Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0353
         (685 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal ...    24   5.1  
Z49833-1|CAA89994.1|  250|Anopheles gambiae serine proteinase pr...    23   6.8  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   6.8  
AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    23   9.0  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    23   9.0  
AB107248-1|BAE72063.1|  278|Anopheles gambiae Bcl-2 family prote...    23   9.0  

>CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal RNA
           adenine dimethylaseprotein.
          Length = 375

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +2

Query: 191 WKFVQIILCAVVLLSRNFVQLLL 259
           W+  Q  LC  +LL RN   L L
Sbjct: 16  WRSAQTSLCRTILLQRNVRNLRL 38


>Z49833-1|CAA89994.1|  250|Anopheles gambiae serine proteinase
           protein.
          Length = 250

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 421 PKEDSFEKACKSDKLRLFINITI 489
           PKEDSFE+         F+N+ +
Sbjct: 72  PKEDSFERKVSYIMTNWFLNVLV 94


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 109 WRAPQNYYQHAHCRVR 62
           W +P NY  +A C+ R
Sbjct: 636 WNSPANYRSYAQCKGR 651


>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = +2

Query: 158 EALKICFYHFSWKFVQIILCAVVLLSRN 241
           E  +IC+YHF+ ++  ++  A  + + N
Sbjct: 159 EPPRICYYHFTVEYYTVLGAACQVCTPN 186


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = +2

Query: 158 EALKICFYHFSWKFVQIILCAVVLLSRN 241
           E  +IC+YHF+ ++  ++  A  + + N
Sbjct: 159 EPPRICYYHFTVEYYTVLGAACQVCTPN 186


>AB107248-1|BAE72063.1|  278|Anopheles gambiae Bcl-2 family protein
           Anob-1 protein.
          Length = 278

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -2

Query: 123 TNKRTGVHHRTT 88
           TNKR+ +HH TT
Sbjct: 49  TNKRSPIHHLTT 60


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 704,850
Number of Sequences: 2352
Number of extensions: 13915
Number of successful extensions: 21
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)