Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0349
(586 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g42570.1 68418.m05183 expressed protein low similarity to SP|... 38 0.007
At5g05210.1 68418.m00555 nucleolar matrix protein-related contai... 34 0.080
At1g29000.1 68414.m03546 heavy-metal-associated domain-containin... 32 0.24
At5g41020.1 68418.m04986 myb family transcription factor contain... 31 0.43
At3g16000.1 68416.m02024 matrix-localized MAR DNA-binding protei... 30 0.99
At1g15200.1 68414.m01817 protein-protein interaction regulator f... 30 1.3
At4g09940.1 68417.m01627 avirulence-responsive family protein / ... 29 2.3
At1g20400.1 68414.m02544 myosin heavy chain-related 29 2.3
At2g22795.1 68415.m02704 expressed protein 28 4.0
At5g03060.1 68418.m00254 expressed protein ; expression supporte... 28 5.3
At3g28070.2 68416.m03504 nodulin MtN21 family protein similar to... 27 7.0
At3g28070.1 68416.m03503 nodulin MtN21 family protein similar to... 27 7.0
At4g02720.1 68417.m00368 expressed protein temporary automated f... 27 9.2
At3g47270.1 68416.m05135 hypothetical protein similar to At2g049... 27 9.2
At2g46640.1 68415.m05818 hypothetical protein and genefinder; e... 27 9.2
At1g75310.1 68414.m08748 DNAJ heat shock N-terminal domain-conta... 27 9.2
At1g25240.1 68414.m03132 epsin N-terminal homology (ENTH) domain... 27 9.2
At1g05290.1 68414.m00535 hypothetical protein 27 9.2
>At5g42570.1 68418.m05183 expressed protein low similarity to
SP|P51572 B-cell receptor-associated protein 31 (6C6-AG
tumor-associated antigen) (DXS1357E) {Homo sapiens}
Length = 218
Score = 37.5 bits (83), Expect = 0.007
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +2
Query: 2 KELSKEKKDKEAVKSQAEGLNKEYDRLAEEHSKLQKKLTVSGEGDSKK 145
KEL + + EA++ QA+G EYDRL E++ L+ +L G K
Sbjct: 168 KELKGAQGETEALRKQADGFLMEYDRLLEDNQNLRNQLESIGHSPEGK 215
>At5g05210.1 68418.m00555 nucleolar matrix protein-related contains
Pfam domain, PF04935: Surfeit locus protein 6
Length = 386
Score = 33.9 bits (74), Expect = 0.080
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = +2
Query: 5 ELSKEKKDKEAVKSQAEGLNKEYDRLAEEHSKLQKKLTVSGEGDSKKD 148
+L KEK +KE + SQ + L K++ L E+ + +K T + DSKK+
Sbjct: 91 DLLKEKIEKERLASQKQKLKKKHADLREQKLEQEKSGTELPDDDSKKE 138
>At1g29000.1 68414.m03546 heavy-metal-associated domain-containing
protein similar to farnesylated protein ATFP3
[GI:4097547]; contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 287
Score = 32.3 bits (70), Expect = 0.24
Identities = 15/55 (27%), Positives = 31/55 (56%)
Frame = +2
Query: 5 ELSKEKKDKEAVKSQAEGLNKEYDRLAEEHSKLQKKLTVSGEGDSKKDE*ILDIT 169
E K+K++++ K + E K+ D +E K +++ EG+ KK+E +++T
Sbjct: 183 EEEKKKEEEDKKKKEEEDKKKKEDEKKKEEEKKKEEENKKKEGEKKKEEVKVEVT 237
>At5g41020.1 68418.m04986 myb family transcription factor contains
Pfam profile: PF00249 Myb DNA binding domain
Length = 588
Score = 31.5 bits (68), Expect = 0.43
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +2
Query: 2 KELSKEKKDKEAVKSQAEGLNKEYDRLAEEHSKLQKKLTVSGEGDSKKDE*ILDIT 169
K+ K+KK E +++ GLN D K +KK + E + K D+ D+T
Sbjct: 211 KKKRKKKKQSEDSETEENGLNSTKDAKKRRKKKKKKKQSEVSEAEEKSDKSDEDLT 266
>At3g16000.1 68416.m02024 matrix-localized MAR DNA-binding
protein-related similar to matrix-localized MAR DNA
binding protein MFP1 GI:1771158 from [Lycopersicon
esculentum]
Length = 726
Score = 30.3 bits (65), Expect = 0.99
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +2
Query: 2 KELSKEKKDKEAVKSQAEGLNKEYDRLAEEHSKLQKKL 115
+ELS EKK E +K Q E L + E+ L+ KL
Sbjct: 220 RELSSEKKLCEKLKDQIESLENSLSKAGEDKEALETKL 257
>At1g15200.1 68414.m01817 protein-protein interaction regulator
family protein contains Pfam PF04696: pinin/SDK/memA/
protein conserved region
Length = 423
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 6/61 (9%)
Frame = +2
Query: 2 KELSKEKKDKEAVKSQAEGLN------KEYDRLAEEHSKLQKKLTVSGEGDSKKDE*ILD 163
KEL + + ++A K+ EG+N KE + EH ++K+ G GD +++ + D
Sbjct: 319 KELERWQNARKARKANNEGMNLQETMDKELETHRMEHGPKKRKIPGGGVGDEDEEDEVED 378
Query: 164 I 166
I
Sbjct: 379 I 379
>At4g09940.1 68417.m01627 avirulence-responsive family protein /
avirulence induced gene (AIG1) family protein similar to
AIG1 protein SP:P54120 (Arabidopsis thaliana); contains
Pfam PF04548: AIG1 family;
Length = 394
Score = 29.1 bits (62), Expect = 2.3
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = +2
Query: 2 KELSKEKKDKEAVKSQ---AEGLNKEYDRLAEEHSKLQK 109
K L E + KEAVK E LNKE R+ + + LQK
Sbjct: 348 KRLESESRAKEAVKQSNGVVENLNKELARIKQMATDLQK 386
>At1g20400.1 68414.m02544 myosin heavy chain-related
Length = 944
Score = 29.1 bits (62), Expect = 2.3
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +2
Query: 5 ELSKEKKDKEAVKSQAEGLNKEYDRLAEEHSKLQKKLTVSGEGDSKKDE*ILDI 166
ELS EKK + + + E +KE L E + L + TV GE ++D LD+
Sbjct: 711 ELSAEKKKNDELLKKLESASKEAAHLKSEVATLAYQRTVMGE---ERDRCTLDL 761
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 28.3 bits (60), Expect = 4.0
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +2
Query: 2 KELSKEKKDKEAVKSQAEGLNKEYDRLAEEHSKLQKKLTVSGEGDSKKDE 151
KE EK +KE Q E KE +++ +E S Q++ T E ++K+ E
Sbjct: 578 KEKENEKIEKEESAPQEETKEKENEKIEKEESASQEE-TKEKETETKEKE 626
>At5g03060.1 68418.m00254 expressed protein ; expression supported
by MPSS
Length = 292
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/48 (25%), Positives = 27/48 (56%)
Frame = +2
Query: 2 KELSKEKKDKEAVKSQAEGLNKEYDRLAEEHSKLQKKLTVSGEGDSKK 145
K+L KE+ +KE + +G+ E + + + S ++L ++ E + +K
Sbjct: 90 KDLEKERSEKEEYMKEMKGMISEKEAIINDLSVKNQELLIAKEEEVEK 137
>At3g28070.2 68416.m03504 nodulin MtN21 family protein similar to
MtN21 [Medicago truncatula] GI:2598575
Length = 268
Score = 27.5 bits (58), Expect = 7.0
Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +2
Query: 167 TECMSLILMKLNVVYAASSITV-LIYFKSILIIVCHLLFKCFQKVALHIWTLESA*PQTL 343
T C+S++ + +V ++ +V +I+F LI + + +H WT+ P L
Sbjct: 137 TVCVSIVTSTIGLVVEKNNPSVWIIHFDITLITIVTMAIVTSVYYVIHSWTVRHKGPLYL 196
Query: 344 LIMK 355
I K
Sbjct: 197 AIFK 200
>At3g28070.1 68416.m03503 nodulin MtN21 family protein similar to
MtN21 [Medicago truncatula] GI:2598575
Length = 360
Score = 27.5 bits (58), Expect = 7.0
Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +2
Query: 167 TECMSLILMKLNVVYAASSITV-LIYFKSILIIVCHLLFKCFQKVALHIWTLESA*PQTL 343
T C+S++ + +V ++ +V +I+F LI + + +H WT+ P L
Sbjct: 229 TVCVSIVTSTIGLVVEKNNPSVWIIHFDITLITIVTMAIVTSVYYVIHSWTVRHKGPLYL 288
Query: 344 LIMK 355
I K
Sbjct: 289 AIFK 292
>At4g02720.1 68417.m00368 expressed protein temporary automated
functional assignment
Length = 422
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = +2
Query: 14 KEKKDKEAVKSQAEGLNKEYDRLAEEHSKLQKKLTVSGEGDSKKDE 151
KE+K K +S+++GL + SK ++K + + +S+ E
Sbjct: 96 KERKGKSDSESESDGLRSRKRKSKSSRSKRRRKRSYDSDSESEGSE 141
>At3g47270.1 68416.m05135 hypothetical protein similar to At2g04970,
At2g15200, At1g32830, At2g14140, At3g30450, At4g03990,
At5g34895, At2g02200
Length = 671
Score = 27.1 bits (57), Expect = 9.2
Identities = 11/44 (25%), Positives = 24/44 (54%)
Frame = +2
Query: 17 EKKDKEAVKSQAEGLNKEYDRLAEEHSKLQKKLTVSGEGDSKKD 148
EKK++E K + EG +E +++ + +K + +GD + +
Sbjct: 300 EKKEQEEEKQEEEGKEEELEKVEYRGDERTEKQEIPKQGDEEME 343
>At2g46640.1 68415.m05818 hypothetical protein and genefinder;
expression supported by MPSS
Length = 310
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = +2
Query: 155 ILDITECMSLILMKLNVVYAASSITVLIYFKSILIIVCHLLFKCF 289
+L I EC+ +++ + ++IT L+ F ++ IV + CF
Sbjct: 256 LLKIQECVGIVMTVEMYCFLLTNITKLLVFVPVMHIVFYYYVICF 300
>At1g75310.1 68414.m08748 DNAJ heat shock N-terminal domain-containing
protein low similarity to SP|Q27974 Auxilin {Bos taurus};
contains Pfam profile PF00226: DnaJ domain
Length = 1448
Score = 27.1 bits (57), Expect = 9.2
Identities = 20/60 (33%), Positives = 27/60 (45%)
Frame = +2
Query: 44 SQAEGLNKEYDRLAEEHSKLQKKLTVSGEGDSKKDE*ILDITECMSLILMKLNVVYAASS 223
SQAE + E + EE +++ L V GD K+ E EC + NV A SS
Sbjct: 1010 SQAESKHDELEETKEESDEMKTSLGVERNGDKKELE---HQFECQENETYRSNVEAAESS 1066
>At1g25240.1 68414.m03132 epsin N-terminal homology (ENTH)
domain-containing protein / clathrin assembly
protein-related contains Pfam PF01417: ENTH domain. ENTH
(Epsin N-terminal homology) domain; similar to clathrin
assembly protein AP180 (GI:6492344) [Xenopus laevis]
Length = 376
Score = 27.1 bits (57), Expect = 9.2
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +2
Query: 41 KSQAEGLNKEYDRLAEEHSKLQKKLTVSGEGDSKKDE*ILDITECM 178
K Q + +N+E +R+ + S L L + D+ K IL+ +C+
Sbjct: 159 KPQLDSVNQELERIEKLQSLLHMLLQIRPMADNMKKTLILEAMDCV 204
>At1g05290.1 68414.m00535 hypothetical protein
Length = 351
Score = 27.1 bits (57), Expect = 9.2
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -1
Query: 340 CLWLS*FQSPDV*CNFLKTFK*QVTNYY*YTFKIDQHSNTRS 215
CL S F +P+V FL + ++Y Y F +D S++ S
Sbjct: 37 CLCQSCFSNPNVISRFLLLLRNDASDYSAYNFPLDLDSSSSS 78
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,461,554
Number of Sequences: 28952
Number of extensions: 133798
Number of successful extensions: 496
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 468
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 495
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1151426952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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