = 77/143 (53%), Gaps = 20/143 (13%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
AF TLLERK+LGY QIRKGPNKV FIGL QP +DA+KLF KE+ +N + +P+
Sbjct: 25 AFYTLLERKLLGYFQIRKGPNKVIFIGLPQPLADAMKLFLKEQMIQINANLSLFIGAPMM 84
Query: 240 RFIXXXXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAG----------------- 368
P+ GI++FLC++++ VY IAG
Sbjct: 85 SLFLALMLWCIYPHQNTSFWLQYGIMYFLCISAMNVYATFIAGSYEVSMSMILLSALILS 144
Query: 369 ---WSSNSNYALLGGLRSVAQTI 428
WSSNS YALLG R VAQT+
Sbjct: 145 TFMWSSNSKYALLGAYRGVAQTM 167
>UniRef50_A4GJ19 Cluster: Putative respiratory-chain NADH
dehydrogenase subunit H; n=1; uncultured Nitrospinaceae
bacterium|Rep: Putative respiratory-chain NADH
dehydrogenase subunit H - uncultured Nitrospinaceae
bacterium
Length = 358
Score = 102 bits (245), Expect = 8e-21
Identities = 73/227 (32%), Positives = 104/227 (45%), Gaps = 18/227 (7%)
Frame = +3
Query: 66 LTLLERKVLGYIQIRKGPNKVG-----FIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFS 230
LT +ERK +Q R G N+ F+GL +DA+K+FTKE P+ +N F + S
Sbjct: 27 LTWVERKQSALMQDRIGANRADIMGFTFLGLFHIIADALKMFTKEDFIPDGANKFLHTMS 86
Query: 231 PVFRFIXXXXXXXXIPY-----IF----NLICFNL--GILFFLCLTSLGVYIVIIAGWSS 377
P+ + +P+ +F NL+ +L G+LF + SL Y +IAGWSS
Sbjct: 87 PIVALVPALLTFAVVPFGGQYTLFDKEVNLVISDLDVGLLFVFAIASLATYGYVIAGWSS 146
Query: 378 NSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQE--XXXXXXXXXXX 551
N+N++LLG +R+ +Q ISYEV QE
Sbjct: 147 NNNWSLLGSMRTASQMISYEVTMGLTIIGVLMVYGSMKLTEIGTIQENFWMWGIFLQPLG 206
Query: 552 XXXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEY 692
AE R PFD E E ELV+G+ EY F + F+AE+
Sbjct: 207 FFMFLTASIAENKRIPFDAPEAESELVAGYFTEYSGLKFGMFFMAEF 253
>UniRef50_P05513 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=16; Oligohymenophorea|Rep: NADH-ubiquinone
oxidoreductase chain 1 - Paramecium tetraurelia
Length = 261
Score = 101 bits (242), Expect = 2e-20
Identities = 68/218 (31%), Positives = 100/218 (45%), Gaps = 2/218 (0%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
A +TLLERK+L +Q R GPN VG+ G LQ +DA+KLF K P+ +N F + P
Sbjct: 17 ASITLLERKLLSLVQRRVGPNFVGYKGRLQYLADALKLFLKGVAIPSGANSFFFVAMPSL 76
Query: 240 RFIXXXXXXXXIPYIFNLICFNL--GILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRS 413
+ +L F++ I++ L+ L V++ G+ S + Y+++ GLR+
Sbjct: 77 AGAVCYTFWMNSIWGPSLSMFDVEYNIVYASLLSILFGLCVMLTGYFSKNKYSVMAGLRA 136
Query: 414 VAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNR 593
++ E+ F +YQE E NR
Sbjct: 137 AILMLNLEIFLGIVFLNVCFLVESFSFAAFAVYQEIFWLIFLFFFLLSNILLVFLLEVNR 196
Query: 594 TPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILF 707
TPFD AE E ELV+G+ EY FAL +L EY + F
Sbjct: 197 TPFDLAEAESELVTGYTTEYGGFYFALFYLGEYFHLFF 234
>UniRef50_A1Z3A0 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=3; Romanomermis|Rep: NADH-ubiquinone oxidoreductase
chain 1 - Romanomermis nielseni
Length = 305
Score = 99 bits (238), Expect = 5e-20
Identities = 65/216 (30%), Positives = 99/216 (45%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
A+ TLLERK+L Q+R GPNKV +GL+QP D +KL K S + ++
Sbjct: 17 AYFTLLERKILSLSQMRLGPNKVLMLGLIQPILDGLKLMKKLLIMSLNSMVLFLMMNSMW 76
Query: 240 RFIXXXXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVA 419
F P+ F L+ + L+ L L Y +++ GWSS + ++ LGG RS++
Sbjct: 77 MFSISMLLWFMFPF-FALMNKSSFFLWILLLFGFLSYFILMIGWSSMNKFSYLGGTRSLS 135
Query: 420 QTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNRTP 599
Q++S+E+ L E R+P
Sbjct: 136 QSLSFEILILLIMTPPFMISKCS------LLTLSNKFSLINFTMILVFFILSILECQRSP 189
Query: 600 FDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILF 707
D +EGE ELVSG+N+E F +FL EY++++F
Sbjct: 190 MDLSEGESELVSGYNVELSSITFIFVFLGEYNTMIF 225
>UniRef50_Q0LPS5 Cluster: Respiratory-chain NADH dehydrogenase,
subunit 1; n=1; Herpetosiphon aurantiacus ATCC
23779|Rep: Respiratory-chain NADH dehydrogenase, subunit
1 - Herpetosiphon aurantiacus ATCC 23779
Length = 413
Score = 99.5 bits (237), Expect = 7e-20
Identities = 53/128 (41%), Positives = 76/128 (59%), Gaps = 2/128 (1%)
Frame = +3
Query: 63 FLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFR 242
FLT ER+ + Y+Q R+GPN+VG GLLQP S+AIK TKE P ++ ++ +PV
Sbjct: 37 FLTWYERRAISYMQDRRGPNRVGPQGLLQPISEAIKTMTKEDATPREADRIVHFLAPVVM 96
Query: 243 FIXXXXXXXXIPY--IFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSV 416
IP+ +F + N +LF + L +++AGW SN+ +ALLGG+R V
Sbjct: 97 LGATVLSFAVIPWGRMFP-VDLNAAVLFVIATGGLHSIGMMMAGWGSNNKFALLGGMRGV 155
Query: 417 AQTISYEV 440
AQ ISYE+
Sbjct: 156 AQLISYEI 163
Score = 41.1 bits (92), Expect = 0.026
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = +3
Query: 579 AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSIL 704
AE RTPFD E + E+++G+ EY FA+ +L+ Y S L
Sbjct: 216 AEGERTPFDIPEADSEIIAGYMTEYSGMKFAVFYLSNYMSNL 257
>UniRef50_Q9B893 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=30; Schistosoma|Rep: NADH-ubiquinone oxidoreductase
chain 1 - Schistosoma malayensis
Length = 297
Score = 97.9 bits (233), Expect = 2e-19
Identities = 65/210 (30%), Positives = 94/210 (44%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
AF L ERKVL YIQ+RKGPNKVG GLLQ F+D +KL K + + + +
Sbjct: 23 AFFILCERKVLSYIQLRKGPNKVGIAGLLQSFADFMKLVVKIKVNGYIVHSWFGWLGCFM 82
Query: 240 RFIXXXXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVA 419
F F+ I ++ +L+ L + + Y +++ GW+S + Y+LL +R
Sbjct: 83 LFFCSCMGVYIYSCSFSGIYYSFMMLYILMVFTFISYGLLMLGWASWNKYSLLSAVRVAF 142
Query: 420 QTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNRTP 599
++SYE+ F L +E+NR P
Sbjct: 143 SSVSYEMILMCVLLVFGMLLGSYGNVSFCLMS------FITPLNYIVWIISMFSESNRAP 196
Query: 600 FDFAEGERELVSGFNIEYRRGGFALIFLAE 689
FD+ E E ELVSG N EY F +I+ E
Sbjct: 197 FDYGESESELVSGSNTEYSGVPFMIIYACE 226
>UniRef50_Q6G395 Cluster: NADH-quinone oxidoreductase subunit H;
n=22; cellular organisms|Rep: NADH-quinone
oxidoreductase subunit H - Bartonella henselae
(Rochalimaea henselae)
Length = 349
Score = 97.5 bits (232), Expect = 3e-19
Identities = 53/129 (41%), Positives = 73/129 (56%), Gaps = 2/129 (1%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
A+L +RK+ +Q+R+GPN VG GLLQ F+D IK KE P +N + +P
Sbjct: 32 AYLLYADRKIWAAVQLRRGPNVVGPWGLLQSFADLIKFVVKEPIIPAGANKGVFLLAPFV 91
Query: 240 RFIXXXXXXXXIPYI--FNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRS 413
IP + + N+G+L+ L ++SL VY VI+ GW+SNS Y LG LRS
Sbjct: 92 SATLALSTWAVIPVNEGWAVANINVGLLYILAISSLEVYGVIMGGWASNSKYPFLGALRS 151
Query: 414 VAQTISYEV 440
AQ +SYEV
Sbjct: 152 AAQMVSYEV 160
Score = 48.4 bits (110), Expect = 2e-04
Identities = 22/42 (52%), Positives = 27/42 (64%)
Frame = +3
Query: 579 AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSIL 704
AETNR PFD E E ELV+G +EY + L FL EY +I+
Sbjct: 221 AETNRPPFDLVEAESELVAGHMVEYSSTPYMLFFLGEYVAIV 262
>UniRef50_Q8PU59 Cluster: F(420)H(2) oxidoreductase subunit H
(F(420)H(2) dehydrogenase subunit H); n=2;
Methanosarcina|Rep: F(420)H(2) oxidoreductase subunit H
(F(420)H(2) dehydrogenase subunit H) - Methanosarcina
mazei (Methanosarcina frisia)
Length = 350
Score = 97.5 bits (232), Expect = 3e-19
Identities = 68/221 (30%), Positives = 99/221 (44%), Gaps = 11/221 (4%)
Frame = +3
Query: 75 LERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFIXX 254
+ERK+ IQ+R GP++VG GLLQ +DAIKLFTKE P ++ F Y +PVF
Sbjct: 41 IERKLSADIQLRYGPSRVGKFGLLQLVADAIKLFTKEDVRPGNADRFLYDNAPVFMLTSL 100
Query: 255 XXXXXXIP----------YIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGG 404
IP Y + ++ ILF ++++ ++ + +A + SN+ Y+LLG
Sbjct: 101 FLMLVAIPVGAVFIDGNLYPLAVTEMDISILFIEAVSAINIFGIFMAAYGSNNKYSLLGA 160
Query: 405 LRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQ-EXXXXXXXXXXXXXXXXXXXXA 581
R+ A+ I YEV Q A
Sbjct: 161 FRNFARMIGYEVPLGIAIVSVAVMTGSLNIIDITSAQGSFVWNIFLQPIGFVVFFIALMA 220
Query: 582 ETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSIL 704
+ R PFD E E ELV+G+ EY F L+F AEY ++
Sbjct: 221 DLGRLPFDQNESEEELVAGWVTEYTGMRFGLVFFAEYMHMI 261
>UniRef50_A7BBX4 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 442
Score = 96.7 bits (230), Expect = 5e-19
Identities = 66/221 (29%), Positives = 92/221 (41%), Gaps = 11/221 (4%)
Frame = +3
Query: 75 LERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFIXX 254
+ER+ LG +Q R GPN G +GL Q F+DA KL KE + + F Y+ +P
Sbjct: 45 VERRGLGRMQTRPGPNVAGPLGLFQAFADAGKLLFKEDMWTRRAERFLYFLAPAIAAFAA 104
Query: 255 XXXXXXIPYIFNLICFN-----------LGILFFLCLTSLGVYIVIIAGWSSNSNYALLG 401
IP N+ F + L+ L + SLG+Y +++ GWS+ S L G
Sbjct: 105 FSVYAVIPMGPNVKIFGHSTPLQLADMPVASLYILAIASLGLYGIVLGGWSTRSTLPLYG 164
Query: 402 GLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXA 581
+RS AQ ISYE+ Q
Sbjct: 165 AVRSSAQVISYELAMGLSLVSVFLMSGSMSTSQIVAAQGQFWWAFTLFPAFVIYCISAVG 224
Query: 582 ETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSIL 704
E NR PFD E E E+V+G EY F +L+EY ++L
Sbjct: 225 EVNRLPFDLPEAEGEIVAGHMTEYSSMKFGWYYLSEYVNML 265
>UniRef50_Q5DNB6 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=1; Leptorhynchoides thecatus|Rep: NADH-ubiquinone
oxidoreductase chain 1 - Leptorhynchoides thecatus
Length = 305
Score = 96.7 bits (230), Expect = 5e-19
Identities = 68/216 (31%), Positives = 89/216 (41%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
+F TLLERKVLG Q+RKGPNK GL QP D KLF K + YYFSP+
Sbjct: 24 SFFTLLERKVLGLGQVRKGPNKGIIWGLFQPLLDGFKLFMKGINLLSLGGLLNYYFSPML 83
Query: 240 RFIXXXXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVA 419
++ + + ++SL +Y ++G S S Y +LG LR+ A
Sbjct: 84 GLSTVLFIWGLFSLVWGSGSMTHIFVIPILISSLLIYFFYLSGLFSGSVYGVLGSLRAAA 143
Query: 420 QTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNRTP 599
Q +SYE ++ E NRTP
Sbjct: 144 QFLSYECIVLLSFISMFGLLGSYLVPILFV-------PFLISIIFILLVFGVIMEVNRTP 196
Query: 600 FDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILF 707
DF EGE ELVSG E F+ + L EY + F
Sbjct: 197 VDFVEGESELVSGLVTEMGGLSFSCLVLGEYGMMCF 232
>UniRef50_Q6XZ11 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=2; Biomphalaria|Rep: NADH-ubiquinone oxidoreductase
chain 1 - Biomphalaria straminea
Length = 138
Score = 96.3 bits (229), Expect = 7e-19
Identities = 44/100 (44%), Positives = 62/100 (62%)
Frame = +3
Query: 141 LLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFIXXXXXXXXIPYIFNLICFNLGILF 320
+LQPF+DA+KLF E P SN Y +P+ F P + + + G+L
Sbjct: 1 ILQPFADAVKLFLNEMILPMKSNKILYVVAPIMGFALALFLWVIYPSKYCVKFISFGLLI 60
Query: 321 FLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVAQTISYEV 440
FLC++++ VY +++AGW+SNS YA LG LR+ AQTISYEV
Sbjct: 61 FLCISAINVYCILLAGWTSNSKYAFLGALRASAQTISYEV 100
>UniRef50_Q37165 Cluster: NAD(P)H-quinone oxidoreductase subunit 1,
chloroplast (EC 1.6.5.-) (NAD(P)H dehydrogenase subunit
1); n=178; cellular organisms|Rep: NAD(P)H-quinone
oxidoreductase subunit 1, chloroplast (EC 1.6.5.-)
(NAD(P)H dehydrogenase subunit 1) - Arabidopsis thaliana
(Mouse-ear cress)
Length = 360
Score = 95.9 bits (228), Expect = 9e-19
Identities = 62/216 (28%), Positives = 96/216 (44%), Gaps = 6/216 (2%)
Frame = +3
Query: 75 LERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFIXX 254
LER++ IQ R GP G +G+LQ +D KL KE P+ N + P I
Sbjct: 50 LEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKENLRPSRGNTPLFSIGPSIAVISI 109
Query: 255 XXXXXXIPYIFNLIC--FNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVAQTI 428
IP+ +L+ N+GI ++ ++S+ ++++G+ SN+ Y+ LGGLR+ AQ+I
Sbjct: 110 LLSYSVIPFSNHLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSI 169
Query: 429 SYEVRXXXXXXXXXXXXXXXXXYFFY----LYQEXXXXXXXXXXXXXXXXXXXXAETNRT 596
SYE+ Y AE+ R
Sbjct: 170 SYEIPLTLCVLSISLLSNSLSTVDIVEAQSKYGFWGWNLWRQPIGFIIFLISSLAESERL 229
Query: 597 PFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSIL 704
PFD E E EL++G+ EY F L ++A Y ++L
Sbjct: 230 PFDLPEAEEELIAGYQTEYSGIKFGLFYVASYLNLL 265
>UniRef50_Q9T6M0 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=1; Globodera pallida|Rep: NADH-ubiquinone
oxidoreductase chain 1 - Globodera pallida
Length = 287
Score = 94.7 bits (225), Expect = 2e-18
Identities = 67/208 (32%), Positives = 95/208 (45%), Gaps = 2/208 (0%)
Frame = +3
Query: 63 FLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFR 242
FL + E +LG+ Q+R PNK FIG LQ SD +KLF KE + F ++F + +
Sbjct: 19 FLVMSEHYLLGFSQLRVSPNKFFFIGYLQALSDGLKLFKKELIFLLGFLVFIFFFFSLSQ 78
Query: 243 FIXXXXXXXXIPYIFNLICFNL--GILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSV 416
F + + F L C L I F + L L ++ + S S Y+LLG LR
Sbjct: 79 FF-----LSLLFFSFFLFCLGLKFNIFFLMFLLGLITFLFFFLSYYSVSKYSLLGSLRLF 133
Query: 417 AQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNRT 596
+Q++S+++ +F L E E NR+
Sbjct: 134 SQSVSFDL-------VYFFLLFMLVFFFQSLDLEVIFFFLFFILFFFFLLLLLVTEANRS 186
Query: 597 PFDFAEGERELVSGFNIEYRRGGFALIF 680
PFDF+EGE ELVSG+N+E GG IF
Sbjct: 187 PFDFSEGESELVSGYNLEL--GGLVFIF 212
>UniRef50_Q9PMA3 Cluster: NADH-quinone oxidoreductase subunit H;
n=33; Epsilonproteobacteria|Rep: NADH-quinone
oxidoreductase subunit H - Campylobacter jejuni
Length = 332
Score = 94.7 bits (225), Expect = 2e-18
Identities = 67/226 (29%), Positives = 96/226 (42%), Gaps = 14/226 (6%)
Frame = +3
Query: 69 TLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFI 248
T ERKVL Y Q R GP+ VG GL+Q +D IKLFTKE P+ S F + +P+ I
Sbjct: 30 TYAERKVLAYFQRRIGPDMVGPFGLIQLVADMIKLFTKEDIIPSNSQKFIFAIAPLISAI 89
Query: 249 XXXXXXXXIPYIFNLICF-----------NLGILFFLCLTSLGVYIVIIAGWSSNSNYAL 395
IP + F N+ +LF + + L Y V + G +SN+ +++
Sbjct: 90 CAFVSLAAIPMLPEFTLFGRVIQPIVADINVALLFVIGTSGLCFYAVFLGGLASNNKWSI 149
Query: 396 LGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXX 575
LG R + ISYE YQ
Sbjct: 150 LGAARGLVSIISYESVGALALIAIIMLVGSFSLVDINNYQSDGFFSWLIFKQPLAFVLFI 209
Query: 576 XA---ETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSIL 704
A ETNRTP E + E+V+G+ EY + + F+ EY+S++
Sbjct: 210 IALFIETNRTPLCLTENDAEIVAGYGTEYSGLRWGMFFIGEYTSMI 255
>UniRef50_A7CXQ4 Cluster: NADH dehydrogenase; n=1; Opitutaceae
bacterium TAV2|Rep: NADH dehydrogenase - Opitutaceae
bacterium TAV2
Length = 396
Score = 93.9 bits (223), Expect = 3e-18
Identities = 48/129 (37%), Positives = 72/129 (55%), Gaps = 2/129 (1%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
A T+ ERKVLG Q R GPN+ G G +QPF+DA+K TKE P ++ ++ +P
Sbjct: 47 ALFTVTERKVLGRFQNRYGPNRTGPFGYMQPFADAVKALTKEDLIPATADKLLHFLAPCC 106
Query: 240 RFIXXXXXXXXIPYIFNLICFNL--GILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRS 413
IP +L NL GIL+F + + +AGWSS++ Y+L+ +R+
Sbjct: 107 AVFFALLGFAVIPCGLHLTALNLDAGILYFFAAGAATELAIFMAGWSSHNKYSLISAMRA 166
Query: 414 VAQTISYEV 440
+AQ IS+E+
Sbjct: 167 LAQLISFEL 175
Score = 43.6 bits (98), Expect = 0.005
Identities = 19/38 (50%), Positives = 24/38 (63%)
Frame = +3
Query: 579 AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEY 692
AETNR PFD E E E+++G EY +AL F+ EY
Sbjct: 232 AETNRCPFDLPEAESEIIAGHLTEYSGFKYALFFMGEY 269
>UniRef50_A5UXK5 Cluster: NADH dehydrogenase; n=2; Roseiflexus|Rep:
NADH dehydrogenase - Roseiflexus sp. RS-1
Length = 452
Score = 93.9 bits (223), Expect = 3e-18
Identities = 46/123 (37%), Positives = 77/123 (62%), Gaps = 2/123 (1%)
Frame = +3
Query: 78 ERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFIXXX 257
ER+V+ +Q R GPN+VG GLLQP +DA+K+FTKE P ++ + + +PV
Sbjct: 45 ERRVVARMQDRLGPNRVGPAGLLQPIADAVKMFTKEDIVPRNADRWVHLLAPVVSLAPVA 104
Query: 258 XXXXXIPY--IFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVAQTIS 431
IP+ + I N+ +L+ + ++++ +++AGW SN+ +ALLG +R+VAQ +S
Sbjct: 105 MMLAVIPWGRGWEPIDLNVALLYIVAVSAVSGVGLMMAGWGSNNKFALLGAMRAVAQLVS 164
Query: 432 YEV 440
YE+
Sbjct: 165 YEI 167
Score = 40.3 bits (90), Expect = 0.045
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +3
Query: 579 AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEY 692
AE RTPFD E + E+V+G+ EY FA ++A+Y
Sbjct: 258 AEGERTPFDIPEADSEIVAGYMTEYSGMKFATFYIAQY 295
>UniRef50_Q7YCX1 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=33; Arion|Rep: NADH-ubiquinone oxidoreductase chain 1
- Arion ater
Length = 145
Score = 93.9 bits (223), Expect = 3e-18
Identities = 48/104 (46%), Positives = 65/104 (62%), Gaps = 1/104 (0%)
Frame = +3
Query: 132 FIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFIXXXXXXXXIPYIFNLICFNL- 308
++GLLQPF+DA+KLF KE P SN + PV F + N+ + L
Sbjct: 1 YLGLLQPFADALKLFLKETIKPQHSNSIMFTVVPVLGF-SLALMFWGMTSSSNISYYLLF 59
Query: 309 GILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVAQTISYEV 440
+L F C+TSL VY+V+++GW+SNS YA LG LR+ AQTISYE+
Sbjct: 60 SLLLFFCMTSLNVYVVLLSGWTSNSMYAFLGALRASAQTISYEI 103
>UniRef50_Q11RU2 Cluster: NADH-quinone oxidoreductase subunit H 2;
n=2; Flexibacteraceae|Rep: NADH-quinone oxidoreductase
subunit H 2 - Cytophaga hutchinsonii (strain ATCC 33406
/ NCIMB 9469)
Length = 365
Score = 93.9 bits (223), Expect = 3e-18
Identities = 48/128 (37%), Positives = 74/128 (57%), Gaps = 2/128 (1%)
Frame = +3
Query: 63 FLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFR 242
F+ ERKV +IQ R GP +VG G+LQ +D IKL KE +N F + +PV
Sbjct: 17 FVVWAERKVAAFIQDRLGPMEVGPYGMLQTIADLIKLLQKEDIIATGANRFLFRLAPVLI 76
Query: 243 FIXXXXXXXXIPYIFNLI--CFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSV 416
F +P+ +LI ++G+ F + + SL V + +AGW+SN+ +++LG R++
Sbjct: 77 FTAIFAGFATLPFAPDLIGSKADVGVFFMITIVSLDVVGIFLAGWASNNKFSILGAFRAI 136
Query: 417 AQTISYEV 440
AQ ISYE+
Sbjct: 137 AQVISYEI 144
Score = 56.4 bits (130), Expect = 6e-07
Identities = 26/42 (61%), Positives = 31/42 (73%)
Frame = +3
Query: 579 AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSIL 704
AE NR PFD EGE ELVSGF+ EY FA++FLAEY+ +L
Sbjct: 223 AECNRAPFDIPEGESELVSGFHTEYTGFRFAILFLAEYAMML 264
>UniRef50_Q3E1S2 Cluster: Respiratory-chain NADH dehydrogenase,
subunit 1; n=2; Chloroflexus|Rep: Respiratory-chain NADH
dehydrogenase, subunit 1 - Chloroflexus aurantiacus
J-10-fl
Length = 440
Score = 93.5 bits (222), Expect = 5e-18
Identities = 45/128 (35%), Positives = 77/128 (60%), Gaps = 2/128 (1%)
Frame = +3
Query: 63 FLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFR 242
F T ER+V+ +Q R GPN+VG G+ QP +D +K+FTKE P ++ ++ +P
Sbjct: 44 FFTYYERRVIARMQDRIGPNRVGPEGIWQPIADGVKMFTKEDIVPAAADRIVHFLAPCVV 103
Query: 243 FIXXXXXXXXIPYIFNLICFNL--GILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSV 416
+P+ + +L G+LFF ++S+ +++AGW+SN+ ++LLG +R+V
Sbjct: 104 VAPTVLMFAVVPWGPGMTPVDLPTGLLFFFAVSSISAVGLMMAGWASNNKFSLLGAMRAV 163
Query: 417 AQTISYEV 440
AQ +SYE+
Sbjct: 164 AQMVSYEI 171
Score = 41.5 bits (93), Expect = 0.020
Identities = 18/38 (47%), Positives = 24/38 (63%)
Frame = +3
Query: 579 AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEY 692
AE RTPFD E + E+V+G+ EY F L +LA+Y
Sbjct: 236 AEGERTPFDIPEADSEIVAGYMTEYSGMKFGLFYLAQY 273
>UniRef50_Q7YCU4 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=1; Deroceras sp. 60A-JQ-2003|Rep: NADH-ubiquinone
oxidoreductase chain 1 - Deroceras sp. 60A-JQ-2003
Length = 145
Score = 93.1 bits (221), Expect = 6e-18
Identities = 45/101 (44%), Positives = 61/101 (60%)
Frame = +3
Query: 138 GLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFIXXXXXXXXIPYIFNLICFNLGIL 317
G+ QP +DA+KLF KE+ SN +Y +PV F+ P + + G+L
Sbjct: 3 GIFQPLADALKLFMKEKVNLVSSNSVVFYITPVIGFMLGLLIWFLYPSHWAINFVVWGVL 62
Query: 318 FFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVAQTISYEV 440
F C++SL VYI ++AGW SNS YA LG +R+ AQTISYEV
Sbjct: 63 CFFCISSLNVYITMMAGWGSNSKYAFLGAIRAAAQTISYEV 103
>UniRef50_A6QCF5 Cluster: NADH-quinone oxidoreductase, chain H; n=2;
Epsilonproteobacteria|Rep: NADH-quinone oxidoreductase,
chain H - Sulfurovum sp. (strain NBC37-1)
Length = 343
Score = 89.4 bits (212), Expect = 7e-17
Identities = 68/235 (28%), Positives = 102/235 (43%), Gaps = 21/235 (8%)
Frame = +3
Query: 63 FLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFR 242
F T +ERKVL ++Q R GP VG GLLQ +D IKLFTKE P +N + +P
Sbjct: 34 FGTFIERKVLAFMQRRLGPMHVGPYGLLQLVADGIKLFTKEDIVPQNANSLIFKVAPSIT 93
Query: 243 FIXXXXXXXXIP-----------------YIFNLIC-FNLGILFFLCLTSLGVYIVIIAG 368
+P ++ ++ N+GILF L + + G+Y ++AG
Sbjct: 94 AATAFIALAAVPVFPDFTIPEWIPVLGGVFVPSIAADLNIGILFVLGMMAAGLYGPLLAG 153
Query: 369 WSSNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQE---XXXXXXX 539
+ + + ++G R+ Q +SYEV F Q
Sbjct: 154 MAQANKWGIIGAARTAIQFLSYEVVTGLSILAPIMLVGSLSFVDFNNAQAGGISHWLIWQ 213
Query: 540 XXXXXXXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSIL 704
AETNRTPFD E E E+VSG+ EY + + F+ EY++++
Sbjct: 214 QPVAFVLFLIAGFAETNRTPFDLLEHEAEVVSGYATEYSGMRWGMFFIGEYANMI 268
>UniRef50_Q6MGN3 Cluster: NADH-quinone oxidoreductase subunit H;
n=1; Bdellovibrio bacteriovorus|Rep: NADH-quinone
oxidoreductase subunit H - Bdellovibrio bacteriovorus
Length = 385
Score = 89.4 bits (212), Expect = 7e-17
Identities = 54/146 (36%), Positives = 78/146 (53%), Gaps = 21/146 (14%)
Frame = +3
Query: 66 LTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRF 245
L LER+ +IQ R GPN+VG +GL+Q +DA+K KE P + F YY +P+F
Sbjct: 31 LVWLERRGSAFIQDRLGPNRVGPLGLVQLLADAVKFLNKENFMPQTAKPFLYYAAPIFAL 90
Query: 246 IXXXXXXXXI-------------------PYIFNLICFNL--GILFFLCLTSLGVYIVII 362
I I PY F + +++ GI+F L ++SL Y +++
Sbjct: 91 IPGAVAFSAIPLSSPIQVGTFEMFGSTWGPYTFLVQGYDIGVGIVFILGVSSLAAYTLLM 150
Query: 363 AGWSSNSNYALLGGLRSVAQTISYEV 440
AGW S + Y L+G LR+ AQTISYE+
Sbjct: 151 AGWGSGNKYTLMGALRASAQTISYEL 176
Score = 50.0 bits (114), Expect = 6e-05
Identities = 22/42 (52%), Positives = 28/42 (66%)
Frame = +3
Query: 579 AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSIL 704
AE+NR PFD AEGE ELV GF+ EY F + F+ EY ++
Sbjct: 240 AESNRLPFDLAEGESELVGGFHTEYGGFKFNMFFIGEYGHMM 281
>UniRef50_Q979M4 Cluster: NADH dehydrogenase I chain E; n=4;
Thermoplasmatales|Rep: NADH dehydrogenase I chain E -
Thermoplasma volcanium
Length = 346
Score = 88.2 bits (209), Expect = 2e-16
Identities = 64/220 (29%), Positives = 98/220 (44%), Gaps = 11/220 (5%)
Frame = +3
Query: 75 LERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFIXX 254
L RK + +Q+R GPN+VG G LQ +DAIKL KE P + F Y +P FI
Sbjct: 45 LFRKYMARLQLRYGPNRVGKFGSLQLIADAIKLVGKESILPKLRDDFAYKTAPYIVFIGL 104
Query: 255 XXXXXXIPY-----IFNLICFNLGILFFLCLTSLGVYIV--IIAGWSSNSNYALLGGLRS 413
IPY I +L + + L ++ + + I+AG SS++ YALLG +R
Sbjct: 105 VVGFILIPYGDFYWIGSLTITHSDVSLILFFGAIAMMPIGEILAGISSHNKYALLGAMRG 164
Query: 414 VAQTISYEV----RXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXA 581
VA+ +S+EV + + + A
Sbjct: 165 VAKDVSFEVPMMLSAIALVMMDSAVNKTPLEFSSLVSTQFIPFGILQPLGLFVFMVAMIA 224
Query: 582 ETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSI 701
++ TPFD +E + E+VSG++ EY F L ++ + SI
Sbjct: 225 RSSYTPFDLSESDSEIVSGYSTEYSGMRFGLFYMGMFGSI 264
>UniRef50_Q8TQP1 Cluster: F(420)H(2) oxidoreductase subunit H
(F(420)H(2) dehydrogenase subunit H); n=3;
Methanosarcinales|Rep: F(420)H(2) oxidoreductase subunit
H (F(420)H(2) dehydrogenase subunit H) - Methanosarcina
acetivorans
Length = 348
Score = 88.2 bits (209), Expect = 2e-16
Identities = 62/216 (28%), Positives = 93/216 (43%), Gaps = 10/216 (4%)
Frame = +3
Query: 75 LERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFIXX 254
LERK+ IQ R GP++VG GLLQ +DAIKLFTKE P ++ + +P+F
Sbjct: 40 LERKLSADIQFRYGPSRVGKFGLLQLVADAIKLFTKEDMRPRNADRLLFDNAPIFMMSSV 99
Query: 255 XXXXXXIP----------YIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGG 404
IP Y + ++ +L+ ++++ ++ + + + SN+ Y+LLG
Sbjct: 100 FLMLVAIPVGAVFINGVEYPLAVTEMDISVLYIEAMSAITIFGIFMIAYGSNNKYSLLGA 159
Query: 405 LRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAE 584
R+ A+ + YEV Q A+
Sbjct: 160 FRNFARMVGYEVPLGITVVSVAIMTGSLNIVEIASAQGLLWNIFLQPIGFIVFFIALMAD 219
Query: 585 TNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEY 692
R PFD E E ELV+G+ EY F L F AEY
Sbjct: 220 MGRLPFDQNESEEELVAGWITEYTGMRFGLGFFAEY 255
>UniRef50_Q6ANM8 Cluster: NADH-quinone oxidoreductase subunit H;
n=3; Deltaproteobacteria|Rep: NADH-quinone
oxidoreductase subunit H - Desulfotalea psychrophila
Length = 333
Score = 87.4 bits (207), Expect = 3e-16
Identities = 45/129 (34%), Positives = 70/129 (54%), Gaps = 2/129 (1%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
A+L ER+ +IQ R GP + G GLLQP D IKL TK+ P + + +PV
Sbjct: 24 AYLVWAERRGAAFIQRRLGPVENGPWGLLQPPVDGIKLMTKQLVIPGGVDKILFMVAPVL 83
Query: 240 RFIXXXXXXXXIPYIFNLICFN--LGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRS 413
IP+ N++ N +G+L L S +++AGWSS + Y+++ +R+
Sbjct: 84 AMFPALMSFVTIPFSENIVAHNMDIGLLVILAFASFAGLAILLAGWSSRNKYSMMAAIRA 143
Query: 414 VAQTISYEV 440
V+QTI+YE+
Sbjct: 144 VSQTIAYEI 152
Score = 56.0 bits (129), Expect = 9e-07
Identities = 24/42 (57%), Positives = 30/42 (71%)
Frame = +3
Query: 579 AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSIL 704
AETNR PFD E E ELV+GF+ EY GF L F+ EY++I+
Sbjct: 211 AETNRAPFDLGEAESELVAGFHTEYSSMGFGLFFMGEYANIV 252
>UniRef50_A2Q588 Cluster: NADH-ubiquinone oxidoreductase, chain
49kDa; Respiratory-chain NADH dehydrogenase, subunit 1;
n=2; core eudicotyledons|Rep: NADH-ubiquinone
oxidoreductase, chain 49kDa; Respiratory-chain NADH
dehydrogenase, subunit 1 - Medicago truncatula (Barrel
medic)
Length = 288
Score = 84.2 bits (199), Expect = 3e-15
Identities = 42/124 (33%), Positives = 69/124 (55%), Gaps = 2/124 (1%)
Frame = +3
Query: 75 LERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFIXX 254
LER++ IQ R GP G G+LQ +D KL KE P+ + + P I
Sbjct: 150 LEREISAGIQQRIGPEYAGPFGILQALADGTKLLFKENLIPSRGDIRLFSIGPSISVISI 209
Query: 255 XXXXXXIPYIFNLIC--FNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVAQTI 428
IP+ +N + FN+G+ ++ ++S+ ++++G+ SN+ Y+ LGGLR+ AQ+I
Sbjct: 210 LISYSVIPFGYNFVLSDFNIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSI 269
Query: 429 SYEV 440
SYE+
Sbjct: 270 SYEI 273
>UniRef50_A7KJL0 Cluster: NADH dehydrogenase subunit 1; n=12;
Dysdera|Rep: NADH dehydrogenase subunit 1 - Dysdera
lancerotensis
Length = 112
Score = 83.8 bits (198), Expect = 4e-15
Identities = 45/94 (47%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
AF T+LERK L YIQ RKGPNKV +G+LQPFSDAIKLF K T P+ SN P
Sbjct: 19 AFYTILERKFLSYIQTRKGPNKVSLLGILQPFSDAIKLFNKTMTLPSASNITMIVTFPTI 78
Query: 240 RFIXXXXXXXXIPYI-FNLICFNLGILFFLCLTS 338
F +P FN+I +L L F ++S
Sbjct: 79 TFFLSLILWPTLPLSHFNMIDSSLTSLIFFVISS 112
>UniRef50_A3ZL02 Cluster: NADH dehydrogenase I chain H; n=1;
Blastopirellula marina DSM 3645|Rep: NADH dehydrogenase
I chain H - Blastopirellula marina DSM 3645
Length = 434
Score = 78.2 bits (184), Expect = 2e-13
Identities = 44/125 (35%), Positives = 64/125 (51%), Gaps = 3/125 (2%)
Frame = +3
Query: 75 LERKVLGYIQIRKGPNKVGF-IGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFIX 251
+ERK+ G IQ R GP + G G LQ +D IKL +KE P ++ + +P
Sbjct: 43 MERKIAGRIQDRLGPTRTGGKFGWLQTLADGIKLLSKEDLMPRDADPLLFKLAPYISLAA 102
Query: 252 XXXXXXXIPYIFNLICFNLGILFFLCLTSLG--VYIVIIAGWSSNSNYALLGGLRSVAQT 425
+P+ + L I F + LG V+ VI+AG+ S S ++L GG+R AQ
Sbjct: 103 SFTAFLALPFASGWVGVRLNIALFFVIAVLGLEVFGVILAGYGSGSKWSLFGGMRQAAQV 162
Query: 426 ISYEV 440
+SYEV
Sbjct: 163 VSYEV 167
Score = 48.4 bits (110), Expect = 2e-04
Identities = 23/41 (56%), Positives = 27/41 (65%)
Frame = +3
Query: 579 AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSI 701
A NR PFD AE E ELVSGF EY ++L F+AEY S+
Sbjct: 220 ASVNRAPFDLAEAESELVSGFLTEYSGIRWSLFFMAEYGSM 260
>UniRef50_Q6A6G5 Cluster: NADH-quinone oxidoreductase subunit H;
n=1; Propionibacterium acnes|Rep: NADH-quinone
oxidoreductase subunit H - Propionibacterium acnes
Length = 440
Score = 74.5 bits (175), Expect = 2e-12
Identities = 50/139 (35%), Positives = 67/139 (48%), Gaps = 13/139 (9%)
Frame = +3
Query: 63 FLTLLERKVLGYIQIRKGP--NKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPV 236
F ER+VL +Q R GP N G+ Q D +KL KE P ++ + +PV
Sbjct: 31 FNVWFERRVLAKMQNRIGPIMNSAWAGGVFQAVGDGLKLIFKEMLTPKGADKIVFNLAPV 90
Query: 237 FRFIXXXXXXXXIPYIFNLICFN-----------LGILFFLCLTSLGVYIVIIAGWSSNS 383
I IP + F + +LF L + S+G+Y V++AGWSS
Sbjct: 91 IAGIACFASWSVIPLGGQVSMFGHTTRLQITDVPVAVLFILAVASIGIYGVVLAGWSSAG 150
Query: 384 NYALLGGLRSVAQTISYEV 440
Y+LLG LRS AQ ISYEV
Sbjct: 151 TYSLLGSLRSSAQMISYEV 169
Score = 42.7 bits (96), Expect = 0.009
Identities = 20/37 (54%), Positives = 24/37 (64%)
Frame = +3
Query: 582 ETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEY 692
E+NR PFD E E ELVSG+ EY + + FLAEY
Sbjct: 229 ESNRLPFDLPECESELVSGYITEYSGFPYGMYFLAEY 265
>UniRef50_Q70VA3 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=1; Cotesia anisotae|Rep: NADH-ubiquinone
oxidoreductase chain 1 - Cotesia anisotae
Length = 129
Score = 73.7 bits (173), Expect = 4e-12
Identities = 34/79 (43%), Positives = 50/79 (63%)
Frame = +3
Query: 204 SNYFCYYFSPVFRFIXXXXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNS 383
S+ Y SP F P+ N + F+ +L+F L S GVY +I+AGWSSNS
Sbjct: 1 SSXXXYXXSPSXXFXLIXMIWMIYPFXTNXLMFDYSVLYFXXLMSXGVYSLILAGWSSNS 60
Query: 384 NYALLGGLRSVAQTISYEV 440
+++++G +RS+AQ+ISYEV
Sbjct: 61 SFSMIGSIRSIAQSISYEV 79
>UniRef50_O79095 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=12; Braconidae|Rep: NADH-ubiquinone oxidoreductase
chain 1 - Cotesia congregata (Parasitoid wasp)
Length = 135
Score = 72.1 bits (169), Expect = 1e-11
Identities = 33/79 (41%), Positives = 48/79 (60%)
Frame = +3
Query: 204 SNYFCYYFSPVFRFIXXXXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNS 383
S++ Y SP FI P+ NL+ F +L+FLCL SLGVY +I+AGWSSNS
Sbjct: 1 SSFDLYIASPSIMFILIMMLWMIYPFSSNLLMFENSMLYFLCLMSLGVYGLILAGWSSNS 60
Query: 384 NYALLGGLRSVAQTISYEV 440
+++++G + + SYEV
Sbjct: 61 SFSMIGAIAQLLNQFSYEV 79
>UniRef50_A1ALP6 Cluster: Respiratory-chain NADH dehydrogenase,
subunit 1; n=1; Pelobacter propionicus DSM 2379|Rep:
Respiratory-chain NADH dehydrogenase, subunit 1 -
Pelobacter propionicus (strain DSM 2379)
Length = 389
Score = 63.7 bits (148), Expect(2) = 2e-11
Identities = 41/149 (27%), Positives = 62/149 (41%), Gaps = 7/149 (4%)
Frame = +3
Query: 279 YIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVAQTISYEVRXXXXX 458
Y+ + + GIL L ++ +G+ ++AGWSSN+ ++LLG R+ +Q ISYEV
Sbjct: 139 YVMQVARLDAGILVILAISGIGILGTMLAGWSSNNKFSLLGAARAASQMISYEVSMGLAL 198
Query: 459 XXXXXXXXXXXXYFFYLYQE-------XXXXXXXXXXXXXXXXXXXXAETNRTPFDFAEG 617
++Q AE R PFD E
Sbjct: 199 ISLVVTYGTLDLNDMVVWQSGLLFGVLPAWGIILQPLAFVLFLTACIAENKRVPFDLPEC 258
Query: 618 ERELVSGFNIEYRRGGFALIFLAEYSSIL 704
E ELVSG+ EY + L+E+ I+
Sbjct: 259 ESELVSGYFTEYTAMKMGIFMLSEFIEIV 287
Score = 28.3 bits (60), Expect(2) = 2e-11
Identities = 16/62 (25%), Positives = 25/62 (40%)
Frame = +3
Query: 96 YIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFIXXXXXXXXI 275
Y++I K+ GL+ +D K+ KE P + FCY +P I
Sbjct: 47 YLRIPFTNVKIVAWGLIHGIADGSKMLLKENFTPTTYDRFCYNLAPWLALAPVLLVFSAI 106
Query: 276 PY 281
P+
Sbjct: 107 PF 108
>UniRef50_Q9F2V9 Cluster: NADH dehydrogenase subunit NuoH2; n=5;
Actinomycetales|Rep: NADH dehydrogenase subunit NuoH2 -
Streptomyces coelicolor
Length = 322
Score = 71.7 bits (168), Expect = 2e-11
Identities = 58/216 (26%), Positives = 89/216 (41%), Gaps = 7/216 (3%)
Frame = +3
Query: 78 ERKVLGYIQIRKGPNKVG-FIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFIXX 254
E KV+ ++Q R GP G F G Q +D +K KE P ++ + +P +
Sbjct: 29 EHKVMAHMQGRLGPMYAGGFHGWAQLVADGVKFAQKEDVVPADADRRIFQLAPAVALLPY 88
Query: 255 XXXXXXIPY------IFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSV 416
IP + ++ + G+ F L + +GV ++AGWSS + ++LLGGLR+
Sbjct: 89 LLVLLAIPVGPGEGAVGQVV--DAGVFFVLAVMGVGVLGSLMAGWSSANKFSLLGGLRTA 146
Query: 417 AQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNRT 596
AQ ++YE+ L AE R
Sbjct: 147 AQLLAYEL-PMLLTAASVAMAAGTVSLVGILDAFEWWWLPWQIVGAIVFFVAGLAELQRP 205
Query: 597 PFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSIL 704
PFD + E++ G EY FAL LAEY+ I+
Sbjct: 206 PFDMPVADSEIIFGAYTEYTGLRFALFLLAEYAGIV 241
>UniRef50_Q5YBJ8 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=1; Spathius sp. MS-2004|Rep: NADH-ubiquinone
oxidoreductase chain 1 - Spathius sp. MS-2004
Length = 132
Score = 70.9 bits (166), Expect = 3e-11
Identities = 31/73 (42%), Positives = 48/73 (65%)
Frame = +3
Query: 222 YFSPVFRFIXXXXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLG 401
+ +P+ F P+ + LI L L FL L S+G+Y ++I+GWSSNS++++LG
Sbjct: 18 FIAPLIMFTLIMSMWMIYPFFYQLINIPLNSLLFLSLMSMGIYGLMISGWSSNSSFSMLG 77
Query: 402 GLRSVAQTISYEV 440
+RS+AQ+ISYEV
Sbjct: 78 SIRSIAQSISYEV 90
>UniRef50_Q6LE55 Cluster: NADH ubiquinone oxidoreductase subunit;
n=3; Cystobacterineae|Rep: NADH ubiquinone
oxidoreductase subunit - Myxococcus xanthus
Length = 432
Score = 69.7 bits (163), Expect = 6e-11
Identities = 47/146 (32%), Positives = 70/146 (47%), Gaps = 21/146 (14%)
Frame = +3
Query: 66 LTLLERKVLGYIQIRKGPNKVGFI----------GLLQPFSDAIKLFTKERTYPNFSNYF 215
LT+ ERK +IQ R GPN+ GL +D +K+ TKE P +N F
Sbjct: 60 LTMAERKWSAFIQDRMGPNRGPHRPARPEERPLGGLPHILTDVLKMLTKEDLIPAAANRF 119
Query: 216 CYYFSPVFRFIXXXXXXXXIPYIFNLICF-----------NLGILFFLCLTSLGVYIVII 362
+ P+ F +P ++ F + G L+ L + SL VY +
Sbjct: 120 MFNLGPILAFAPTFALFAVVPAGPSVQVFGRNVDMVVATPDFGALYVLAIASLAVYGTAL 179
Query: 363 AGWSSNSNYALLGGLRSVAQTISYEV 440
AGW+SN+ + LLGG+R+ +Q I+YEV
Sbjct: 180 AGWASNNKFGLLGGVRATSQMIAYEV 205
Score = 34.3 bits (75), Expect = 3.0
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +3
Query: 582 ETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSIL 704
ET R PFD GE E++ G+ +EY F L ++E+ ++
Sbjct: 276 ETKRAPFDLPGGESEII-GYFVEYSCMKFGLFMISEFVEVV 315
>UniRef50_A0RY69 Cluster: NADH-ubiquinone oxidoreductase, subunit H;
n=2; Thermoprotei|Rep: NADH-ubiquinone oxidoreductase,
subunit H - Cenarchaeum symbiosum
Length = 432
Score = 69.7 bits (163), Expect = 6e-11
Identities = 51/209 (24%), Positives = 85/209 (40%), Gaps = 3/209 (1%)
Frame = +3
Query: 75 LERKVLGYIQIRKGPNKVGFI-GLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFIX 251
+ERK+L +Q+R GP G + GLLQ D +KL +KE P ++ + +P+
Sbjct: 102 VERKMLAKLQLRVGPFYCGKVEGLLQLMGDGLKLISKEIIIPAKADKPIFIAAPILFVGT 161
Query: 252 XXXXXXXIPYIFNLIC--FNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVAQT 425
IP + ++G++ + I I++ WS+NS + +GG+R++ Q
Sbjct: 162 AAAFVALIPVAPGWVVADVDMGLIGVFAVIGFFPIITILSAWSANSKFPFIGGIRALHQM 221
Query: 426 ISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNRTPFD 605
+S+E+ Q AE R PFD
Sbjct: 222 VSFEIPLILSCLGVVILTGTFNLSEIAASQSFFPWIVFLPIGAIVFIICALAELERIPFD 281
Query: 606 FAEGERELVSGFNIEYRRGGFALIFLAEY 692
E E E+V+G+ E + L+ L Y
Sbjct: 282 LPEAESEIVAGWLTELSGMMYGLVQLGSY 310
>UniRef50_A3E7R3 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=16; Coelomata|Rep: NADH-ubiquinone oxidoreductase
chain 1 - Nyctalus leisleri (Leisler's bat)
Length = 299
Score = 69.3 bits (162), Expect = 9e-11
Identities = 41/105 (39%), Positives = 46/105 (43%)
Frame = +3
Query: 390 ALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXX 569
AL+G L QT YEV QE
Sbjct: 128 ALIGALXXXXQTXXYEVTLAIIILSILLMNGSFTLSTLITTQEYTWLILPSWPLAMMWFI 187
Query: 570 XXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSIL 704
AETNR PFD EGE ELVSGFN+EY G FAL FLAEY++I+
Sbjct: 188 STLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANII 232
Score = 47.2 bits (107), Expect = 4e-04
Identities = 21/24 (87%), Positives = 23/24 (95%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVG 131
AFLTLLERKVLGY+Q+RKGPN VG
Sbjct: 18 AFLTLLERKVLGYMQLRKGPNIVG 41
>UniRef50_UPI00015BB094 Cluster: NADH dehydrogenase (quinone); n=1;
Ignicoccus hospitalis KIN4/I|Rep: NADH dehydrogenase
(quinone) - Ignicoccus hospitalis KIN4/I
Length = 355
Score = 66.5 bits (155), Expect = 6e-10
Identities = 63/240 (26%), Positives = 93/240 (38%), Gaps = 29/240 (12%)
Frame = +3
Query: 75 LERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFIXX 254
+ERK+ G I R GP VG+ GLLQ +D +K +KE P N YY P+
Sbjct: 32 MERKMWGKIMQRYGPTHVGYAGLLQLIADFLKYLSKELFAPRRPNKLFYYGLPLLLIAII 91
Query: 255 XXXXXXIPY----------IFNLICFNLGILFFLCLTSL-----GV----YIVIIA---- 365
IP + L N+ + + L GV Y+ ++A
Sbjct: 92 SIPLVLIPLDYVALSGLEGLLKLAGINVNLSDYAASKLLDELAPGVGLLGYVAVVAVTMP 151
Query: 366 -----GWSSNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXX 530
W+ + Y LG R+V ++YEV Y +Q+
Sbjct: 152 LMYMLSWNQANKYGALGAFRTVLLLVTYEV-PFLIAIAAVAALGGLSFYGVVDFQKSAWL 210
Query: 531 XXXXXXXXXXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIF-LAEYSSILF 707
AE+ R PFD E E+E+V G+N+EY G F L++ L Y+ L+
Sbjct: 211 ALLNPIAALVLFITLLAESERPPFDHPEAEQEIVHGWNVEYGAGEFILLYGLYLYTKALY 270
>UniRef50_A3E7R8 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=6; Microchiroptera|Rep: NADH-ubiquinone oxidoreductase
chain 1 - Hypsugo sp. FFM-2006A
Length = 300
Score = 65.7 bits (153), Expect = 1e-09
Identities = 29/42 (69%), Positives = 33/42 (78%)
Frame = +3
Query: 579 AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSIL 704
AETNR PFD EGE ELVSGFN+EY G FAL LAEY++I+
Sbjct: 191 AETNRAPFDLTEGESELVSGFNVEYAGGSFALFXLAEYANII 232
Score = 62.1 bits (144), Expect = 1e-08
Identities = 30/46 (65%), Positives = 33/46 (71%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYP 197
AFLTLLER GY + R GPN VG GLLQP +DA+KLFTKE P
Sbjct: 18 AFLTLLERXXXGYXRXRXGPNIVGPYGLLQPIADAVKLFTKEPLQP 63
>UniRef50_A1RZ42 Cluster: Respiratory-chain NADH dehydrogenase,
subunit 1; n=1; Thermofilum pendens Hrk 5|Rep:
Respiratory-chain NADH dehydrogenase, subunit 1 -
Thermofilum pendens (strain Hrk 5)
Length = 322
Score = 64.1 bits (149), Expect = 3e-09
Identities = 56/214 (26%), Positives = 81/214 (37%), Gaps = 3/214 (1%)
Frame = +3
Query: 75 LERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFIXX 254
LERKV IQ R GP G GLLQP D KL KE P +++ F + +P+
Sbjct: 27 LERKVTARIQRRVGPLYAGPHGLLQPVYDFFKLLLKEEIVPGWTDVFTFRVAPILAVTIP 86
Query: 255 XXXXXXIPYIF--NLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVAQTI 428
+P L+ F L +LGV + + G+S S Y +G R + Q
Sbjct: 87 VFGMCVLPVASTKGLLSFEGDFALVFLLLALGVLTLSLTGYSVLSPYTAIGVGRLLVQYS 146
Query: 429 SYEVRXXXXXXXXXXXXXXXXXYFFYLYQE-XXXXXXXXXXXXXXXXXXXXAETNRTPFD 605
YE YQE A+ + PFD
Sbjct: 147 MYEGVFLLSLASAALQAKTMSFEGILAYQESHGFLGLYQPVSLAAALVALLAKLEKRPFD 206
Query: 606 FAEGERELVSGFNIEYRRGGFALIFLAEYSSILF 707
++E+V+G+ E G A + L E S+++
Sbjct: 207 LPHAKQEVVAGWMTELSGRGLAFMRLYEDLSMVW 240
>UniRef50_A6Q8J6 Cluster: NADH-quinone oxidoreductase, chain H; n=2;
Epsilonproteobacteria|Rep: NADH-quinone oxidoreductase,
chain H - Sulfurovum sp. (strain NBC37-1)
Length = 317
Score = 63.7 bits (148), Expect = 4e-09
Identities = 47/210 (22%), Positives = 81/210 (38%), Gaps = 2/210 (0%)
Frame = +3
Query: 81 RKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFIXXXX 260
RK + + R GP+ G G Q D KL +KE P N + + P+ I
Sbjct: 28 RKFMAPLHKRVGPHFNGLAGSYQTLFDLSKLLSKESITPEGVNPYLFSMMPLIALIVAML 87
Query: 261 XXXXIPYI--FNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVAQTISY 434
IP+ + I G+L + L + +++ + G+ S++ Y+ LGG+R + Q IS
Sbjct: 88 PAAFIPWTASYPAIPSAFGLLALIVLIGIEPFLLFLTGFGSDNKYSFLGGIRVLTQAISM 147
Query: 435 EVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNRTPFDFAE 614
E + + + PF+ +
Sbjct: 148 ETAFFLAALSPALLFGTMDLKII-VEETSWLSVLILLPAFFLYFIALLGLLEQPPFNIPD 206
Query: 615 GERELVSGFNIEYRRGGFALIFLAEYSSIL 704
E+E+V GF EY + L+ +AE+S +
Sbjct: 207 AEQEIVYGFYTEYSGTNYFLLKMAEFSEFM 236
>UniRef50_A7CUF6 Cluster: NADH dehydrogenase; n=1; Opitutaceae
bacterium TAV2|Rep: NADH dehydrogenase - Opitutaceae
bacterium TAV2
Length = 400
Score = 62.9 bits (146), Expect = 7e-09
Identities = 48/156 (30%), Positives = 72/156 (46%), Gaps = 29/156 (18%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGF---------------IGLLQPFSDAIKLFTKERTY 194
A ++ ERK+ +IQ R GPN+ G++Q +D K KE
Sbjct: 34 AACSMAERKIAAWIQDRPGPNRTATPLLMWIPILGPLLKRFGVMQLMADGGKFLFKEDPV 93
Query: 195 PNFSNYFCYYFSPVFRFIXXXXXXXXIP---YIFN-----------LICFNLGILFFLCL 332
P F + +P+ I +P YI N L ++G+L +
Sbjct: 94 PAFVEKLYFIAAPIVAMIPALCTVVIVPFSAYIANINGTPTLVPVMLANVDVGLLAVFAV 153
Query: 333 TSLGVYIVIIAGWSSNSNYALLGGLRSVAQTISYEV 440
+SL VY I+AGW+S+S Y+ LGG+R+ AQ ISYE+
Sbjct: 154 SSLAVYSQILAGWASHSKYSFLGGVRASAQIISYEL 189
Score = 42.3 bits (95), Expect = 0.011
Identities = 20/42 (47%), Positives = 27/42 (64%)
Frame = +3
Query: 579 AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSIL 704
AETNR PFD E E +LV+ F EY ++L ++AEY +L
Sbjct: 259 AETNRQPFDTIESEADLVNSFASEYGAYKWSLFYVAEYCHML 300
>UniRef50_Q60IJ1 Cluster: Putative uncharacterized protein CBG24965;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG24965 - Caenorhabditis
briggsae
Length = 312
Score = 62.9 bits (146), Expect = 7e-09
Identities = 43/127 (33%), Positives = 59/127 (46%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVF 239
AF+TL ER +LG Q R GP KV F+GL Q D +KL KE+ P S+ + PV
Sbjct: 3 AFITLYERHLLGRSQNRLGPTKVTFMGLAQALLDGVKLLKKEQITPLNSSEVSFLLVPVL 62
Query: 240 RFIXXXXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVA 419
F+ CL VY ++ G S S Y ++G +R+
Sbjct: 63 FFL--------------------------CLIGFSVYTTLVRGIVSKSKYGMIGAIRARR 96
Query: 420 QTISYEV 440
Q+ISYE+
Sbjct: 97 QSISYEI 103
Score = 55.6 bits (128), Expect = 1e-06
Identities = 23/39 (58%), Positives = 30/39 (76%)
Frame = +3
Query: 579 AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYS 695
AE NR PFDF+EGE ELVSG+N+E+ F L+FL ++S
Sbjct: 124 AELNRAPFDFSEGESELVSGYNVEFASVAFVLLFLRDFS 162
>UniRef50_Q09KP1 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=9; Digenea|Rep: NADH-ubiquinone oxidoreductase chain 1
- Opisthorchis viverrini
Length = 226
Score = 62.5 bits (145), Expect = 1e-08
Identities = 39/132 (29%), Positives = 57/132 (43%)
Frame = +3
Query: 297 CFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXX 476
C ++ +L+ L +TSL Y V+ GW S + +AL+ +RS ++++E
Sbjct: 31 CNSVMLLWLLLVTSLTGYSVLSIGWGSYNKFALISCVRSAFSSVTFEACFMCVIVICALV 90
Query: 477 XXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNRTPFDFAEGERELVSGFNIEYR 656
F L +E E NRTP D+AE E ELVSG + EY
Sbjct: 91 CGNYGS--FVLLEEFWGVGLVVPVCYVVWLVGMLCECNRTPLDYAEAESELVSGLSTEYC 148
Query: 657 RGGFALIFLAEY 692
F +F EY
Sbjct: 149 NVPFTCLFACEY 160
>UniRef50_A7H9V7 Cluster: NADH dehydrogenase (Quinone) precursor;
n=2; Anaeromyxobacter|Rep: NADH dehydrogenase (Quinone)
precursor - Anaeromyxobacter sp. Fw109-5
Length = 450
Score = 59.3 bits (137), Expect = 9e-08
Identities = 48/154 (31%), Positives = 70/154 (45%), Gaps = 27/154 (17%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQ---PF--SDAIKLFTKERTYPN------FS 206
+ LT+ ERK IQ R G N++ +G PF +DA+K+ TKE P F
Sbjct: 66 SLLTVAERKWSAMIQNRIGANRIRVMGSALGGIPFLAADALKMLTKESAEPRGRTRVLFE 125
Query: 207 NYFCYYFSPVFRFIXXXXXXXXIPY----------------IFNLICFNLGILFFLCLTS 338
F+PVF IP + + G+L+ ++S
Sbjct: 126 LAPALAFAPVFALFAIIPVGPSIPLGSLVDGAAGALGSAGVALQVASIDAGLLYIFAISS 185
Query: 339 LGVYIVIIAGWSSNSNYALLGGLRSVAQTISYEV 440
L VY +AGW+SN+ LLGG+R+ +Q +SYEV
Sbjct: 186 LAVYGTSLAGWASNNKLGLLGGVRASSQMMSYEV 219
Score = 43.2 bits (97), Expect = 0.006
Identities = 21/42 (50%), Positives = 27/42 (64%)
Frame = +3
Query: 579 AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSIL 704
AET R PFD EGE E+V G+ +EY F L+FL E+ I+
Sbjct: 273 AETKRAPFDLPEGESEIV-GYFVEYSGMRFGLMFLGEFVEIV 313
>UniRef50_A3MXU6 Cluster: Respiratory-chain NADH dehydrogenase,
subunit 1 precursor; n=3; Pyrobaculum|Rep:
Respiratory-chain NADH dehydrogenase, subunit 1
precursor - Pyrobaculum calidifontis (strain JCM 11548 /
VA1)
Length = 324
Score = 58.0 bits (134), Expect = 2e-07
Identities = 51/209 (24%), Positives = 77/209 (36%), Gaps = 4/209 (1%)
Frame = +3
Query: 78 ERKVLGYIQIRKGPNKVG--FIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFIX 251
ERK++ +Q R GP V G LQP +D IKL E P +N + +P+ F+
Sbjct: 32 ERKLVARVQWRYGPLYVSKPLGGFLQPIADLIKLVFSELVLPRHTNRHLFALTPLLLFVA 91
Query: 252 XXXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAG--WSSNSNYALLGGLRSVAQT 425
I L+ F+ L + + + V + G W+ + +G +R + T
Sbjct: 92 EAVPVVFIAVAPGLVIFHHSYGLALAVVTWLLIPVFLVGMAWAEADKFTYIGAVREILLT 151
Query: 426 ISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNRTPFD 605
+YEV Y + ++ T R PF+
Sbjct: 152 AAYEVPLLLSVLAMFILYGTADPY-AVVERQSLWGVLLNPLAFLAFYISLAMSTTRFPFE 210
Query: 606 FAEGERELVSGFNIEYRRGGFALIFLAEY 692
E E E+V G EY F L F A Y
Sbjct: 211 IPEAEPEVVLGPYTEYGSTLFILSFGANY 239
>UniRef50_Q34148 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=1; Celastrina ladon|Rep: NADH-ubiquinone
oxidoreductase chain 1 - Celastrina ladon (Spring azure)
Length = 62
Score = 57.2 bits (132), Expect = 4e-07
Identities = 24/30 (80%), Positives = 29/30 (96%)
Frame = +3
Query: 60 AFLTLLERKVLGYIQIRKGPNKVGFIGLLQ 149
AFLTL+ERK+L Y+QIRKGPNKVGF+G+LQ
Sbjct: 21 AFLTLMERKILSYMQIRKGPNKVGFMGMLQ 50
>UniRef50_Q4Z0A0 Cluster: Putative uncharacterized protein; n=2;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 80
Score = 56.4 bits (130), Expect = 6e-07
Identities = 28/41 (68%), Positives = 30/41 (73%)
Frame = -3
Query: 700 ILEYSAKKIKANPPLLYSILNPETNSLSPSAKSKGVRFVSA 578
+L YSA K AN P YS LNP+TNS SPS KSKG RFVSA
Sbjct: 10 MLVYSAMKNNANGPAAYSTLNPDTNSDSPSVKSKGARFVSA 50
>UniRef50_Q2WGD5 Cluster: NADH dehydrogenase subunit 1; n=1;
Selaginella uncinata|Rep: NADH dehydrogenase subunit 1 -
Selaginella uncinata (Blue spikemoss) (Peacock
spikemoss)
Length = 331
Score = 56.0 bits (129), Expect = 9e-07
Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 2/124 (1%)
Frame = +3
Query: 75 LERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFIXX 254
LERK+ IQ R GP G +G++Q +D +K KE P+ + + + P
Sbjct: 9 LERKISAGIQQRIGPGYAGPLGIIQALADGVKPLFKEDIIPSKGDPWSFSIGPAMVIAPV 68
Query: 255 XXXXXXIPYIFNLICFN--LGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVAQTI 428
IP +++ + G+ + +S+ + G+ SN+ Y+ GG R+ AQ+
Sbjct: 69 PVGHSVIPSGHSIVLADPGTGVPSRIAASSIAPLGPPMTGYGSNNKYSFSGGPRAAAQST 128
Query: 429 SYEV 440
SYE+
Sbjct: 129 SYEI 132
>UniRef50_A3H7X8 Cluster: Respiratory-chain NADH dehydrogenase,
subunit 1; n=1; Caldivirga maquilingensis IC-167|Rep:
Respiratory-chain NADH dehydrogenase, subunit 1 -
Caldivirga maquilingensis IC-167
Length = 361
Score = 56.0 bits (129), Expect = 9e-07
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 4/130 (3%)
Frame = +3
Query: 63 FLTLLERKVLGYIQIRKGPNKVG--FIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPV 236
F+ ERK +Q R GP ++ G++QP SD I+ +E ++ + PV
Sbjct: 56 FVIWWERKAAARVQWRYGPLEISRRIGGVIQPISDLIRYTLQEIIIHQEADEAYFLHMPV 115
Query: 237 FRFIXXXXXXXXIPYIFNLICFNLG--ILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLR 410
F FI +P ++ N G IL L S+ ++I++GW+S +A +G +R
Sbjct: 116 FGFIFALLPVLFLPAGPHVYAINTGYNILIAAVLISIFNIVIIVSGWASTDKWAYIGTVR 175
Query: 411 SVAQTISYEV 440
+YEV
Sbjct: 176 EAFMYAAYEV 185
>UniRef50_A1AUU5 Cluster: Respiratory-chain NADH dehydrogenase,
subunit 1 precursor; n=2; Pelobacter propionicus DSM
2379|Rep: Respiratory-chain NADH dehydrogenase, subunit
1 precursor - Pelobacter propionicus (strain DSM 2379)
Length = 313
Score = 55.6 bits (128), Expect = 1e-06
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 2/123 (1%)
Frame = +3
Query: 78 ERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFIXXX 257
+RK+ +Q R+GP QPF+D IKL +KE P ++ F + P+
Sbjct: 28 DRKLYARMQNRQGPP------WFQPFADFIKLSSKEDIIPEEADPFMFRLMPLVALAASV 81
Query: 258 XXXXXIPYIFN--LICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVAQTIS 431
IP L+ F ++ + L ++ +AGW S S Y+++G +RS+ Q ++
Sbjct: 82 CAILYIPIWGRGALLSFEGDLVIVVYLLTIPTMTFFLAGWYSASLYSMIGAVRSLTQLLA 141
Query: 432 YEV 440
YEV
Sbjct: 142 YEV 144
>UniRef50_P19040 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=1; Artemia salina|Rep: NADH-ubiquinone oxidoreductase
chain 1 - Artemia salina (Brine shrimp)
Length = 130
Score = 55.2 bits (127), Expect = 1e-06
Identities = 30/47 (63%), Positives = 34/47 (72%), Gaps = 4/47 (8%)
Frame = +3
Query: 579 AETNRTPFDFAEGERELVSGFNIEYRRG--GFALIFL--AEYSSILF 707
AETNRTPFD AEGE ++ GFN EY GFALI L +EY+SILF
Sbjct: 2 AETNRTPFDLAEGECQVSVGFNTEYMHSSVGFALIMLSESEYASILF 48
>UniRef50_Q9XMH4 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=1; Lysiphlebus fabarum|Rep: NADH-ubiquinone
oxidoreductase chain 1 - Lysiphlebus fabarum
Length = 115
Score = 54.8 bits (126), Expect = 2e-06
Identities = 25/35 (71%), Positives = 28/35 (80%)
Frame = +3
Query: 603 DFAEGERELVSGFNIEYRRGGFALIFLAEYSSILF 707
D +EGE ELVSGFNIEY F LIFLAEY+SI+F
Sbjct: 1 DLSEGESELVSGFNIEYSNSKFILIFLAEYTSIIF 35
>UniRef50_A1RZ51 Cluster: Respiratory-chain NADH dehydrogenase,
subunit 1; n=1; Thermofilum pendens Hrk 5|Rep:
Respiratory-chain NADH dehydrogenase, subunit 1 -
Thermofilum pendens (strain Hrk 5)
Length = 337
Score = 54.8 bits (126), Expect = 2e-06
Identities = 45/196 (22%), Positives = 76/196 (38%), Gaps = 4/196 (2%)
Frame = +3
Query: 78 ERKVLGYIQIRKGPNKVG--FIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFIX 251
ERK+ +Q+R GP V F G+LQ +D + +E P ++ Y +P
Sbjct: 39 ERKIAARVQMRVGPLYVTRHFGGVLQMLADGTRYMFQEFIVPETADKVPYMLAPALALTL 98
Query: 252 XXXXXXXIPYI--FNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVAQT 425
IP F + + L + + V++ GWSSN+ +++ G +R T
Sbjct: 99 AIAPFALIPSAPGFAPVKSPYSLPALLAILASTPLSVLLMGWSSNNKFSIQGAVREAFMT 158
Query: 426 ISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNRTPFD 605
++YEV + ++ + R PFD
Sbjct: 159 LAYEVPLFLSALSMAILYGSMDLEEI-VGRQFLPGALLNPVAAFTFFVAMVMSSGRLPFD 217
Query: 606 FAEGERELVSGFNIEY 653
EGE+E+V+G +EY
Sbjct: 218 IVEGEQEIVAGPYVEY 233
>UniRef50_A3DJU0 Cluster: Respiratory-chain NADH dehydrogenase,
subunit 1; n=2; cellular organisms|Rep:
Respiratory-chain NADH dehydrogenase, subunit 1 -
Clostridium thermocellum (strain ATCC 27405 / DSM 1237)
Length = 291
Score = 54.4 bits (125), Expect = 3e-06
Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 2/126 (1%)
Frame = +3
Query: 66 LTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRF 245
LT ++R + +Q RKGP+ +LQPF D +KLF KE N + F Y S +F
Sbjct: 25 LTGIDRVITARMQGRKGPS------VLQPFYDVLKLFQKESIEVNTMHRFFVYISLIF-- 76
Query: 246 IXXXXXXXXIPYIFNLICFNLG--ILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVA 419
IF + LG IL L +LG ++ G++SNS Y+ +G R +
Sbjct: 77 -----------VIFTTVIMLLGGDILLALFALTLGSIFFVLGGYASNSPYSTIGSERELL 125
Query: 420 QTISYE 437
Q +++E
Sbjct: 126 QMMAFE 131
>UniRef50_O28444 Cluster: F420H2:quinone oxidoreductase, 41.2 kDa
subunit, putative; n=4; Archaea|Rep: F420H2:quinone
oxidoreductase, 41.2 kDa subunit, putative -
Archaeoglobus fulgidus
Length = 369
Score = 54.4 bits (125), Expect = 3e-06
Identities = 48/216 (22%), Positives = 79/216 (36%), Gaps = 3/216 (1%)
Frame = +3
Query: 63 FLTLLERKVLGYIQIRKGPNKVG--FIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPV 236
++ ERK+ IQ R GP +V G +Q +D I+ F +E ++ + P+
Sbjct: 69 YIVWYERKLTARIQWRVGPLEVARPIRGAIQALADGIRYFFQEAIVHREAHRPYFVQLPI 128
Query: 237 FRFIXXXXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIA-GWSSNSNYALLGGLRS 413
FI IP + + + + I I+A GW+SNS +A +G +R
Sbjct: 129 LAFIPVLLPIMFIPAGSAVGIYTPNAIQLTVTFIALIPITIVAIGWASNSRFAYIGSVRE 188
Query: 414 VAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNR 593
+YEV Y Q T+R
Sbjct: 189 AFMYFAYEVPFIIAVISMIFLYGSGDAYVAVEKQSAIPGALLNPIAFIVYLIAMLMATSR 248
Query: 594 TPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSI 701
PF+ E ++E+ G +EY F L+ + Y +
Sbjct: 249 LPFEIPEADQEIAFGPFVEYSGILFGLVMVLAYEKL 284
>UniRef50_Q5V276 Cluster: NADH dehydrogenase/oxidoreductase; n=4;
Halobacteriaceae|Rep: NADH dehydrogenase/oxidoreductase
- Haloarcula marismortui (Halobacterium marismortui)
Length = 347
Score = 53.6 bits (123), Expect = 5e-06
Identities = 33/123 (26%), Positives = 62/123 (50%), Gaps = 2/123 (1%)
Frame = +3
Query: 78 ERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFIXXX 257
+RK+ R +++G GL +DA++L +KE P + + +P+
Sbjct: 51 KRKITAAFTDRIAVDRIGPYGLFIIVADAVRLLSKELIVPEGVDRPAWDLAPLIIASTAL 110
Query: 258 XXXXXIPYI--FNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVAQTIS 431
IP +L +G+ + + S +++AG++SN+ Y+ LGGLR+VAQ ++
Sbjct: 111 LGFAVIPMGNGIHLADPEVGLAYVFAVASTTSIGLVMAGYASNNKYSFLGGLRAVAQNLA 170
Query: 432 YEV 440
YE+
Sbjct: 171 YEI 173
Score = 39.9 bits (89), Expect = 0.060
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = +3
Query: 579 AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSI 701
AE R PFD E E+V+G+ EY F LI+L E+ I
Sbjct: 227 AEVGRNPFDIPEAPTEIVAGYQTEYSSVYFVLIYLGEFIHI 267
>UniRef50_A7D3R6 Cluster: Respiratory-chain NADH dehydrogenase,
subunit 1; n=1; Halorubrum lacusprofundi ATCC 49239|Rep:
Respiratory-chain NADH dehydrogenase, subunit 1 -
Halorubrum lacusprofundi ATCC 49239
Length = 357
Score = 52.8 bits (121), Expect = 8e-06
Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 6/127 (4%)
Frame = +3
Query: 78 ERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFIXXX 257
+RK+ R N++G GLL + A++L KE P + + +P+
Sbjct: 52 KRKITAAFTDRIAVNRIGPFGLLIIPAAAVQLLAKELIIPEGVDRPTWDIAPILLPASAM 111
Query: 258 XXXXXIPY------IFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVA 419
IP +L +G+ S+ +++AG++SN+ Y+LLGGLR+VA
Sbjct: 112 LGFSVIPMGQIGPLNIHLADPEVGLALVFAFASIASVSLVMAGYASNNKYSLLGGLRAVA 171
Query: 420 QTISYEV 440
Q ++YE+
Sbjct: 172 QNLAYEI 178
Score = 38.7 bits (86), Expect = 0.14
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = +3
Query: 579 AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSI 701
AE R PFD E E+V G+ EY F L +L E+ I
Sbjct: 236 AEIGRNPFDIPEAPTEIVGGYQTEYSSAYFVLFYLGEFVHI 276
>UniRef50_Q94YW8 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=15; Digenea|Rep: NADH-ubiquinone oxidoreductase chain
1 - Steringophorus haedrichi
Length = 157
Score = 52.4 bits (120), Expect = 1e-05
Identities = 30/108 (27%), Positives = 55/108 (50%), Gaps = 4/108 (3%)
Frame = +3
Query: 126 VGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFIXXXXXXXXIPYIFNLICFN 305
VG +GLLQ F+D +KL K + + S + + + + + + C +
Sbjct: 1 VGIVGLLQSFADFLKLIIKVKLAGSQSRSWLSWGGVILLVFLSCAYC----FFYAVACLH 56
Query: 306 LG----ILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVAQTISYE 437
+G +L+FL +TS+ Y ++ GW S + YALL +RS ++++E
Sbjct: 57 IGGSNVLLWFLVITSITGYSLLAVGWGSYNKYALLSSIRSALGSVTFE 104
>UniRef50_A3DMA3 Cluster: Respiratory-chain NADH dehydrogenase,
subunit 1; n=1; Staphylothermus marinus F1|Rep:
Respiratory-chain NADH dehydrogenase, subunit 1 -
Staphylothermus marinus (strain ATCC 43588 / DSM 3639 /
F1)
Length = 330
Score = 50.8 bits (116), Expect = 3e-05
Identities = 39/128 (30%), Positives = 59/128 (46%), Gaps = 3/128 (2%)
Frame = +3
Query: 63 FLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFR 242
F + RKV G +Q R+GP VG GLLQPF+D +KL KE +S
Sbjct: 28 FTQWIYRKVTGRVQYRRGPTYVGPFGLLQPFADFMKLLLKEDVVSRYSAKIAPVIVAALG 87
Query: 243 FIXXXXXXXXIPYIFNLI--CFNLGILFFLCL-TSLGVYIVIIAGWSSNSNYALLGGLRS 413
P ++ + F++ + F+L L TSL ++ G ++ + Y LG R
Sbjct: 88 VGAITALTLMTPLAYDPVHAPFDIIVFFYLALWTSLS---IMFLGLATPNPYTSLGVGRY 144
Query: 414 VAQTISYE 437
+A +S E
Sbjct: 145 MALLVSAE 152
>UniRef50_P08834 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=45; Magnoliophyta|Rep: NADH-ubiquinone oxidoreductase
chain 1 - Citrullus lanatus (Watermelon) (Citrullus
vulgaris)
Length = 316
Score = 50.8 bits (116), Expect = 3e-05
Identities = 30/91 (32%), Positives = 36/91 (39%)
Frame = +3
Query: 381 SNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXX 560
S YA LG LRS AQ + YEV + Q+
Sbjct: 106 SKYAFLGALRSAAQMVPYEVSIGLILIVRLICVGPRNSSEIVMAQKQIWSGIPLFPVLVM 165
Query: 561 XXXXXXAETNRTPFDFAEGERELVSGFNIEY 653
AETNR PFD E E E V+G+N+EY
Sbjct: 166 FFISRLAETNRAPFDLPEAEAESVAGYNVEY 196
>UniRef50_A1RWL7 Cluster: Respiratory-chain NADH dehydrogenase,
subunit 1; n=1; Thermofilum pendens Hrk 5|Rep:
Respiratory-chain NADH dehydrogenase, subunit 1 -
Thermofilum pendens (strain Hrk 5)
Length = 312
Score = 49.6 bits (113), Expect = 7e-05
Identities = 49/209 (23%), Positives = 80/209 (38%), Gaps = 5/209 (2%)
Frame = +3
Query: 75 LERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKER-TYPNFSNYFCYYFSPVFRFIX 251
++RK++ +Q+RKGP ++QP+ D +KL++K++ + P S++ Y +P+
Sbjct: 26 IQRKIIARLQLRKGP------PVIQPYRDLLKLWSKDKLSVPEVSSWI-YMATPLLYLAI 78
Query: 252 XXXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVAQTIS 431
IP N+ I + +L +++ IA + S A G R A +
Sbjct: 79 TVVIAMSIPVFVNMGIPLADIFLLIYSLALARFVLSIASLDTGSPLAAAGAWRENAAAVV 138
Query: 432 YEVRXXXXXXXXXXXXXXXXXYFFY----LYQEXXXXXXXXXXXXXXXXXXXXAETNRTP 599
EV Y L E AE P
Sbjct: 139 IEVPMLFAALLPALEGGSSSLYAVVSHTCLRWETFIARPSYIVAALAFFVCMLAEAGVLP 198
Query: 600 FDFAEGERELVSGFNIEYRRGGFALIFLA 686
FD AE E+E+ G EY AL+ L+
Sbjct: 199 FDVAEAEQEIQEGLLQEYSGRQLALMQLS 227
>UniRef50_Q8PUL3 Cluster: Ech Hydrogenase, Subunit; n=3;
Methanosarcina|Rep: Ech Hydrogenase, Subunit -
Methanosarcina mazei (Methanosarcina frisia)
Length = 290
Score = 48.4 bits (110), Expect = 2e-04
Identities = 50/214 (23%), Positives = 80/214 (37%), Gaps = 3/214 (1%)
Frame = +3
Query: 75 LERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFIXX 254
++RK+ +Q R GP LLQP+ D KL +KE N S F VF +
Sbjct: 27 IDRKITARLQGRVGPP------LLQPYYDVRKLMSKENMIVNGSQNFYVVVYLVFIILSL 80
Query: 255 XXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVAQTISY 434
++ F +L + + ++ +I+ G S+ S YA +G R + +SY
Sbjct: 81 L-----------MLIFRADMLMIIFVYTVASLALIVGGMSTGSPYARVGSSREIMAILSY 129
Query: 435 EVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXAETNRTPFDFA- 611
E L + + ++PFD++
Sbjct: 130 E--PVLILYALAIYLVTGTFKVSALLEASTPLLIYTPLLFIAMIVVLNIKLKKSPFDYST 187
Query: 612 --EGERELVSGFNIEYRRGGFALIFLAEYSSILF 707
G +ELV G EY GFA I +A + +F
Sbjct: 188 SHHGHQELVKGMTTEYSGPGFATIEIAHFYEYVF 221
>UniRef50_Q980H2 Cluster: NADH dehydrogenase subunit H; n=4;
Sulfolobaceae|Rep: NADH dehydrogenase subunit H -
Sulfolobus solfataricus
Length = 352
Score = 48.0 bits (109), Expect = 2e-04
Identities = 45/148 (30%), Positives = 63/148 (42%), Gaps = 27/148 (18%)
Frame = +3
Query: 78 ERKVLGYIQIRKGPNKVG--FIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFIX 251
ERK +Q+R GP G+LQ F+DAIK E PN N Y SPV I
Sbjct: 39 ERKAAAIVQLRYGPYYASKRLGGILQLFADAIKFVFSEIIIPNGVNQTLYAISPVLVLIF 98
Query: 252 XXXXXXXIPY---------------IFNLICFNLGIL--FF--------LCLTSLGVYIV 356
IP IF + GIL +F + L SL +V
Sbjct: 99 AFLPMALIPISTIPTQGSILSVYHGIFYDTQIHQGILVPYFIEYNLIGIIALESLYPILV 158
Query: 357 IIAGWSSNSNYALLGGLRSVAQTISYEV 440
I W++N+ +A++G +R ++SY+V
Sbjct: 159 IFLAWNTNNRFAIVGSIREAYLSVSYDV 186
>UniRef50_Q8ZWX0 Cluster: NADH-ubiquinone oxidoreductase subunit;
n=4; Pyrobaculum|Rep: NADH-ubiquinone oxidoreductase
subunit - Pyrobaculum aerophilum
Length = 349
Score = 47.6 bits (108), Expect = 3e-04
Identities = 34/129 (26%), Positives = 52/129 (40%), Gaps = 8/129 (6%)
Frame = +3
Query: 78 ERKVLGYIQIRKGPNKVGFI--GLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFIX 251
ERK +Q+R GP V + G LQ +DA K E P ++ + + P
Sbjct: 39 ERKAAARVQMRVGPYHVSPLLGGYLQLLADAFKFIISEPIVPRGAHKVLFVWGPPIFVTL 98
Query: 252 XXXXXXXIPYIFNLICFN------LGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRS 413
+P L G +F L + L I++I GWS N+ +A +G R
Sbjct: 99 AFGASLLLPLTPELRLIKDAGLLPYGFVFSLVILLLVSIIIVIIGWSVNNKFAYIGAARE 158
Query: 414 VAQTISYEV 440
+YE+
Sbjct: 159 ALLVAAYEI 167
>UniRef50_Q9YC30 Cluster: NuoH homolog; n=1; Aeropyrum pernix|Rep:
NuoH homolog - Aeropyrum pernix
Length = 375
Score = 46.0 bits (104), Expect = 0.001
Identities = 31/130 (23%), Positives = 59/130 (45%), Gaps = 9/130 (6%)
Frame = +3
Query: 78 ERKVLGYIQIRKGPNKVG--FIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFIX 251
ERK +Q R GP GLL +D ++ ++ P +YF + +P+
Sbjct: 38 ERKAAARVQRRIGPYWASPRLGGLLHLVADMMRYMFQQVIIPRTVDYFPFLVAPIVGMAV 97
Query: 252 XXXXXXXIPYIFNLICFNL-------GILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLR 410
+P N + L +L L +++L +I+AGW++N+ + ++GG+R
Sbjct: 98 SILPFAVVPLTANPSYWPLPPGLMEYSLLLALAISTLPPIFLIVAGWAANNPFTIVGGVR 157
Query: 411 SVAQTISYEV 440
++YE+
Sbjct: 158 EAFIILAYEL 167
>UniRef50_A5FW44 Cluster: Formate hydrogenlyase subunit 4-like
protein; n=1; Acidiphilium cryptum JF-5|Rep: Formate
hydrogenlyase subunit 4-like protein - Acidiphilium
cryptum (strain JF-5)
Length = 317
Score = 43.2 bits (97), Expect = 0.006
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Frame = +3
Query: 138 GLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFIXXXXXXXXIPYIFN--LICFNLG 311
G+LQP+ D KLF K+ P +++ ++ +PV F IP + N L N+G
Sbjct: 41 GVLQPYRDLWKLFHKDIVVPETASWL-FWVTPVVAFTCMMTVPILIPVLTNYPLPLSNMG 99
Query: 312 -ILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRS 413
IL + +LG +++ +AG + S Y +G R+
Sbjct: 100 DILGGGLILTLGSFMITLAGLDTGSAYGGIGSSRA 134
>UniRef50_A4XJP3 Cluster: Respiratory-chain NADH dehydrogenase,
subunit 1; n=2; Clostridiales|Rep: Respiratory-chain
NADH dehydrogenase, subunit 1 - Caldicellulosiruptor
saccharolyticus (strain ATCC 43494 / DSM 8903)
Length = 286
Score = 42.7 bits (96), Expect = 0.009
Identities = 32/124 (25%), Positives = 55/124 (44%)
Frame = +3
Query: 66 LTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRF 245
LT ++RK+ +Q R GP +LQPF D KLF+KE + + + VF
Sbjct: 21 LTGIDRKITARMQNRFGPP------ILQPFYDLFKLFSKETIVVSSTQILYAFLFLVFNM 74
Query: 246 IXXXXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVAQT 425
+ + + +L L + + V +I+ S+NS Y+ +G R +
Sbjct: 75 VALV-----------MFVLKMDLLLILFVLAFAVTALILGAMSTNSPYSRIGAHRELISV 123
Query: 426 ISYE 437
++YE
Sbjct: 124 LAYE 127
>UniRef50_P15576 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=20; Trypanosomatidae|Rep: NADH-ubiquinone
oxidoreductase chain 1 - Leishmania tarentolae
(Sauroleishmania tarentolae)
Length = 313
Score = 42.7 bits (96), Expect = 0.009
Identities = 20/40 (50%), Positives = 28/40 (70%)
Frame = +3
Query: 63 FLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTK 182
F++L ER++L +QIR GP + F G+L P +D IKLF K
Sbjct: 23 FVSLCERRILALVQIRIGP-ALCFFGILTPITDGIKLFIK 61
>UniRef50_Q8RDB7 Cluster: NADH:ubiquinone oxidoreductase subunit 1;
n=1; Thermoanaerobacter tengcongensis|Rep:
NADH:ubiquinone oxidoreductase subunit 1 -
Thermoanaerobacter tengcongensis
Length = 283
Score = 41.5 bits (93), Expect = 0.020
Identities = 33/125 (26%), Positives = 54/125 (43%)
Frame = +3
Query: 63 FLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFR 242
FL+ ++RK+ +IQ R GP + QPF D +KL K++ N F Y +
Sbjct: 21 FLSGIDRKLTAFIQGRYGPP------IWQPFYDIVKLLYKQKILVNNFQVFSAYMYLLTA 74
Query: 243 FIXXXXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVAQ 422
+ L +L L + S+G+ I S+ S Y+ +G R + Q
Sbjct: 75 ILS-----------VGLFAIKADLLMILFVMSVGLVFYIAGALSTKSPYSQVGAQRELMQ 123
Query: 423 TISYE 437
++YE
Sbjct: 124 MLAYE 128
>UniRef50_Q7WT81 Cluster: EchB; n=3; Desulfovibrio|Rep: EchB -
Desulfovibrio gigas
Length = 284
Score = 40.7 bits (91), Expect = 0.034
Identities = 33/124 (26%), Positives = 56/124 (45%)
Frame = +3
Query: 66 LTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRF 245
+T ++R++ +Q R GP +LQPF D KL KE+ N FC Y V
Sbjct: 24 ITGVDRRITARLQSRLGPP------ILQPFYDVAKLLGKEKLLNNSWQAFCAYVYLV--- 74
Query: 246 IXXXXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVAQT 425
+ + +L ++FF + ++G ++I S S Y+ +G R + Q
Sbjct: 75 ------AAATSVVLFFLQSDLLLIFF--VQAVGAVFLVIGAMSVPSPYSQIGAQRELIQV 126
Query: 426 ISYE 437
++YE
Sbjct: 127 LTYE 130
>UniRef50_Q7GEL5 Cluster: NDH-A protein; n=7; Magnoliophyta|Rep:
NDH-A protein - Hordeum vulgare (Barley)
Length = 178
Score = 40.7 bits (91), Expect = 0.034
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = +3
Query: 579 AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSIL 704
AE R PFD E E ELV+G+ EY + L +L Y ++L
Sbjct: 39 AECERLPFDLPEAEEELVAGYQTEYSGIKYGLFYLVSYLNLL 80
>UniRef50_P77937 Cluster: CooK; n=8; Bacteria|Rep: CooK -
Rhodospirillum rubrum
Length = 323
Score = 40.3 bits (90), Expect = 0.045
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 4/103 (3%)
Frame = +3
Query: 141 LLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFIXXXXXXXXIP----YIFNLICFNL 308
LLQPF D +KL TK P +N + P+ IP Y + +L
Sbjct: 50 LLQPFYDVLKLMTKRTLVPENANLVVFLMVPLLGLASMGVAAAMIPIPGLYDPSPAFGDL 109
Query: 309 GILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVAQTISYE 437
+LF+L S+ ++++AG +S S + +G R +A ++YE
Sbjct: 110 LVLFYLL--SVPAVMLMLAGSASGSPFGGIGFSREMAIMLAYE 150
>UniRef50_Q0W3I4 Cluster: Ech hydrogenase, subunit B; n=1;
uncultured methanogenic archaeon RC-I|Rep: Ech
hydrogenase, subunit B - Uncultured methanogenic
archaeon RC-I
Length = 306
Score = 40.3 bits (90), Expect = 0.045
Identities = 31/121 (25%), Positives = 54/121 (44%)
Frame = +3
Query: 75 LERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFIXX 254
++RK+ +Q R+GP ++QPF D KLF KE N N F ++
Sbjct: 37 IDRKLTARLQNRRGPP------IVQPFYDVFKLFGKE---DNVMNKAYLVFGLAYQ---- 83
Query: 255 XXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVAQTISY 434
+ L+ F +L + L +++AG+S S ++ +G R + Q ++Y
Sbjct: 84 ----TTVVLSLALLLFEYDLLVIAFVFGLSFIFLVLAGYSVRSQFSYIGSNRELLQMMTY 139
Query: 435 E 437
E
Sbjct: 140 E 140
>UniRef50_Q8THY9 Cluster: Hydrogenase-3 subunit; n=7; cellular
organisms|Rep: Hydrogenase-3 subunit - Methanosarcina
acetivorans
Length = 313
Score = 38.7 bits (86), Expect = 0.14
Identities = 36/117 (30%), Positives = 50/117 (42%), Gaps = 2/117 (1%)
Frame = +3
Query: 75 LERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFIXX 254
L RKV Y Q RKGP L Q + D KL KE Y S++ F+P
Sbjct: 26 LIRKVKAYAQWRKGPR------LFQVYYDLKKLMQKEAVYSPTSSW-VMRFTPYLNLSTL 78
Query: 255 XXXXXXIPYIF-NLICFNLG-ILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVA 419
+P IF LG I+ FL L +L + + G + S + +G RS++
Sbjct: 79 LVCSLFVPLIFVPEPAGGLGNIIVFLYLLALERFFTALGGLDAGSAFGGMGSSRSMS 135
>UniRef50_Q3JDU8 Cluster: Respiratory-chain NADH dehydrogenase,
subunit 1 precursor; n=2; Proteobacteria|Rep:
Respiratory-chain NADH dehydrogenase, subunit 1
precursor - Nitrosococcus oceani (strain ATCC 19707 /
NCIMB 11848)
Length = 310
Score = 37.9 bits (84), Expect = 0.24
Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = +3
Query: 219 YYFSPVFRFIXXXXXXXXIPYIFNLIC--FNLGILFFLCLTSLGVYIVIIAGWSSNSNYA 392
YY PV + IP+ +L+ N+G+ +F+ + V + + GW +N+ +
Sbjct: 57 YYAGPVIACMGVSWAMVCIPFSPSLVGNDVNIGLFYFIVVVDFVVLGIALGGWGANTPDS 116
Query: 393 LLGGLRSVAQTISYEV 440
+ R++AQ I+Y +
Sbjct: 117 VESCYRAIAQLIAYVI 132
>UniRef50_Q0FXV6 Cluster: NuoH2 NADH chain H; n=1; Fulvimarina
pelagi HTCC2506|Rep: NuoH2 NADH chain H - Fulvimarina
pelagi HTCC2506
Length = 305
Score = 37.9 bits (84), Expect = 0.24
Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Frame = +3
Query: 147 QPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFIXXXXXXXXIPYIFNLICF--NLGILF 320
+P +DA +L +R + ++ +PV IP+ L+ +GI+
Sbjct: 41 RPIADAARLLQTQRIRTEAPDALLWFLAPVLYLALAIIGLAVIPFGPGLVTIPSEVGIVV 100
Query: 321 FLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVA 419
+ +L + V + GWS+N+ L+G R VA
Sbjct: 101 WGSCEALTIVAVFMFGWSANAPLPLIGAYRYVA 133
>UniRef50_UPI00015BC866 Cluster: UPI00015BC866 related cluster; n=1;
unknown|Rep: UPI00015BC866 UniRef100 entry - unknown
Length = 305
Score = 37.5 bits (83), Expect = 0.32
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Frame = +3
Query: 141 LLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFIXXXXXXXXIPYIFN---LICFNLG 311
+LQP+ D IKLF KE ++ F +P+ + IP IF+ L+ F
Sbjct: 40 ILQPYKDLIKLFRKEPVISKDAS-FISKIAPIVVLLATIISASFIP-IFSPNTLLSFTGD 97
Query: 312 ILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSV 416
++ F+ + L + + + G S++ LG R +
Sbjct: 98 VIAFMYVLGLSTFFIALYGLDQGSSFGGLGSAREM 132
>UniRef50_A3Q532 Cluster: Respiratory-chain NADH dehydrogenase,
subunit 1 precursor; n=4; Actinomycetales|Rep:
Respiratory-chain NADH dehydrogenase, subunit 1
precursor - Mycobacterium sp. (strain JLS)
Length = 312
Score = 37.1 bits (82), Expect = 0.42
Identities = 15/52 (28%), Positives = 32/52 (61%)
Frame = +3
Query: 285 FNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVAQTISYEV 440
+ L+ ++G+++ + + +V +AGW NS ++L+GG R +A + YE+
Sbjct: 96 WTLLDIDVGVMWVNAVDVMMWAVVWLAGWGPNSVHSLIGGYRFLAHALGYEL 147
>UniRef50_A0UXN8 Cluster: Respiratory-chain NADH dehydrogenase,
subunit 1; n=1; Clostridium cellulolyticum H10|Rep:
Respiratory-chain NADH dehydrogenase, subunit 1 -
Clostridium cellulolyticum H10
Length = 312
Score = 36.7 bits (81), Expect = 0.56
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 4/122 (3%)
Frame = +3
Query: 63 FLTLLERKVLGYIQIRKGP--NKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPV 236
FL L+ G I+ K +K+G + QP+ D IKL K+ + S++ Y +P
Sbjct: 14 FLLLIAPLFTGIIRKIKSKIQHKIG-ASIFQPYYDLIKLLKKDLVVSSTSSWI-YTVAPY 71
Query: 237 FRFIXXXXXXXXIP--YIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLR 410
FI +P Y F F +L + L G + +AG + S + +G R
Sbjct: 72 VYFITSLAAAMCLPIIYQFKGFSFYTDLLVIVYLLVAGRIFMALAGLDTGSTFGGMGSSR 131
Query: 411 SV 416
+
Sbjct: 132 EL 133
>UniRef50_Q8TY38 Cluster: Membrane protein related to formate
hydrogenlyase subunit 4; n=1; Methanopyrus kandleri|Rep:
Membrane protein related to formate hydrogenlyase
subunit 4 - Methanopyrus kandleri
Length = 283
Score = 36.7 bits (81), Expect = 0.56
Identities = 38/112 (33%), Positives = 49/112 (43%)
Frame = +3
Query: 75 LERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFIXX 254
L RKV+ IQ R GP ++Q F +K KE P S F Y+ PVF I
Sbjct: 23 LHRKVMARIQRRPGPP------IVQEFLHTLKFMLKEGYAPLTSAEFLYWMVPVFNVI-I 75
Query: 255 XXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLR 410
I ++ NL + FF S V + AG SS S Y +GG+R
Sbjct: 76 WSAAVTISAVYR---GNL-LPFFALYASYKV-LSHGAGVSSGSTYTKIGGVR 122
>UniRef50_Q57940 Cluster: Putative NADH-ubiquinone oxidoreductase
MJ0520; n=8; Euryarchaeota|Rep: Putative NADH-ubiquinone
oxidoreductase MJ0520 - Methanococcus jannaschii
Length = 295
Score = 36.7 bits (81), Expect = 0.56
Identities = 30/114 (26%), Positives = 50/114 (43%)
Frame = +3
Query: 75 LERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFIXX 254
L RK++ IQ R GP ++Q +K + KE T+P + +P++ F+
Sbjct: 28 LHRKIMARIQGRPGPP------IIQYLLHTLKFYVKEITFPITAG------NPLYIFVAL 75
Query: 255 XXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSV 416
+ + I F +L + + L + G SS S Y +GG+RSV
Sbjct: 76 LDIAIWLAALIIAIDFKSSLLIIIGIYVLQKIVEHGCGLSSGSPYGKIGGVRSV 129
>UniRef50_A6DB52 Cluster: HYDROGENASE-4 COMPONENT C; n=3;
Epsilonproteobacteria|Rep: HYDROGENASE-4 COMPONENT C -
Caminibacter mediatlanticus TB-2
Length = 308
Score = 36.3 bits (80), Expect = 0.74
Identities = 46/211 (21%), Positives = 74/211 (35%), Gaps = 7/211 (3%)
Frame = +3
Query: 63 FLTLLERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFR 242
F + R + +Q RKGP Q + D KLF + R YP + ++ + ++P
Sbjct: 21 FFDGVARMIRAKMQARKGPPDP-----FQTYRDLYKLFKRGRVYPK-NAHWVFKYAPYIM 74
Query: 243 FIXXXXXXXXIPYIFNLICFNLGILFFL-CLTSLGVYIVIIAGWSSNSN---YALLGGLR 410
F +P + F G++ L + LG + I G +SN + +A +GG R
Sbjct: 75 FGVVATMLAALPITY-ATDFKAGVVSDLFVILYLGAFFRFIFGVASNDSGNAFAAIGGSR 133
Query: 411 SVAQTISYE---VRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXXXXXA 581
+ E V + + +
Sbjct: 134 EQMIGVFVEPVIVLCLIVVMLLAKTSNLVEIQYMVKHWQIGYIYPSFAIASIAFLWAIYV 193
Query: 582 ETNRTPFDFAEGERELVSGFNIEYRRGGFAL 674
E R P+D AE E+EL G EY A+
Sbjct: 194 EMARNPYDLAEAEQELQEGVLGEYSGSDLAI 224
>UniRef50_Q1AZS1 Cluster: Respiratory-chain NADH dehydrogenase,
subunit 1 precursor; n=2; Bacteria|Rep:
Respiratory-chain NADH dehydrogenase, subunit 1
precursor - Rubrobacter xylanophilus (strain DSM 9941 /
NBRC 16129)
Length = 303
Score = 35.9 bits (79), Expect = 0.98
Identities = 23/116 (19%), Positives = 49/116 (42%), Gaps = 2/116 (1%)
Frame = +3
Query: 99 IQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFIXXXXXXXXIP 278
+ + +G + G + P A L +E P + + +P+ + +P
Sbjct: 22 VAVLEGWSATGRLRPAGPAVSAAALLGRESVVPRRPDRVLFEAAPLLLLVSAVLAAAVLP 81
Query: 279 YIFNLICFNL--GILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVAQTISYEV 440
L+ +L G LF + + +++AGW ++ YA++ G R + Q + Y +
Sbjct: 82 LSPRLVVADLATGALFVNAALAYVMVALLMAGWGPDAAYAMVAGWRFLGQLLGYSM 137
>UniRef50_A5G4V9 Cluster: Respiratory-chain NADH dehydrogenase,
subunit 1 precursor; n=3; cellular organisms|Rep:
Respiratory-chain NADH dehydrogenase, subunit 1
precursor - Geobacter uraniumreducens Rf4
Length = 293
Score = 35.5 bits (78), Expect = 1.3
Identities = 37/121 (30%), Positives = 53/121 (43%)
Frame = +3
Query: 75 LERKVLGYIQIRKGPNKVGFIGLLQPFSDAIKLFTKERTYPNFSNYFCYYFSPVFRFIXX 254
++RKV +Q R GP ++QPF D KL KER N F P+ F+
Sbjct: 34 IDRKVSARLQGRYGPP------VMQPFYDVFKLLRKERIIVNKFQDF-----PIVLFLLF 82
Query: 255 XXXXXXIPYIFNLICFNLGILFFLCLTSLGVYIVIIAGWSSNSNYALLGGLRSVAQTISY 434
+F L I+F L L G + V + G+ S Y+ LG R + Q ++Y
Sbjct: 83 TMFSGA---LFFAGADLLLIIFSLALA--GTFFV-LGGYCVASPYSHLGAEREIIQMVAY 136
Query: 435 E 437
E
Sbjct: 137 E 137
>UniRef50_Q37142 Cluster: NADH-ubiquinone oxidoreductase chain 1;
n=2; cellular organisms|Rep: NADH-ubiquinone
oxidoreductase chain 1 - Artemia parthenogenetica (Brine
shrimp)
Length = 22
Score = 33.5 bits (73), Expect = 5.2
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +3
Query: 138 GLLQPFSDAIKLFTKERTYP 197
G+LQPFSD IKLF+KE + P
Sbjct: 1 GVLQPFSDGIKLFSKEVSLP 20
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 364,101,870
Number of Sequences: 1657284
Number of extensions: 4633133
Number of successful extensions: 12553
Number of sequences better than 10.0: 187
Number of HSP's better than 10.0 without gapping: 12117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12419
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56611575523
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -