Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0355
         (445 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase...    23   6.4  
AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase...    23   6.4  
AJ459961-1|CAD31060.1|  700|Anopheles gambiae prophenoloxidase 8...    22   8.5  
AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein p...    22   8.5  

>AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase
           isoform 2 protein.
          Length = 484

 Score = 22.6 bits (46), Expect = 6.4
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 107 THYYMPSCKSYFPT 66
           TH++ P   +YFPT
Sbjct: 79  THWHSPKFHAYFPT 92


>AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase
           isoform 1 protein.
          Length = 515

 Score = 22.6 bits (46), Expect = 6.4
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 107 THYYMPSCKSYFPT 66
           TH++ P   +YFPT
Sbjct: 110 THWHSPKFHAYFPT 123


>AJ459961-1|CAD31060.1|  700|Anopheles gambiae prophenoloxidase 8
           protein.
          Length = 700

 Score = 22.2 bits (45), Expect = 8.5
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = -3

Query: 95  MPSCKSYFPTHPASANIPPTRFCSCQW 15
           +P  +++     A+A    +RFC C W
Sbjct: 570 IPFERTFGNVEQANAGNAQSRFCGCGW 596


>AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein
           protein.
          Length = 353

 Score = 22.2 bits (45), Expect = 8.5
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -2

Query: 273 NFTPWLSSNSMSSHRPLASSDFNA 202
           NF  WL  NS S    ++SS  N+
Sbjct: 28  NFAAWLRGNSGSPLSSISSSSRNS 51


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 479,460
Number of Sequences: 2352
Number of extensions: 9110
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 37418568
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)