Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0349
(586 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069750-1|AAL39895.1| 228|Drosophila melanogaster LP10861p pro... 72 5e-13
AE014296-144|AAN11453.1| 228|Drosophila melanogaster CG13887-PC... 72 5e-13
AE014296-143|AAF47419.1| 228|Drosophila melanogaster CG13887-PB... 72 5e-13
AE014134-3064|AAF53778.2| 868|Drosophila melanogaster CG31797-P... 35 0.070
AY118400-1|AAM48429.1| 608|Drosophila melanogaster RE60058p pro... 30 2.0
AL031863-1|CAA21315.1| 526|Drosophila melanogaster EG:EG0003.1 ... 30 2.0
AE013599-2369|AAF57936.2| 608|Drosophila melanogaster CG8910-PA... 30 2.0
AE014297-571|AAF54053.2| 901|Drosophila melanogaster CG10061-PA... 29 3.5
AE014134-2984|AAF53715.3| 1377|Drosophila melanogaster CG10600-P... 29 6.1
X66982-1|CAA47391.1| 577|Drosophila melanogaster factor 5 protein. 28 8.1
BT022829-1|AAY55245.1| 790|Drosophila melanogaster IP13307p pro... 28 8.1
AY060743-1|AAL28291.1| 509|Drosophila melanogaster GH19637p pro... 28 8.1
AY051733-1|AAK93157.1| 577|Drosophila melanogaster LD26157p pro... 28 8.1
AY051730-1|AAK93154.1| 550|Drosophila melanogaster LD25919p pro... 28 8.1
AF186472-1|AAF01416.1| 1409|Drosophila melanogaster condensin su... 28 8.1
AF185287-1|AAF13306.1| 1409|Drosophila melanogaster XCAP-C/SMC4 ... 28 8.1
AE014297-456|AAF54125.1| 577|Drosophila melanogaster CG10281-PA... 28 8.1
AE014134-2761|AAF53560.1| 1409|Drosophila melanogaster CG11397-P... 28 8.1
AE014134-630|AAF51090.1| 807|Drosophila melanogaster CG15415-PA... 28 8.1
AE013599-3103|AAM68189.1| 509|Drosophila melanogaster CG30291-P... 28 8.1
>AY069750-1|AAL39895.1| 228|Drosophila melanogaster LP10861p
protein.
Length = 228
Score = 72.1 bits (169), Expect = 5e-13
Identities = 31/44 (70%), Positives = 40/44 (90%)
Frame = +2
Query: 5 ELSKEKKDKEAVKSQAEGLNKEYDRLAEEHSKLQKKLTVSGEGD 136
+L++EKKDKEAVKSQAE +N+EYDRL EE+SKLQKK+T+ G G+
Sbjct: 182 DLNREKKDKEAVKSQAESINREYDRLTEEYSKLQKKITIGGGGN 225
>AE014296-144|AAN11453.1| 228|Drosophila melanogaster CG13887-PC,
isoform C protein.
Length = 228
Score = 72.1 bits (169), Expect = 5e-13
Identities = 31/44 (70%), Positives = 40/44 (90%)
Frame = +2
Query: 5 ELSKEKKDKEAVKSQAEGLNKEYDRLAEEHSKLQKKLTVSGEGD 136
+L++EKKDKEAVKSQAE +N+EYDRL EE+SKLQKK+T+ G G+
Sbjct: 182 DLNREKKDKEAVKSQAESINREYDRLTEEYSKLQKKITIGGGGN 225
>AE014296-143|AAF47419.1| 228|Drosophila melanogaster CG13887-PB,
isoform B protein.
Length = 228
Score = 72.1 bits (169), Expect = 5e-13
Identities = 31/44 (70%), Positives = 40/44 (90%)
Frame = +2
Query: 5 ELSKEKKDKEAVKSQAEGLNKEYDRLAEEHSKLQKKLTVSGEGD 136
+L++EKKDKEAVKSQAE +N+EYDRL EE+SKLQKK+T+ G G+
Sbjct: 182 DLNREKKDKEAVKSQAESINREYDRLTEEYSKLQKKITIGGGGN 225
>AE014134-3064|AAF53778.2| 868|Drosophila melanogaster CG31797-PA
protein.
Length = 868
Score = 35.1 bits (77), Expect = 0.070
Identities = 17/50 (34%), Positives = 29/50 (58%)
Frame = +2
Query: 2 KELSKEKKDKEAVKSQAEGLNKEYDRLAEEHSKLQKKLTVSGEGDSKKDE 151
KE +EKK +E K + +G +KE ++ E+ K ++K +G+G K E
Sbjct: 431 KEKEREKKKREKAKEKKKGKDKETEKKREKVKKKKEKNKETGKGKEKARE 480
>AY118400-1|AAM48429.1| 608|Drosophila melanogaster RE60058p
protein.
Length = 608
Score = 30.3 bits (65), Expect = 2.0
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 8/56 (14%)
Frame = +2
Query: 2 KELSKEKKDKEAVKSQAEGLNKEYDRLAEEHSKLQKK--------LTVSGEGDSKK 145
+E K K +KEA K + L KE +RLA+ H+K +KK L ++ +G+SKK
Sbjct: 554 EEKLKLKAEKEARKEEKR-LAKEEERLAKLHAKEEKKRGKKEAKELLLANDGNSKK 608
>AL031863-1|CAA21315.1| 526|Drosophila melanogaster EG:EG0003.1
protein.
Length = 526
Score = 30.3 bits (65), Expect = 2.0
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 8/56 (14%)
Frame = +2
Query: 2 KELSKEKKDKEAVKSQAEGLNKEYDRLAEEHSKLQKK--------LTVSGEGDSKK 145
+E K K +KEA K + L KE +RLA+ H+K +KK L ++ +G+SKK
Sbjct: 472 EEKLKLKAEKEARKEEKR-LAKEEERLAKLHAKEEKKRGKKEAKELLLANDGNSKK 526
>AE013599-2369|AAF57936.2| 608|Drosophila melanogaster CG8910-PA
protein.
Length = 608
Score = 30.3 bits (65), Expect = 2.0
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 8/56 (14%)
Frame = +2
Query: 2 KELSKEKKDKEAVKSQAEGLNKEYDRLAEEHSKLQKK--------LTVSGEGDSKK 145
+E K K +KEA K + L KE +RLA+ H+K +KK L ++ +G+SKK
Sbjct: 554 EEKLKLKAEKEARKEEKR-LAKEEERLAKLHAKEEKKRGKKEAKELLLANDGNSKK 608
>AE014297-571|AAF54053.2| 901|Drosophila melanogaster CG10061-PA
protein.
Length = 901
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = +2
Query: 11 SKEKKDKEAVKSQAEGLNKEYDRLAEEHSKLQKKLTVSGEGDSKKDE*ILDITECM 178
SKEKK+ A+K + EGL + + + H Q +L K+ D E +
Sbjct: 523 SKEKKEIAALKQEVEGLQLQLKQKEQAHVSAQARLRAQLRASEKEQRNYRDEIELL 578
>AE014134-2984|AAF53715.3| 1377|Drosophila melanogaster CG10600-PA
protein.
Length = 1377
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +2
Query: 5 ELSKEKKDKEAVKSQAEGLNKEYDRLAEEHSKLQKK 112
E K KKDK+ KS+ + +KE +R E+ + +KK
Sbjct: 993 EKEKLKKDKDKEKSRGKDRDKEKERGKEKEKEKEKK 1028
>X66982-1|CAA47391.1| 577|Drosophila melanogaster factor 5 protein.
Length = 577
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 2 KELSKEKKDKEAVKSQAEGLNKEYDRLAEEHSKLQKK 112
+E EKK E+ K A+G K+ D+ +E SK +KK
Sbjct: 344 EEEDDEKKSDESDKEDADGEKKKKDKGKDEVSKDKKK 380
>BT022829-1|AAY55245.1| 790|Drosophila melanogaster IP13307p
protein.
Length = 790
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/48 (27%), Positives = 28/48 (58%)
Frame = +2
Query: 2 KELSKEKKDKEAVKSQAEGLNKEYDRLAEEHSKLQKKLTVSGEGDSKK 145
+EL + ++ + +K + + L ++YD EE L+ KLT + + ++K
Sbjct: 88 QELEELRRKFKTLKEEQDVLQQDYDAKVEETRSLKDKLTAAEKNLAEK 135
>AY060743-1|AAL28291.1| 509|Drosophila melanogaster GH19637p
protein.
Length = 509
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/43 (25%), Positives = 26/43 (60%)
Frame = +2
Query: 2 KELSKEKKDKEAVKSQAEGLNKEYDRLAEEHSKLQKKLTVSGE 130
K++++ ++ + + +A LNK ++ +HS L ++L V G+
Sbjct: 130 KQMARLEQQADETQKRAHDLNKPESQILADHSALLEQLGVKGD 172
>AY051733-1|AAK93157.1| 577|Drosophila melanogaster LD26157p
protein.
Length = 577
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 2 KELSKEKKDKEAVKSQAEGLNKEYDRLAEEHSKLQKK 112
+E EKK E+ K A+G K+ D+ +E SK +KK
Sbjct: 344 EEEDDEKKSDESDKEDADGEKKKKDKGKDEVSKDKKK 380
>AY051730-1|AAK93154.1| 550|Drosophila melanogaster LD25919p
protein.
Length = 550
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +2
Query: 2 KELSKEKKDKEAVKSQAEGLNKEYDRLAEEHSK 100
KE+ + + E KSQ+ + KE D + +E +K
Sbjct: 129 KEIEESEASIEGAKSQSSDIKKEIDEITKEENK 161
>AF186472-1|AAF01416.1| 1409|Drosophila melanogaster condensin subunit
SMC4 protein.
Length = 1409
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +2
Query: 2 KELSKEKKDKEAVKSQAEGLNKEYDRLAEEHSK 100
KE+ + + E KSQ+ + KE D + +E +K
Sbjct: 988 KEIEESEASIEGAKSQSSDIKKEIDEITKEENK 1020
>AF185287-1|AAF13306.1| 1409|Drosophila melanogaster XCAP-C/SMC4
homolog Gluon protein.
Length = 1409
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +2
Query: 2 KELSKEKKDKEAVKSQAEGLNKEYDRLAEEHSK 100
KE+ + + E KSQ+ + KE D + +E +K
Sbjct: 988 KEMEESEASIEGAKSQSSDIKKEIDEITKEENK 1020
>AE014297-456|AAF54125.1| 577|Drosophila melanogaster CG10281-PA
protein.
Length = 577
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 2 KELSKEKKDKEAVKSQAEGLNKEYDRLAEEHSKLQKK 112
+E EKK E+ K A+G K+ D+ +E SK +KK
Sbjct: 344 EEEDDEKKSDESDKEDADGEKKKKDKGKDEVSKDKKK 380
>AE014134-2761|AAF53560.1| 1409|Drosophila melanogaster CG11397-PA
protein.
Length = 1409
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +2
Query: 2 KELSKEKKDKEAVKSQAEGLNKEYDRLAEEHSK 100
KE+ + + E KSQ+ + KE D + +E +K
Sbjct: 988 KEIEESEASIEGAKSQSSDIKKEIDEITKEENK 1020
>AE014134-630|AAF51090.1| 807|Drosophila melanogaster CG15415-PA
protein.
Length = 807
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/48 (27%), Positives = 28/48 (58%)
Frame = +2
Query: 2 KELSKEKKDKEAVKSQAEGLNKEYDRLAEEHSKLQKKLTVSGEGDSKK 145
+EL + ++ + +K + + L ++YD EE L+ KLT + + ++K
Sbjct: 78 QELEELRRKFKTLKEEQDVLQQDYDAKVEETRSLKDKLTAAEKNLAEK 125
>AE013599-3103|AAM68189.1| 509|Drosophila melanogaster CG30291-PA
protein.
Length = 509
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/43 (25%), Positives = 26/43 (60%)
Frame = +2
Query: 2 KELSKEKKDKEAVKSQAEGLNKEYDRLAEEHSKLQKKLTVSGE 130
K++++ ++ + + +A LNK ++ +HS L ++L V G+
Sbjct: 130 KQMARLEQQADETQKRAHDLNKPESQILADHSALLEQLGVKGD 172
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,244,156
Number of Sequences: 53049
Number of extensions: 271221
Number of successful extensions: 979
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 979
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2338128087
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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