Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0358
         (704 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g23270.1 68417.m03354 protein kinase family protein contains ...    29   2.3  
At3g45390.1 68416.m04900 lectin protein kinase family protein co...    29   4.0  
At5g13280.1 68418.m01525 aspartate kinase identical to aspartate...    28   6.9  
At4g23280.1 68417.m03355 protein kinase, putative similar to rec...    27   9.2  
At4g23130.2 68417.m03334 receptor-like protein kinase 6 (RLK6) i...    27   9.2  
At4g23130.1 68417.m03333 receptor-like protein kinase 6 (RLK6) i...    27   9.2  

>At4g23270.1 68417.m03354 protein kinase family protein contains
           Pfam PF00069: Protein kinase domain
          Length = 645

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -3

Query: 699 TIGNISQIVWRRWRDGSPSQV 637
           ++GN+    WR W +GSPS++
Sbjct: 536 SVGNLVTYTWRLWSNGSPSEL 556


>At3g45390.1 68416.m04900 lectin protein kinase family protein
           contains Protein kinases ATP-binding region signature,
           Prosite:PS00107 and Legume lectins beta-chain signature,
           Prosite:PS00307
          Length = 604

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = -2

Query: 484 RDSTTTSASPERCGED*ALPIVVTTPGLR-TVTPIFSAPCLPR*TPPS 344
           RD      SP+  G   + P+V+  PGL  T T + S+  +P  +PPS
Sbjct: 540 RDQALPDFSPDTPGIGVSTPMVMGIPGLAITSTSVTSSASVPLVSPPS 587


>At5g13280.1 68418.m01525 aspartate kinase identical to aspartate
           kinase [Arabidopsis thaliana] GI:4376158
          Length = 569

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 18/54 (33%), Positives = 29/54 (53%)
 Frame = -3

Query: 240 SFVGTFLEKLPPLRRNKICSRKLTLRSIMILIFFFTECLYFRKISGFCRNL*VK 79
           S + T+LE+L  L +     ++LTLR+   L+  F ECL  R  + +   + VK
Sbjct: 172 SVILTYLEELEQLLKGIAMMKELTLRTRDYLV-SFGECLSTRIFAAYLNTIGVK 224


>At4g23280.1 68417.m03355 protein kinase, putative similar to
           receptor-like protein kinase 4 (gi:13506745), 5
           (gi:13506747), and 6 (gi:13506749) from Arabidopsis
           thaliana; contains Pfam protein kinase domain PF00069
          Length = 656

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -3

Query: 699 TIGNISQIVWRRWRDGSPSQV 637
           +I N+    WR W +GSPS++
Sbjct: 544 SISNLVTYTWRLWSNGSPSEL 564


>At4g23130.2 68417.m03334 receptor-like protein kinase 6 (RLK6)
           identical to receptor-like protein kinase 6 [Arabidopsis
           thaliana] GI:13506749; contains Pfam domain PF00069:
           Protein kinase domain
          Length = 663

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 699 TIGNISQIVWRRWRDGSP 646
           + GN+    WR W DGSP
Sbjct: 554 SFGNLVTYTWRLWSDGSP 571


>At4g23130.1 68417.m03333 receptor-like protein kinase 6 (RLK6)
           identical to receptor-like protein kinase 6 [Arabidopsis
           thaliana] GI:13506749; contains Pfam domain PF00069:
           Protein kinase domain
          Length = 659

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 699 TIGNISQIVWRRWRDGSP 646
           + GN+    WR W DGSP
Sbjct: 550 SFGNLVTYTWRLWSDGSP 567


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,669,923
Number of Sequences: 28952
Number of extensions: 255118
Number of successful extensions: 779
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 779
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1516419560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)