Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0354
(732 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_38836| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 3e-14
SB_10636| Best HMM Match : Band_7 (HMM E-Value=1.1e-05) 73 3e-13
SB_19700| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005
SB_18255| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.32
SB_23465| Best HMM Match : Pkinase_Tyr (HMM E-Value=3.1e-07) 32 0.55
SB_21051| Best HMM Match : Abhydro_lipase (HMM E-Value=1.8e-33) 31 0.96
SB_20884| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.96
SB_58977| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_7993| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_43495| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_47164| Best HMM Match : ARD (HMM E-Value=9.4) 29 2.9
SB_38795| Best HMM Match : M (HMM E-Value=2.4e-07) 29 2.9
SB_30516| Best HMM Match : GETHR (HMM E-Value=0.9) 29 2.9
SB_9049| Best HMM Match : SMC_C (HMM E-Value=0.0098) 29 3.9
SB_50960| Best HMM Match : Pkinase (HMM E-Value=0) 29 3.9
SB_16665| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.10001e-40) 29 5.1
SB_30749| Best HMM Match : FARP (HMM E-Value=0.032) 29 5.1
SB_10632| Best HMM Match : DEP (HMM E-Value=0.78) 29 5.1
SB_5869| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_28257| Best HMM Match : Gp-FAR-1 (HMM E-Value=3.2) 28 6.8
SB_13832| Best HMM Match : LRR_1 (HMM E-Value=5.4e-10) 28 6.8
SB_26243| Best HMM Match : ACN9 (HMM E-Value=0.87) 28 6.8
SB_49884| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
>SB_38836| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 70
Score = 76.2 bits (179), Expect = 3e-14
Identities = 36/69 (52%), Positives = 53/69 (76%)
Frame = +3
Query: 420 EAQAMLAVAEARSRGLKLIAHALADRDSRHAASLTLAEQYVSAFNKLARTNNTLILPANA 599
EA+A++A A+AR+ G+ +A AL+ + AA L +AE YV AF+KLA+TNNT+ILPA+
Sbjct: 2 EAEAIIAKAQARATGILSVAEALSKQSGDKAAGLNVAELYVEAFSKLAKTNNTVILPASV 61
Query: 600 GDVSNLVAQ 626
GD +++VAQ
Sbjct: 62 GDPASMVAQ 70
>SB_10636| Best HMM Match : Band_7 (HMM E-Value=1.1e-05)
Length = 152
Score = 72.5 bits (170), Expect = 3e-13
Identities = 34/119 (28%), Positives = 73/119 (61%)
Frame = +3
Query: 48 VEDPEFAITQLAQTTMRSEIGQISLDKVFRERESLNVSIVHAINKASEAWGITCLRYEIR 227
VE+ + LAQTT+R+ +G +L ++ +R+ ++ ++ ++++A++ WG+ R E++
Sbjct: 6 VENANASTRLLAQTTLRNTLGTKNLTEILSQRDEISQTMQSSLDEATDPWGVKVERIEVK 65
Query: 228 DVKLPTRVHEAMQMQVEAERRKRAAILESEGVRAADINVAEGKRQSRILASEAEKQEQI 404
DV+LP ++ AM + EA R RA I+ +EG ++N + +++ + SE+ + Q+
Sbjct: 66 DVRLPQQLQRAMAAEAEATREARAKIIAAEG----EMNASRSLKEASDIISESPQALQL 120
>SB_19700| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 664
Score = 38.7 bits (86), Expect = 0.005
Identities = 30/138 (21%), Positives = 65/138 (47%), Gaps = 7/138 (5%)
Frame = +3
Query: 60 EFAITQLAQTTMRSEIGQISLDKVFRERESLNVSIVHAINKASEAWGITCLRYEIRDVKL 239
E + Q + +R+ +G +S+++++++RE+ + + GI L + I+D++
Sbjct: 383 ESVVLQTLEGHLRAILGTLSVEEIYKDREAFAALVREVASPDVGRMGIEILSFTIKDIED 442
Query: 240 PTRVHEAMQMQVEAERRKRAAILESEGVRAADINVAEGKRQSRILASEAE-------KQE 398
++ A+ ++ A I +E R A I AE ++Q + E + ++
Sbjct: 443 HVDYLNSLGKTQTAKVKRDADIGVAEAKRDAGIREAECEKQKMDVVYETQTNIADSSREY 502
Query: 399 QINKAAGEAQAMLAVAEA 452
Q+ KAA + + AEA
Sbjct: 503 QMQKAAYDQEVNTRKAEA 520
Score = 31.5 bits (68), Expect = 0.73
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Frame = +3
Query: 210 LRYEIRDVKLPTRVH-EAMQMQVEAERRKRAAILESEGVRAADINVAEGKRQSRILASEA 386
L YE++ K ++ E +Q++V ERRK+ + E E R +AE KR +EA
Sbjct: 522 LSYELQGNKEKQKIRSEEIQIEV-VERRKQIEVQEKEIQRKEKELIAEVKR-----PAEA 575
Query: 387 EKQEQINKAAGEAQAMLAVAEARSRGLKLIAHALA 491
E + A G+ + +A+A + +K+ A A
Sbjct: 576 ESYKVETLAQGKRTQTVFLAQADAERIKVAAEVAA 610
>SB_18255| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1457
Score = 32.7 bits (71), Expect = 0.32
Identities = 31/110 (28%), Positives = 54/110 (49%), Gaps = 2/110 (1%)
Frame = +3
Query: 243 TRVHE-AMQMQVEAERRKRAAILESE-GVRAADINVAEGKRQSRILASEAEKQEQINKAA 416
+RVH+ A++ + + E + +AI ++E + + + E + +S+ L EK ++K A
Sbjct: 84 SRVHQQALRWKNDLETERYSAIQQAEKALEDRNFAIRESELKSKQLM---EKYSLLSKTA 140
Query: 417 GEAQAMLAVAEARSRGLKLIAHALADRDSRHAASLTLAEQYVSAFNKLAR 566
E A E + + L L +L+DRD+ A Q V AFN R
Sbjct: 141 SE-DANAKCRELKEK-LSLAEKSLSDRDAELAQLRNEINQSVMAFNNAQR 188
>SB_23465| Best HMM Match : Pkinase_Tyr (HMM E-Value=3.1e-07)
Length = 1118
Score = 31.9 bits (69), Expect = 0.55
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Frame = +3
Query: 243 TRVHEAMQMQVEAERRKRAAILESEGVRAADINVAEGKRQSRILASEAEKQ------EQI 404
TR +A+Q ++ ER +R S + + ++SRIL+ E + + +++
Sbjct: 846 TRAKDAIQAELIQERERRNNDQASRDEERQNYDQQMHDQESRILSMEVDLRAKDDSLDEL 905
Query: 405 NKAAGEAQAMLAVAEARSR 461
+ GEAQAMLA + R
Sbjct: 906 RRRVGEAQAMLAQTQDERR 924
>SB_21051| Best HMM Match : Abhydro_lipase (HMM E-Value=1.8e-33)
Length = 991
Score = 31.1 bits (67), Expect = 0.96
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = -3
Query: 286 LSASTCICIASCTRVGSLTSRISYLKQVIPQASLALLMACTIDTFKD-SLSLNTLSKEIC 110
++A C + SC + ++T I L+ V +L + CTID + + ++N L C
Sbjct: 498 VAAVRCCFLRSCDLLRTVTCTIDLLRTVTCTINLLRTVTCTIDLLRTVTCTINLLRTVTC 557
Query: 109 PIS-DRIVVC 83
I+ R V C
Sbjct: 558 TINLLRTVTC 567
>SB_20884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 387
Score = 31.1 bits (67), Expect = 0.96
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 2/108 (1%)
Frame = +3
Query: 255 EAMQMQVEAERRKRAAILESEGVRAADINVAEGKRQSRILASEAEKQEQINKAAGEAQAM 434
E MQ E +R ILESE +IN + R+L S EK+EQI + + E++
Sbjct: 133 ELMQAMRETKRDLAHLILESE----REINNKSLESLDRMLESRGEKREQIVEVSSESELK 188
Query: 435 LAVAEAR-SRGLKLIAHALADRDSRHAASLTLA-EQYVSAFNKLARTN 572
+R + ++ + L R A + +A EQ +N LA N
Sbjct: 189 TPKGSSRMKQKIRGVTSDLNRSRIRIAFARKIAYEQGQKDWNALAENN 236
>SB_58977| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 30.3 bits (65), Expect = 1.7
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +3
Query: 255 EAMQMQVEAERRKRAAILES-EGVRAADINVAEGKRQSRILASEAEKQEQI 404
E Q + EAERRK+ AILE E ++ A N+ K +R+ EKQ+Q+
Sbjct: 64 EKKQKEEEAERRKKQAILEKLEVIKMATNNLFIIKSIARL---RVEKQDQL 111
>SB_7993| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 676
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +3
Query: 264 QMQVEAERRKRAAILESEGVRAADINVAEGKRQSRILASEAEKQEQ 401
Q++ EA RR + E+EG A+D + G RQ LAS + +++
Sbjct: 23 QLKAEALRRLKLDDAENEGDNASDAGDSVGSRQESNLASGSSNRDE 68
>SB_43495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1994
Score = 29.9 bits (64), Expect = 2.2
Identities = 34/151 (22%), Positives = 71/151 (47%), Gaps = 3/151 (1%)
Frame = +3
Query: 231 VKLPTRVHEAMQMQVEAERRKRAAILESEGVRAADINVAEGKRQSRILASEA-EKQEQIN 407
+ L T + + + AE + ++ L +E + + VAE + S L +E+ + +
Sbjct: 323 ISLSTSITDQTSSSLVAESGQTSSSLVAESGQTSSSLVAESGQTSSSLVAESGQTSSSLV 382
Query: 408 KAAGEAQAMLAVAEARSRGLKLIAHALADRDSRHAASLTLAEQYVSAFNKLARTNNT-LI 584
+G+ + L VAE+ L+A +S +S +AE ++ + +A + T
Sbjct: 383 AESGQTSSSL-VAESGQTSSSLVA------ESGQTSSSLVAESGQTSSSLVAESGQTSSS 435
Query: 585 LPANAGDV-SNLVAQAMSIYSTVTAHNAQST 674
L A +G S+LV ++ S++ A + Q++
Sbjct: 436 LVAESGQTSSSLVVESGQTSSSLVAESGQTS 466
>SB_47164| Best HMM Match : ARD (HMM E-Value=9.4)
Length = 132
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 348 EGKRQSRILASEAEKQEQINKAAGEAQAML 437
+G+++SR+L SEA +QE N E + L
Sbjct: 103 QGQQESRLLTSEASRQENFNAMFNEDEVFL 132
>SB_38795| Best HMM Match : M (HMM E-Value=2.4e-07)
Length = 1447
Score = 29.5 bits (63), Expect = 2.9
Identities = 33/147 (22%), Positives = 69/147 (46%), Gaps = 1/147 (0%)
Frame = +3
Query: 258 AMQMQ-VEAERRKRAAILESEGVRAADINVAEGKRQSRILASEAEKQEQINKAAGEAQAM 434
++Q+Q ++AE+R +++ S+ + AD++V K R E + Q + +K+ E
Sbjct: 798 SLQVQTLDAEKRSLQSLVSSQEKQVADLSVKLEKSSERCRLMEQQLQMEQSKST-ELTTK 856
Query: 435 LAVAEARSRGLKLIAHALADRDSRHAASLTLAEQYVSAFNKLARTNNTLILPANAGDVSN 614
+ S K A AL +D A + L Q+ ++ + +R+ ++ G++
Sbjct: 857 FQYSSQSSSSAKQEADAL--KDEVKALTQQLLRQHDASLD--SRSKYEKLIMNIRGEIER 912
Query: 615 LVAQAMSIYSTVTAHNAQSTQPETQDL 695
+ S T+ + Q+T+ E +DL
Sbjct: 913 EREKMSSERHTLASQLEQATR-ENKDL 938
>SB_30516| Best HMM Match : GETHR (HMM E-Value=0.9)
Length = 1058
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/75 (25%), Positives = 35/75 (46%)
Frame = +3
Query: 243 TRVHEAMQMQVEAERRKRAAILESEGVRAADINVAEGKRQSRILASEAEKQEQINKAAGE 422
T+ + + + + E ++R + ++E + I K+QS IL EKQ N G+
Sbjct: 683 TKREKQIGILTQNEEKQRGILTQNEK-KQRGILTQNVKKQSGILTQNEEKQRYPNTKRGK 741
Query: 423 AQAMLAVAEARSRGL 467
A+ E + RG+
Sbjct: 742 AKRYPTQNEEKQRGI 756
>SB_9049| Best HMM Match : SMC_C (HMM E-Value=0.0098)
Length = 661
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/53 (28%), Positives = 30/53 (56%)
Frame = +3
Query: 330 ADINVAEGKRQSRILASEAEKQEQINKAAGEAQAMLAVAEARSRGLKLIAHAL 488
A +N+ + K +++ S+ E ++ +AQA L ++++R LK +AH L
Sbjct: 427 AKVNMEKNKLENQCRESQ-ENYARLEDEYRQAQASLEAQKSKARNLKQVAHQL 478
>SB_50960| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 632
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +3
Query: 195 WGITCLRYEIRDVKLPTRVHEAMQMQVEAERR 290
WG+ CL YE+ K P R + + E ERR
Sbjct: 268 WGLGCLIYEMIQGKSPFRARKEKVKREEVERR 299
>SB_16665| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.10001e-40)
Length = 935
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +3
Query: 315 EGVRAADINVAEGKRQSRILASEAEKQEQINKAAGEAQAMLAVAEARS-RGLKLI 476
EG+ + + EGK Q + + + Q + G++Q + + E +S RG++LI
Sbjct: 850 EGLSQCGVLLIEGKSQRGVQLIQGKSQRGVQLIEGKSQRCVQLIEGKSQRGVQLI 904
>SB_30749| Best HMM Match : FARP (HMM E-Value=0.032)
Length = 2565
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -1
Query: 459 VSEPRPPRASLALHPQLYLSAPASLPQKRVS*TGVFLLQH 340
VS RP R + + ++L + PQK V G+F L+H
Sbjct: 1953 VSRRRPRRLVIRRNVSIFLKSGKRRPQKLVRQNGIFYLRH 1992
>SB_10632| Best HMM Match : DEP (HMM E-Value=0.78)
Length = 500
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -1
Query: 489 RVRVQSV*AHVSEPRPPRASLALHPQL 409
R R S +H S PRPP S AL P+L
Sbjct: 432 RGRAPSNSSHPSSPRPPSRSTALSPEL 458
>SB_5869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1017
Score = 28.7 bits (61), Expect = 5.1
Identities = 33/137 (24%), Positives = 59/137 (43%), Gaps = 1/137 (0%)
Frame = +3
Query: 318 GVRAADINVAEGKRQSRILASEAEKQEQINKAAGEAQAMLAVAEARSRGLKLIAHALADR 497
GVR I V E R+ + + +E+I +AAG Q V S G++ HA++
Sbjct: 581 GVRP--IGVGEVLRRIMGKTASSTFKEEIKEAAGPLQ----VCAGHSAGVEAAIHAMSQV 634
Query: 498 DSRHAASLTLAEQYVSAFNKLARTNNTLILPANAGDVSNLVAQAMSIYSTVTAHNAQSTQ 677
+ + L +AFN++ R + +P D+ + S +TA + S
Sbjct: 635 FYEEESDVVLLIDATNAFNQMNRAGG-IGIP----DLKREAPEQFKASSDITAIHVDSIV 689
Query: 678 PETQDL-YEEPLVKIKR 725
++ + E L ++KR
Sbjct: 690 AQSSSMPANEQLEELKR 706
>SB_28257| Best HMM Match : Gp-FAR-1 (HMM E-Value=3.2)
Length = 497
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +3
Query: 219 EIRDVKLPTRVHEAMQMQVEAERRKRAAILESEGVRAADINVAEGKR 359
++ DV+LP +HEA+ E + IL++E A ++ G +
Sbjct: 348 DVADVELPRLLHEALGGSTEEAEHLKERILKTELASKAGFSMKHGSK 394
>SB_13832| Best HMM Match : LRR_1 (HMM E-Value=5.4e-10)
Length = 637
Score = 28.3 bits (60), Expect = 6.8
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = +1
Query: 67 QLHSWRKLQCDQKLGRFLWIKCSGR 141
++H W K+ CD K ++ C G+
Sbjct: 549 KVHDWEKIDCDTKFWENMYFLCEGQ 573
>SB_26243| Best HMM Match : ACN9 (HMM E-Value=0.87)
Length = 344
Score = 28.3 bits (60), Expect = 6.8
Identities = 21/96 (21%), Positives = 42/96 (43%), Gaps = 3/96 (3%)
Frame = +3
Query: 270 QVEAERRKRAAI---LESEGVRAADINVAEGKRQSRILASEAEKQEQINKAAGEAQAMLA 440
QVEA+ K + LE + +RA D+ K + R+ S EKQ +++ M
Sbjct: 125 QVEAQGEKMRDLEFTLEEQKIRAEDLEQQLEKEKLRVSQSAKEKQNLLSEIETLRIPMNN 184
Query: 441 VAEARSRGLKLIAHALADRDSRHAASLTLAEQYVSA 548
+ G L +HA ++ + + + + ++ +
Sbjct: 185 SSRNTENGDNLTSHAYKEKLAEKESEIEALKDHIES 220
>SB_49884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 117
Score = 27.9 bits (59), Expect = 9.0
Identities = 14/55 (25%), Positives = 22/55 (40%)
Frame = +3
Query: 534 QYVSAFNKLARTNNTLILPANAGDVSNLVAQAMSIYSTVTAHNAQSTQPETQDLY 698
+++ F R N + +L + D++N A S HN S QD Y
Sbjct: 6 RHIKKFRASRRANESTLLTSENNDIANQNADTAFFTSKKKRHNNNSYTASDQDAY 60
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,808,274
Number of Sequences: 59808
Number of extensions: 393901
Number of successful extensions: 996
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 905
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 995
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1962001171
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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