Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0346
         (688 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF338650-1|AAK07661.1| 2641|Homo sapiens PDZ domain-containing p...    36   0.18 
AB002298-1|BAA20760.2| 2847|Homo sapiens KIAA0300 protein.             36   0.18 
D87717-1|BAA13442.2| 1086|Homo sapiens KIAA0013 protein.               34   0.41 
BC063444-1|AAH63444.1|  501|Homo sapiens Rho GTPase activating p...    34   0.41 
BC039563-1|AAH39563.1| 1023|Homo sapiens Rho GTPase activating p...    34   0.41 
AF094508-1|AAD16120.1|  788|Homo sapiens dentin phosphoryn protein.    31   2.9  

>AF338650-1|AAK07661.1| 2641|Homo sapiens PDZ domain-containing
            protein AIPC protein.
          Length = 2641

 Score = 35.5 bits (78), Expect = 0.18
 Identities = 16/53 (30%), Positives = 27/53 (50%)
 Frame = +2

Query: 317  LSASILSNFEENFESLIDNLTDADSLTSSTETEVFKSVGDSDSACSDESGYSE 475
            ++ + LSN+  NF S  ++ T    L  STE  +    GD++ + SD    +E
Sbjct: 1317 VNKNFLSNYSRNFSSFHEDSTSLSGLGDSTEPSLSSMYGDAEDSSSDPESLTE 1369


>AB002298-1|BAA20760.2| 2847|Homo sapiens KIAA0300 protein.
          Length = 2847

 Score = 35.5 bits (78), Expect = 0.18
 Identities = 16/53 (30%), Positives = 27/53 (50%)
 Frame = +2

Query: 317  LSASILSNFEENFESLIDNLTDADSLTSSTETEVFKSVGDSDSACSDESGYSE 475
            ++ + LSN+  NF S  ++ T    L  STE  +    GD++ + SD    +E
Sbjct: 1523 VNKNFLSNYSRNFSSFHEDSTSLSGLGDSTEPSLSSMYGDAEDSSSDPESLTE 1575


>D87717-1|BAA13442.2| 1086|Homo sapiens KIAA0013 protein.
          Length = 1086

 Score = 34.3 bits (75), Expect = 0.41
 Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
 Frame = +2

Query: 152 STAASDSEPTSLPSL-PQEDKVAEETGDRIGNYSNEVNHVPIGEKNGFRRRSTYPPLSAS 328
           S A +  +P   PS+ PQE+++A+ +   +    N    +P+   +GF  +        S
Sbjct: 354 SGALNKFKPNRTPSITPQEERIAQLSESPVILTPNAKRTLPVDSSHGFSSKK-----RKS 408

Query: 329 ILSNFEENFESLIDNLTDADSLTSSTETEVFKSVGDSDSACS 454
           I  NF  NFE L  NL ++ S   S   +   S G S S+ S
Sbjct: 409 IKHNF--NFELLPSNLFNSSSTPVSVHIDT-SSEGSSQSSLS 447


>BC063444-1|AAH63444.1|  501|Homo sapiens Rho GTPase activating
           protein 11A protein.
          Length = 501

 Score = 34.3 bits (75), Expect = 0.41
 Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
 Frame = +2

Query: 152 STAASDSEPTSLPSL-PQEDKVAEETGDRIGNYSNEVNHVPIGEKNGFRRRSTYPPLSAS 328
           S A +  +P   PS+ PQE+++A+ +   +    N    +P+   +GF  +        S
Sbjct: 291 SGALNKFKPNRTPSITPQEERIAQLSESPVILTPNAKRTLPVDSSHGFSSKK-----RKS 345

Query: 329 ILSNFEENFESLIDNLTDADSLTSSTETEVFKSVGDSDSACS 454
           I  NF  NFE L  NL ++ S   S   +   S G S S+ S
Sbjct: 346 IKHNF--NFELLPSNLFNSSSTPVSVHIDT-SSEGSSQSSLS 384


>BC039563-1|AAH39563.1| 1023|Homo sapiens Rho GTPase activating
           protein 11A protein.
          Length = 1023

 Score = 34.3 bits (75), Expect = 0.41
 Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
 Frame = +2

Query: 152 STAASDSEPTSLPSL-PQEDKVAEETGDRIGNYSNEVNHVPIGEKNGFRRRSTYPPLSAS 328
           S A +  +P   PS+ PQE+++A+ +   +    N    +P+   +GF  +        S
Sbjct: 291 SGALNKFKPNRTPSITPQEERIAQLSESPVILTPNAKRTLPVDSSHGFSSKK-----RKS 345

Query: 329 ILSNFEENFESLIDNLTDADSLTSSTETEVFKSVGDSDSACS 454
           I  NF  NFE L  NL ++ S   S   +   S G S S+ S
Sbjct: 346 IKHNF--NFELLPSNLFNSSSTPVSVHIDT-SSEGSSQSSLS 384


>AF094508-1|AAD16120.1|  788|Homo sapiens dentin phosphoryn protein.
          Length = 788

 Score = 31.5 bits (68), Expect = 2.9
 Identities = 30/115 (26%), Positives = 50/115 (43%)
 Frame = +2

Query: 152 STAASDSEPTSLPSLPQEDKVAEETGDRIGNYSNEVNHVPIGEKNGFRRRSTYPPLSASI 331
           S+  SDS  +S  S   +   + ++ D   + S+  N     + +     S     S S 
Sbjct: 188 SSDNSDSSDSSNSSNSSDSSDSSDSSDSSSS-SDSSNSSDSSDSSDSSNSSESSDSSDSS 246

Query: 332 LSNFEENFESLIDNLTDADSLTSSTETEVFKSVGDSDSACSDESGYSEFLDGKES 496
            S+  ++ +S   N +D+DS  SS  ++   S   SDS  SD S  S+  D  +S
Sbjct: 247 DSDSSDSSDSSNSNSSDSDSSNSSDSSDSSNSSDSSDS--SDSSNSSDSSDSSDS 299


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,840,753
Number of Sequences: 237096
Number of extensions: 1670566
Number of successful extensions: 4506
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4278
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4493
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)