Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0354
         (732 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   7.4  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    23   7.4  
AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax home...    23   7.4  
AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax home...    23   7.4  
EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.       23   9.7  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    23   9.7  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 19/50 (38%), Positives = 26/50 (52%)
 Frame = +3

Query: 261 MQMQVEAERRKRAAILESEGVRAADINVAEGKRQSRILASEAEKQEQINK 410
           M MQ   ER K    LE E  RAA +   E  R++R  A E EK+ ++ +
Sbjct: 432 MGMQSIHERMK----LEEEH-RAARLREEERAREAREAAIEREKERELRE 476


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 33/127 (25%), Positives = 54/127 (42%)
 Frame = +3

Query: 342 VAEGKRQSRILASEAEKQEQINKAAGEAQAMLAVAEARSRGLKLIAHALADRDSRHAASL 521
           V+ G  Q+  L++   +Q+Q +K AG A      + + +   K +   L   +       
Sbjct: 9   VSGGVEQAMELSTLQHQQQQPSKQAGGAGVRAERSISGTESTKPVPTVLGGPN------- 61

Query: 522 TLAEQYVSAFNKLARTNNTLILPANAGDVSNLVAQAMSIYSTVTAHNAQSTQPETQDLYE 701
             A   VS+  +L R   T +L A+     +L     S  S VTA  A+ +QP T     
Sbjct: 62  LFAPSAVSS--QLQRPQPT-VLAASPAPQPSLAPVVPS--SVVTAPPARPSQPPTTRFAP 116

Query: 702 EPLVKIK 722
           EP  ++K
Sbjct: 117 EPRAEVK 123


>AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax
           homeotic protein IVa protein.
          Length = 310

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +3

Query: 378 SEAEKQEQINKAAGEAQAMLAVAE 449
           +E EKQ Q  KAA  A A  A+ E
Sbjct: 285 NEQEKQAQAQKAAAAAAAAAALHE 308


>AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax
           homeotic protein IIa protein.
          Length = 327

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +3

Query: 378 SEAEKQEQINKAAGEAQAMLAVAE 449
           +E EKQ Q  KAA  A A  A+ E
Sbjct: 302 NEQEKQAQAQKAAAAAAAAAALHE 325


>EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.
          Length = 661

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 92  CSLRQLCNCKFRI 54
           CS RQLC C  R+
Sbjct: 504 CSDRQLCTCTHRV 516


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 171 AINKASEAWGITCLRYE 221
           A+ K  + WG TCL +E
Sbjct: 84  ALPKLFKEWGTTCLTFE 100


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 701,445
Number of Sequences: 2352
Number of extensions: 13216
Number of successful extensions: 32
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74844540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)