Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0349
(586 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X81817-1|CAA57415.1| 246|Homo sapiens BAP31 protein. 47 6e-05
Z31696-1|CAA83501.1| 246|Homo sapiens CDM protein. 46 1e-04
X81109-1|CAA57015.1| 246|Homo sapiens tumor-associated antigen ... 46 1e-04
U36341-2|AAA79508.1| 127|Homo sapiens CDM protein protein. 46 1e-04
BC065292-1|AAH65292.1| 246|Homo sapiens B-cell receptor-associa... 46 1e-04
BC014323-1|AAH14323.1| 246|Homo sapiens B-cell receptor-associa... 46 1e-04
AK223059-1|BAD96779.1| 246|Homo sapiens B-cell receptor-associa... 46 1e-04
AK222494-1|BAD96214.1| 246|Homo sapiens B-cell receptor-associa... 46 1e-04
BT006981-1|AAP35627.1| 241|Homo sapiens B-cell receptor-associa... 42 0.002
BC008478-1|AAH08478.1| 241|Homo sapiens B-cell receptor-associa... 42 0.002
AF126020-1|AAF17230.1| 242|Homo sapiens B-cell receptor-associa... 42 0.002
AC004839-1|AAC83971.1| 241|Homo sapiens unknown protein. 42 0.002
DQ109808-1|AAZ83370.1| 2479|Homo sapiens nephrocystin-6 protein. 30 5.2
BC043398-1|AAH43398.1| 805|Homo sapiens CEP290 protein protein. 30 5.2
AK023677-1|BAB14636.1| 574|Homo sapiens protein ( Homo sapiens ... 30 5.2
AF317887-1|AAK01919.1| 589|Homo sapiens monoclonal antibody 3H1... 30 5.2
AL390294-1|CAH73142.1| 929|Homo sapiens TAF3 RNA polymerase II,... 30 6.9
AL353754-1|CAH73451.1| 929|Homo sapiens TAF3 RNA polymerase II,... 30 6.9
AL159172-1|CAI15661.1| 929|Homo sapiens TAF3 RNA polymerase II,... 30 6.9
>X81817-1|CAA57415.1| 246|Homo sapiens BAP31 protein.
Length = 246
Score = 46.8 bits (106), Expect = 6e-05
Identities = 23/49 (46%), Positives = 33/49 (67%)
Frame = +2
Query: 2 KELSKEKKDKEAVKSQAEGLNKEYDRLAEEHSKLQKKLTVSGEGDSKKD 148
++L K + + A++ Q+EGL KEYDRL EEH+KLQ V G D K++
Sbjct: 200 QKLEKAENEVLAMRKQSEGLTKEYDRLLEEHAKLQ--AAVDGPMDKKEE 246
>Z31696-1|CAA83501.1| 246|Homo sapiens CDM protein.
Length = 246
Score = 46.0 bits (104), Expect = 1e-04
Identities = 23/49 (46%), Positives = 32/49 (65%)
Frame = +2
Query: 2 KELSKEKKDKEAVKSQAEGLNKEYDRLAEEHSKLQKKLTVSGEGDSKKD 148
++L K + A++ Q+EGL KEYDRL EEH+KLQ V G D K++
Sbjct: 200 QKLEKAENQVLAMRKQSEGLTKEYDRLLEEHAKLQ--AAVDGPMDKKEE 246
>X81109-1|CAA57015.1| 246|Homo sapiens tumor-associated antigen
protein.
Length = 246
Score = 46.0 bits (104), Expect = 1e-04
Identities = 23/49 (46%), Positives = 32/49 (65%)
Frame = +2
Query: 2 KELSKEKKDKEAVKSQAEGLNKEYDRLAEEHSKLQKKLTVSGEGDSKKD 148
++L K + A++ Q+EGL KEYDRL EEH+KLQ V G D K++
Sbjct: 200 QKLEKAENQVLAMRKQSEGLTKEYDRLLEEHAKLQ--AAVDGPMDKKEE 246
>U36341-2|AAA79508.1| 127|Homo sapiens CDM protein protein.
Length = 127
Score = 46.0 bits (104), Expect = 1e-04
Identities = 23/49 (46%), Positives = 32/49 (65%)
Frame = +2
Query: 2 KELSKEKKDKEAVKSQAEGLNKEYDRLAEEHSKLQKKLTVSGEGDSKKD 148
++L K + A++ Q+EGL KEYDRL EEH+KLQ V G D K++
Sbjct: 81 QKLEKAENQVLAMRKQSEGLTKEYDRLLEEHAKLQ--AAVDGPMDKKEE 127
>BC065292-1|AAH65292.1| 246|Homo sapiens B-cell receptor-associated
protein 31 protein.
Length = 246
Score = 46.0 bits (104), Expect = 1e-04
Identities = 23/49 (46%), Positives = 32/49 (65%)
Frame = +2
Query: 2 KELSKEKKDKEAVKSQAEGLNKEYDRLAEEHSKLQKKLTVSGEGDSKKD 148
++L K + A++ Q+EGL KEYDRL EEH+KLQ V G D K++
Sbjct: 200 QKLEKAENQVLAMRKQSEGLTKEYDRLLEEHAKLQ--AAVDGPMDKKEE 246
>BC014323-1|AAH14323.1| 246|Homo sapiens B-cell receptor-associated
protein 31 protein.
Length = 246
Score = 46.0 bits (104), Expect = 1e-04
Identities = 23/49 (46%), Positives = 32/49 (65%)
Frame = +2
Query: 2 KELSKEKKDKEAVKSQAEGLNKEYDRLAEEHSKLQKKLTVSGEGDSKKD 148
++L K + A++ Q+EGL KEYDRL EEH+KLQ V G D K++
Sbjct: 200 QKLEKAENQVLAMRKQSEGLTKEYDRLLEEHAKLQ--AAVDGPMDKKEE 246
>AK223059-1|BAD96779.1| 246|Homo sapiens B-cell receptor-associated
protein 31 variant protein.
Length = 246
Score = 46.0 bits (104), Expect = 1e-04
Identities = 23/49 (46%), Positives = 32/49 (65%)
Frame = +2
Query: 2 KELSKEKKDKEAVKSQAEGLNKEYDRLAEEHSKLQKKLTVSGEGDSKKD 148
++L K + A++ Q+EGL KEYDRL EEH+KLQ V G D K++
Sbjct: 200 QKLEKAENQVLAMRKQSEGLTKEYDRLLEEHAKLQ--AAVDGPMDKKEE 246
>AK222494-1|BAD96214.1| 246|Homo sapiens B-cell receptor-associated
protein 31 variant protein.
Length = 246
Score = 46.0 bits (104), Expect = 1e-04
Identities = 23/49 (46%), Positives = 32/49 (65%)
Frame = +2
Query: 2 KELSKEKKDKEAVKSQAEGLNKEYDRLAEEHSKLQKKLTVSGEGDSKKD 148
++L K + A++ Q+EGL KEYDRL EEH+KLQ V G D K++
Sbjct: 200 QKLEKAENQVLAMRKQSEGLTKEYDRLLEEHAKLQ--AAVDGPMDKKEE 246
>BT006981-1|AAP35627.1| 241|Homo sapiens B-cell receptor-associated
protein BAP29 protein.
Length = 241
Score = 41.5 bits (93), Expect = 0.002
Identities = 19/36 (52%), Positives = 27/36 (75%)
Frame = +2
Query: 8 LSKEKKDKEAVKSQAEGLNKEYDRLAEEHSKLQKKL 115
LSK + D +K Q+E L+KEYD+L +EHS+LQ +L
Sbjct: 198 LSKAQNDVMEMKMQSERLSKEYDQLLKEHSELQDRL 233
>BC008478-1|AAH08478.1| 241|Homo sapiens B-cell receptor-associated
protein 29 protein.
Length = 241
Score = 41.5 bits (93), Expect = 0.002
Identities = 19/36 (52%), Positives = 27/36 (75%)
Frame = +2
Query: 8 LSKEKKDKEAVKSQAEGLNKEYDRLAEEHSKLQKKL 115
LSK + D +K Q+E L+KEYD+L +EHS+LQ +L
Sbjct: 198 LSKAQNDVMEMKMQSERLSKEYDQLLKEHSELQDRL 233
>AF126020-1|AAF17230.1| 242|Homo sapiens B-cell receptor-associated
protein BAP29 protein.
Length = 242
Score = 41.5 bits (93), Expect = 0.002
Identities = 19/36 (52%), Positives = 27/36 (75%)
Frame = +2
Query: 8 LSKEKKDKEAVKSQAEGLNKEYDRLAEEHSKLQKKL 115
LSK + D +K Q+E L+KEYD+L +EHS+LQ +L
Sbjct: 199 LSKAQNDVMEMKMQSERLSKEYDQLLKEHSELQDRL 234
Score = 35.9 bits (79), Expect = 0.11
Identities = 16/44 (36%), Positives = 28/44 (63%)
Frame = +2
Query: 5 ELSKEKKDKEAVKSQAEGLNKEYDRLAEEHSKLQKKLTVSGEGD 136
+L+KE+ +K +K+QAE NK + EE+ KL++ L G+ +
Sbjct: 127 QLAKERSNKGVLKTQAENTNKAAKKFMEENEKLKRILKSHGKDE 170
>AC004839-1|AAC83971.1| 241|Homo sapiens unknown protein.
Length = 241
Score = 41.5 bits (93), Expect = 0.002
Identities = 19/36 (52%), Positives = 27/36 (75%)
Frame = +2
Query: 8 LSKEKKDKEAVKSQAEGLNKEYDRLAEEHSKLQKKL 115
LSK + D +K Q+E L+KEYD+L +EHS+LQ +L
Sbjct: 198 LSKAQNDVMEMKMQSERLSKEYDQLLKEHSELQDRL 233
>DQ109808-1|AAZ83370.1| 2479|Homo sapiens nephrocystin-6 protein.
Length = 2479
Score = 30.3 bits (65), Expect = 5.2
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +2
Query: 2 KELSKEKKDKEAVKSQAEGLNKEYDRLAEEHSKLQKK 112
KEL KEKK E + + E E +L E+ +L+KK
Sbjct: 136 KELEKEKKVNEQLALRNEEAENENSKLRRENKRLKKK 172
>BC043398-1|AAH43398.1| 805|Homo sapiens CEP290 protein protein.
Length = 805
Score = 30.3 bits (65), Expect = 5.2
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +2
Query: 2 KELSKEKKDKEAVKSQAEGLNKEYDRLAEEHSKLQKK 112
KEL KEKK E + + E E +L E+ +L+KK
Sbjct: 136 KELEKEKKVNEQLALRNEEAENENSKLRRENKRLKKK 172
>AK023677-1|BAB14636.1| 574|Homo sapiens protein ( Homo sapiens
cDNA FLJ13615 fis, clone PLACE1010896, weakly similar to
NUF1 PROTEIN. ).
Length = 574
Score = 30.3 bits (65), Expect = 5.2
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +2
Query: 2 KELSKEKKDKEAVKSQAEGLNKEYDRLAEEHSKLQKK 112
KEL KEKK E + + E E +L E+ +L+KK
Sbjct: 136 KELEKEKKVNEQLALRNEEAENENSKLRRENKRLKKK 172
>AF317887-1|AAK01919.1| 589|Homo sapiens monoclonal antibody 3H11
antigen protein.
Length = 589
Score = 30.3 bits (65), Expect = 5.2
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +2
Query: 2 KELSKEKKDKEAVKSQAEGLNKEYDRLAEEHSKLQKK 112
KEL KEKK E + + E E +L E+ +L+KK
Sbjct: 78 KELEKEKKVNEQLALRNEEAENENSKLRRENKRLKKK 114
>AL390294-1|CAH73142.1| 929|Homo sapiens TAF3 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 140kD
protein.
Length = 929
Score = 29.9 bits (64), Expect = 6.9
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 2 KELSKEKKDKEAVKSQAEGLNKEYDRLAEEHSKLQ 106
KE KEKK+KE K + E +E ++ +H K++
Sbjct: 712 KEKEKEKKEKEREKEKREREKREKEKEKHKHEKIK 746
>AL353754-1|CAH73451.1| 929|Homo sapiens TAF3 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 140kD
protein.
Length = 929
Score = 29.9 bits (64), Expect = 6.9
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 2 KELSKEKKDKEAVKSQAEGLNKEYDRLAEEHSKLQ 106
KE KEKK+KE K + E +E ++ +H K++
Sbjct: 712 KEKEKEKKEKEREKEKREREKREKEKEKHKHEKIK 746
>AL159172-1|CAI15661.1| 929|Homo sapiens TAF3 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 140kD
protein.
Length = 929
Score = 29.9 bits (64), Expect = 6.9
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 2 KELSKEKKDKEAVKSQAEGLNKEYDRLAEEHSKLQ 106
KE KEKK+KE K + E +E ++ +H K++
Sbjct: 712 KEKEKEKKEKEREKEKREREKREKEKEKHKHEKIK 746
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,357,293
Number of Sequences: 237096
Number of extensions: 846784
Number of successful extensions: 5100
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 4934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5090
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6098631048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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