Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0349
         (586 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   3.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   4.4  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   5.8  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   5.8  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   5.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   5.8  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    21   5.8  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   5.8  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = +2

Query: 230 VLIYFKSILIIVCHLLFKCFQKVALHIW 313
           +  ++ + +I   HLLF C   + L I+
Sbjct: 212 IYYFYSAFIIFTIHLLFYCVLIILLCIY 239


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 7/32 (21%), Positives = 18/32 (56%)
 Frame = +2

Query: 224 ITVLIYFKSILIIVCHLLFKCFQKVALHIWTL 319
           +T L+Y    + ++C LL +    + +++ +L
Sbjct: 410 VTALVYCSLAIFVLCELLIEGTTSILINVPSL 441


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 2    KELSKEKKDKEAVKSQAE 55
            KEL +EKK  E  K +A+
Sbjct: 1071 KELEEEKKQAEEAKRKAK 1088


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 2    KELSKEKKDKEAVKSQAE 55
            KEL +EKK  E  K +A+
Sbjct: 1071 KELEEEKKQAEEAKRKAK 1088


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 2    KELSKEKKDKEAVKSQAE 55
            KEL +EKK  E  K +A+
Sbjct: 1071 KELEEEKKQAEEAKRKAK 1088


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 2    KELSKEKKDKEAVKSQAE 55
            KEL +EKK  E  K +A+
Sbjct: 1071 KELEEEKKQAEEAKRKAK 1088


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +3

Query: 309 SGLWNQLNHKHY 344
           + LW QL ++HY
Sbjct: 138 TALWKQLRYEHY 149


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 7/28 (25%), Positives = 18/28 (64%)
 Frame = +2

Query: 206 VYAASSITVLIYFKSILIIVCHLLFKCF 289
           ++ A+++  + YF S+ +++  L+  CF
Sbjct: 310 LHKATTLETVYYFISLGLLILRLVSVCF 337


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,765
Number of Sequences: 336
Number of extensions: 1876
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14621740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)