Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0355
(445 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC006282-1|AAH06282.1| 176|Homo sapiens vacuolar protein sortin... 95 1e-19
AB014763-1|BAB87804.1| 176|Homo sapiens DERP9 (dermal papilla d... 95 1e-19
AK128037-1|BAC87242.1| 1111|Homo sapiens protein ( Homo sapiens ... 31 1.4
D86864-1|BAA24070.1| 830|Homo sapiens acetyl LDL receptor protein. 30 4.1
D63483-1|BAA09770.1| 830|Homo sapiens KIAA0149 protein. 30 4.1
BC039735-1|AAH39735.1| 830|Homo sapiens scavenger receptor clas... 30 4.1
AB052950-1|BAC02696.1| 744|Homo sapiens SREC-5 protein. 30 4.1
AB052949-1|BAC02695.1| 337|Homo sapiens SREC-4 protein. 30 4.1
AB052948-1|BAC02694.1| 569|Homo sapiens SREC-3 protein. 30 4.1
AB052947-1|BAC02693.1| 342|Homo sapiens SREC-2 protein. 30 4.1
AB052946-1|BAC02692.1| 830|Homo sapiens SREC protein. 30 4.1
AK127479-1|BAC86998.1| 150|Homo sapiens protein ( Homo sapiens ... 29 5.5
>BC006282-1|AAH06282.1| 176|Homo sapiens vacuolar protein sorting
25 homolog (S. cerevisiae) protein.
Length = 176
Score = 95.1 bits (226), Expect = 1e-19
Identities = 39/87 (44%), Positives = 60/87 (68%)
Frame = +2
Query: 17 IDKSKNVWEVYWHSLDEWGNMIYNWACNNGFNNSVCTLFELREGDNTADQEFHNLDMNVL 196
+DKSK+ + + W +EWG +IY W +G NNSV TL+EL G++T D+EFH LD L
Sbjct: 90 LDKSKSSFLIMWRRPEEWGKLIYQWVSRSGQNNSVFTLYELTNGEDTEDEEFHGLDEATL 149
Query: 197 VKALKSLEAKGRCELMEFDDNQGVKFF 277
++AL++L+ + + E++ D +GVKFF
Sbjct: 150 LRALQALQQEHKAEIITVSDGRGVKFF 176
>AB014763-1|BAB87804.1| 176|Homo sapiens DERP9 (dermal papilla
derived protein 9) protein.
Length = 176
Score = 95.1 bits (226), Expect = 1e-19
Identities = 39/87 (44%), Positives = 60/87 (68%)
Frame = +2
Query: 17 IDKSKNVWEVYWHSLDEWGNMIYNWACNNGFNNSVCTLFELREGDNTADQEFHNLDMNVL 196
+DKSK+ + + W +EWG +IY W +G NNSV TL+EL G++T D+EFH LD L
Sbjct: 90 LDKSKSSFLIMWRRPEEWGKLIYQWVSRSGQNNSVFTLYELTNGEDTEDEEFHGLDEATL 149
Query: 197 VKALKSLEAKGRCELMEFDDNQGVKFF 277
++AL++L+ + + E++ D +GVKFF
Sbjct: 150 LRALQALQQEHKAEIITVSDGRGVKFF 176
>AK128037-1|BAC87242.1| 1111|Homo sapiens protein ( Homo sapiens
cDNA FLJ46156 fis, clone TESTI4001569. ).
Length = 1111
Score = 31.5 bits (68), Expect = 1.4
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 9/116 (7%)
Frame = +2
Query: 74 NMIYNWACNNGFNNSVCTLFELRE-GDNTADQE--FHNLDMNVLVKALKS-LEAKG--RC 235
+++Y+ C F+ + +++E D TA ++ ++N+ + L + LK LE +C
Sbjct: 216 HVLYHLPCLQRFDTLDVSAKQIKELADTTAMKKIMYYNMRIKTLQRHLKEDLEKLNDQKC 275
Query: 236 ELMEFDDNQGVKFF*M---NILRTRTELQHGSSKGHS*GTFYSHVSLM*LVRSCVT 394
+L + + + VK F + R EL+ GS KGHS G+ S V+ ++SC T
Sbjct: 276 KLQKLPEER-VKLFSFVKKTLERELAELK-GSGKGHSDGSNNSKVTDPETLKSCET 329
>D86864-1|BAA24070.1| 830|Homo sapiens acetyl LDL receptor protein.
Length = 830
Score = 29.9 bits (64), Expect = 4.1
Identities = 13/33 (39%), Positives = 15/33 (45%), Gaps = 3/33 (9%)
Frame = -3
Query: 101 YYMPSCKSYFPTHPASANIPPTRFCSCQ---WG 12
Y+ P C+ P HP P T C CQ WG
Sbjct: 94 YWGPDCRESCPCHPHGQCEPATGACQCQADRWG 126
>D63483-1|BAA09770.1| 830|Homo sapiens KIAA0149 protein.
Length = 830
Score = 29.9 bits (64), Expect = 4.1
Identities = 13/33 (39%), Positives = 15/33 (45%), Gaps = 3/33 (9%)
Frame = -3
Query: 101 YYMPSCKSYFPTHPASANIPPTRFCSCQ---WG 12
Y+ P C+ P HP P T C CQ WG
Sbjct: 94 YWGPDCRESCPCHPHGQCEPATGACQCQADRWG 126
>BC039735-1|AAH39735.1| 830|Homo sapiens scavenger receptor class
F, member 1 protein.
Length = 830
Score = 29.9 bits (64), Expect = 4.1
Identities = 13/33 (39%), Positives = 15/33 (45%), Gaps = 3/33 (9%)
Frame = -3
Query: 101 YYMPSCKSYFPTHPASANIPPTRFCSCQ---WG 12
Y+ P C+ P HP P T C CQ WG
Sbjct: 94 YWGPDCRESCPCHPHGQCEPATGACQCQADRWG 126
>AB052950-1|BAC02696.1| 744|Homo sapiens SREC-5 protein.
Length = 744
Score = 29.9 bits (64), Expect = 4.1
Identities = 13/33 (39%), Positives = 15/33 (45%), Gaps = 3/33 (9%)
Frame = -3
Query: 101 YYMPSCKSYFPTHPASANIPPTRFCSCQ---WG 12
Y+ P C+ P HP P T C CQ WG
Sbjct: 94 YWGPDCRESCPCHPHGQCEPATGACQCQADRWG 126
>AB052949-1|BAC02695.1| 337|Homo sapiens SREC-4 protein.
Length = 337
Score = 29.9 bits (64), Expect = 4.1
Identities = 13/33 (39%), Positives = 15/33 (45%), Gaps = 3/33 (9%)
Frame = -3
Query: 101 YYMPSCKSYFPTHPASANIPPTRFCSCQ---WG 12
Y+ P C+ P HP P T C CQ WG
Sbjct: 94 YWGPDCRESCPCHPHGQCEPATGACQCQADRWG 126
>AB052948-1|BAC02694.1| 569|Homo sapiens SREC-3 protein.
Length = 569
Score = 29.9 bits (64), Expect = 4.1
Identities = 13/33 (39%), Positives = 15/33 (45%), Gaps = 3/33 (9%)
Frame = -3
Query: 101 YYMPSCKSYFPTHPASANIPPTRFCSCQ---WG 12
Y+ P C+ P HP P T C CQ WG
Sbjct: 94 YWGPDCRESCPCHPHGQCEPATGACQCQADRWG 126
>AB052947-1|BAC02693.1| 342|Homo sapiens SREC-2 protein.
Length = 342
Score = 29.9 bits (64), Expect = 4.1
Identities = 13/33 (39%), Positives = 15/33 (45%), Gaps = 3/33 (9%)
Frame = -3
Query: 101 YYMPSCKSYFPTHPASANIPPTRFCSCQ---WG 12
Y+ P C+ P HP P T C CQ WG
Sbjct: 94 YWGPDCRESCPCHPHGQCEPATGACQCQADRWG 126
>AB052946-1|BAC02692.1| 830|Homo sapiens SREC protein.
Length = 830
Score = 29.9 bits (64), Expect = 4.1
Identities = 13/33 (39%), Positives = 15/33 (45%), Gaps = 3/33 (9%)
Frame = -3
Query: 101 YYMPSCKSYFPTHPASANIPPTRFCSCQ---WG 12
Y+ P C+ P HP P T C CQ WG
Sbjct: 94 YWGPDCRESCPCHPHGQCEPATGACQCQADRWG 126
>AK127479-1|BAC86998.1| 150|Homo sapiens protein ( Homo sapiens
cDNA FLJ45571 fis, clone BRTHA3010540. ).
Length = 150
Score = 29.5 bits (63), Expect = 5.5
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = -3
Query: 224 WLPVTLML*PGHSYQGYEILGQRYYLLLSAQTVYK 120
WLPV +L P H+ G+ ++G+ + L ++V K
Sbjct: 79 WLPVYPLLAPPHTSSGFHLVGEEHVPLTVLESVNK 113
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,515,014
Number of Sequences: 237096
Number of extensions: 1427435
Number of successful extensions: 2161
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2062
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2161
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3659526016
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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