Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0351
         (733 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            27   0.45 
DQ974168-1|ABJ52808.1|  447|Anopheles gambiae serpin 9 protein.        24   4.2  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    24   4.2  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    24   5.6  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    23   7.4  
AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.           23   9.7  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 27.5 bits (58), Expect = 0.45
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = -2

Query: 141  FFIVEKERK-NVFNYTFTIRRHVTYVQYNTTVN 46
            FF++  E K +VF+   T+  H    QYN TVN
Sbjct: 938  FFMLSLENKPHVFDCYTTVIPHTVLTQYNYTVN 970


>DQ974168-1|ABJ52808.1|  447|Anopheles gambiae serpin 9 protein.
          Length = 447

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +1

Query: 652 SVIYHFFAHSPLTHIVFHAIHPFLF 726
           +V + F +  P    +FH  HPF+F
Sbjct: 403 TVAFSFRSSRPADPAMFHCNHPFVF 427


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = -2

Query: 303 CLFPLMCPPSDRFLLFVLSLFYTKA*VFYLSIEALRSLPGQL 178
           C   L C   D+ L+FV S F+  A    +     RSL G L
Sbjct: 532 CYLRLGCMARDKGLIFVASDFFKDALKINMENPDTRSLLGNL 573


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -2

Query: 75  TYVQYNTTVNRASRNLDLPSCR 10
           T +     V R+  NL+LPSCR
Sbjct: 84  TEISLPELVTRSLSNLELPSCR 105


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +1

Query: 316 LNSEHFHIYLPFEPSLSTNNSRPKLAKSVQPFSR 417
           +NS+H  I +  E     N SRP    S++ FS+
Sbjct: 196 MNSDHRAIRIDLETQSVRNLSRPITGWSIKYFSK 229


>AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.
          Length = 259

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 6/23 (26%), Positives = 15/23 (65%)
 Frame = -1

Query: 415 SRTVEPIWLILVLNYLWKEKVQK 347
           ++T E +W +++  Y W E++ +
Sbjct: 11  NKTTEALWKLILAPYGWNEQMNE 33


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 746,006
Number of Sequences: 2352
Number of extensions: 15314
Number of successful extensions: 23
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74844540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)