Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0346
         (688 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    25   2.2  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   3.9  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   6.8  
AY324313-1|AAQ89698.1|  160|Anopheles gambiae insulin-like pepti...    23   6.8  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   9.0  
AJ000037-1|CAA03873.1|   94|Anopheles gambiae D3 protein protein.      23   9.0  

>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
 Frame = +2

Query: 365 IDNLTDADSLTSSTETEVFKSVGDSDSACSD----ESGYSEFLD 484
           +DNL DADSLT+  + E     G+ +    +    E G   F+D
Sbjct: 715 VDNLADADSLTTVEKEEGDNPDGEEEKLSHEPTPTEHGDDGFMD 758


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +3

Query: 444  APAVMNQATPSSWMERKALLGTLL 515
            A A  N   P+ W  +KALLG L+
Sbjct: 2706 ASAANNSWNPAKWELKKALLGGLV 2729


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 23/97 (23%), Positives = 40/97 (41%)
 Frame = -2

Query: 456 SLQALSLSPTLLNTSVSVLEVRLSASVRLSIRDSKFSSKLLKILALRGGYVDLRRNPFFS 277
           SL  L         SV  L + ++     S     +  +L       GG    +  P  S
Sbjct: 133 SLSTLETQTATAGASVQSLPIAIATGATSSTVSLTYEDELSP-----GGSARRKTKPN-S 186

Query: 276 PIGT*FTSLE*LPILSPVSSATLSSWGNDGREVGSES 166
           P+G+   ++   P+LS +SSA+  +  ++G  + S S
Sbjct: 187 PLGSLLAAVT-SPVLSRISSASSPNLSSNGSTLSSPS 222


>AY324313-1|AAQ89698.1|  160|Anopheles gambiae insulin-like peptide
           6 precursor protein.
          Length = 160

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +3

Query: 438 ATAPAVMNQATPSSWMER 491
           AT PA MN   PS++M R
Sbjct: 99  ATVPAWMNMVYPSNYMYR 116


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +2

Query: 140 CETASTAASDSEPTSLPSLPQEDKV 214
           C   S++  DS+P+S  S P++  +
Sbjct: 894 CTNGSSSGRDSQPSSARSTPKKQNL 918


>AJ000037-1|CAA03873.1|   94|Anopheles gambiae D3 protein protein.
          Length = 94

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -2

Query: 138 PEETDPSSLSVTRKLLDNLH 79
           P+ETD   +SV+ + + +LH
Sbjct: 30  PDETDQCQISVSAETMKSLH 49


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 643,506
Number of Sequences: 2352
Number of extensions: 12727
Number of successful extensions: 19
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)