Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0350
         (504 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.17 
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    22   2.7  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    21   4.7  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   6.3  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   6.3  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   6.3  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   6.3  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   6.3  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 26.2 bits (55), Expect = 0.17
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = -2

Query: 101 ICIFYNNWKTLDFVASIFHLNLIYYAI*KIFFL 3
           +C++Y  +  + F   +  L  IYY +  +FFL
Sbjct: 111 LCVYYFYYAFIIFTVHLLFLLCIYYFVVPLFFL 143


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 14/54 (25%), Positives = 23/54 (42%)
 Frame = +1

Query: 151 VILIMYSNYFVTESIVFNCFDN*LFNIASLYCCLFFKP*YYNFLYNYFVS*KIC 312
           +++ +YS Y  T+ + F  F   L     LY         + F Y YF+   +C
Sbjct: 123 LLVALYSGYVWTDILGFGYFREYLAEAVQLY---------FQFYYTYFLCVIVC 167


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +1

Query: 241 YCCLFFKP*YYNFLYN 288
           YC  ++ P YY +L N
Sbjct: 33  YCDPWYNPYYYQYLQN 48


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu
          protein.
          Length = 322

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 92 FYNNWKTLDFVAS 54
          FY N+KT  F+AS
Sbjct: 15 FYQNYKTNPFLAS 27


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -3

Query: 256 KINSNITMLY 227
           KIN NI+MLY
Sbjct: 873 KINENISMLY 882


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -3

Query: 256 KINSNITMLY 227
           KIN NI+MLY
Sbjct: 873 KINENISMLY 882


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
          transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 92 FYNNWKTLDFVAS 54
          FY N+KT  F+AS
Sbjct: 15 FYQNYKTNPFLAS 27


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 92 FYNNWKTLDFVAS 54
          FY N+KT  F+AS
Sbjct: 15 FYQNYKTNPFLAS 27


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,936
Number of Sequences: 336
Number of extensions: 1214
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11944578
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)