Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0354
         (732 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    23   3.4  
AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax prot...    23   3.4  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    22   4.4  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   5.9  

>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +3

Query: 378 SEAEKQEQINKAAGEAQAMLA 440
           +E EKQ Q  KAA  A A+ A
Sbjct: 289 NEQEKQAQAQKAAAAAAAVAA 309


>AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax
           protein.
          Length = 96

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +3

Query: 378 SEAEKQEQINKAAGEAQAMLA 440
           +E EKQ Q  KAA  A A+ A
Sbjct: 71  NEQEKQAQAQKAAAAAAAVAA 91


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -1

Query: 63  IQDLLHHMKLNKDQSRAEFLQ 1
           I +LL HM L  D S A+F Q
Sbjct: 359 IHELLGHMPLLADPSFAQFSQ 379


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = -1

Query: 459 VSEPRPPRASLALHPQLYLSAPAS 388
           V+ P PP  S  ++PQ  +++P++
Sbjct: 405 VNVPVPPMQSQIINPQPQITSPSN 428


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,314
Number of Sequences: 336
Number of extensions: 3006
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)