Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0351
         (733 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    25   0.83 
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   1.9  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    23   2.5  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    22   4.4  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    22   5.9  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   7.8  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 24.6 bits (51), Expect = 0.83
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = -3

Query: 269 DFFCLF*VYFIQKHRYFIYRLRHYEVCRVS*LFYK*VN 156
           DF C   V + Q + +F Y+L  Y +  +  + YK +N
Sbjct: 145 DFLCRHTVEYFQNYIHFFYQLLLYLITDMILMRYKELN 182


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = -2

Query: 180 LVIL*ISKHSLYLFFIVEKERKNVFNYTFT 91
           L +L    H + LF I    RKN  NY FT
Sbjct: 23  LKVLVTFAHFICLFPITINIRKNGLNYNFT 52


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -2

Query: 123 ERKNVFNYTFTIRRHVTYVQYNTTVNRASRNLDL 22
           E+KN    TFT++   T + + T     S NLDL
Sbjct: 129 EQKNTVTVTFTVQSDDTTLNWGT---NESYNLDL 159


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/42 (23%), Positives = 24/42 (57%)
 Frame = -2

Query: 687 KRGVSEEMVYDREVWKGKRMMMSLYAYIIEVIPKIY*IGIIY 562
           K+    E + + ++ KG+++  +LY  ++ VI  +Y + + Y
Sbjct: 76  KKKYWSEFLANLKLLKGRKIRKNLYYLLLFVINVLYVLTLCY 117


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -1

Query: 298 FSFDVSPVGSISFVCFKFILYKSIGILFID 209
           F+F V    S++FV     L+ SI I+F D
Sbjct: 154 FAFQVLMCTSMNFVLLIGDLHTSIYIIFFD 183


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = -2

Query: 147  YLFFIVEKERKNVFNYTFTIRRHVTYVQYNTTV 49
            YLF  VE  R+    +   I    TY QY+  V
Sbjct: 1044 YLFETVEFGREEGKEHHLKISNLKTYTQYSVVV 1076


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,704
Number of Sequences: 336
Number of extensions: 4161
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)