Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0343
         (365 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00006CFCCB Cluster: hypothetical protein TTHERM_0059...    32   2.8  
UniRef50_UPI00006CBD19 Cluster: hypothetical protein TTHERM_0015...    32   3.7  
UniRef50_Q4U8I4 Cluster: Putative uncharacterized protein; n=2; ...    31   4.9  
UniRef50_A5AYZ5 Cluster: Putative uncharacterized protein; n=1; ...    31   6.5  
UniRef50_A7RF42 Cluster: Predicted protein; n=1; Nematostella ve...    31   6.5  
UniRef50_Q05FH8 Cluster: DNA-directed RNA polymerase subunit bet...    31   6.5  
UniRef50_Q72QI1 Cluster: Glycosyltransferase; n=7; Leptospira|Re...    31   8.6  

>UniRef50_UPI00006CFCCB Cluster: hypothetical protein
           TTHERM_00599980; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00599980 - Tetrahymena
           thermophila SB210
          Length = 454

 Score = 32.3 bits (70), Expect = 2.8
 Identities = 21/65 (32%), Positives = 31/65 (47%)
 Frame = +3

Query: 57  KNAYAVAYIKLKKKVYIVASDI*SWNLDSRAFQIQLYLCVFKNRTVYILIFLYTPKLI*K 236
           K AY   Y  +    Y+++S+  SW+  S+   +     VF N  + I  F YT KL+  
Sbjct: 348 KKAYKFEYNNIGHGAYLISSNGYSWSHSSKEDNMANKSFVFSNDDIIICEFDYTKKLLTF 407

Query: 237 K*QFT 251
           K Q T
Sbjct: 408 KKQKT 412


>UniRef50_UPI00006CBD19 Cluster: hypothetical protein
           TTHERM_00151100; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00151100 - Tetrahymena
           thermophila SB210
          Length = 1283

 Score = 31.9 bits (69), Expect = 3.7
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = +3

Query: 9   IRHEGIIRRLENRNKIKNAYAVAYIKLKKKVYIVASDI*SW 131
           + ++  I  LEN N+IKN   V Y +LK K     S++ SW
Sbjct: 519 VNYQQDISNLENINQIKNLKGVQYFQLKSKGSDYISNLQSW 559


>UniRef50_Q4U8I4 Cluster: Putative uncharacterized protein; n=2;
            Theileria|Rep: Putative uncharacterized protein -
            Theileria annulata
          Length = 1272

 Score = 31.5 bits (68), Expect = 4.9
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +1

Query: 262  SDHIGQCVMNIVKDFEFEGMTEAVEFGAGLAWRL 363
            SDH+   + + V +FE E   E VE G+ L W L
Sbjct: 963  SDHLTNSLFDEVMEFELESPIEDVELGSKLIWSL 996


>UniRef50_A5AYZ5 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 231

 Score = 31.1 bits (67), Expect = 6.5
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -1

Query: 209 KNKYVYSSIFKHTKVKLNLKSARIEIPTSNVR 114
           K+K  ++S+FKH KV  +L  A  E+  S +R
Sbjct: 132 KSKSTHASVFKHIKVSFSLSGASHEVKKSAIR 163


>UniRef50_A7RF42 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 967

 Score = 31.1 bits (67), Expect = 6.5
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = -3

Query: 198 CIQFDF*THKGKAEFEKRANRDSNFKCPKLQCTLFFLILCR 76
           C Q +  TH G+  + K AN++   +CPK Q  +   + C+
Sbjct: 764 CTQENSATHCGRCRYAKAANKECKRECPKGQLAIGVTLDCK 804


>UniRef50_Q05FH8 Cluster: DNA-directed RNA polymerase subunit beta;
            n=3; Candidatus Carsonella ruddii|Rep: DNA-directed RNA
            polymerase subunit beta - Carsonella ruddii (strain PV)
          Length = 1267

 Score = 31.1 bits (67), Expect = 6.5
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = +3

Query: 51   KIKNAYAVAYIKLKKKVYIVASDI*SWNLDSRAFQIQLYLCVFKN 185
            KIKN   ++Y K+K  + I+   I   N++   F   L L +FKN
Sbjct: 1058 KIKNLNKISYFKMKLFIKIIFKCIYDKNINLNIFNNSLVLKIFKN 1102


>UniRef50_Q72QI1 Cluster: Glycosyltransferase; n=7; Leptospira|Rep:
           Glycosyltransferase - Leptospira interrogans serogroup
           Icterohaemorrhagiae serovarcopenhageni
          Length = 340

 Score = 30.7 bits (66), Expect = 8.6
 Identities = 17/49 (34%), Positives = 26/49 (53%)
 Frame = -1

Query: 218 CI*KNKYVYSSIFKHTKVKLNLKSARIEIPTSNVRSYNVHFFF*FYVGN 72
           C+ KN+    +++   K K+ LK+ RI I    +  Y+ H F  FY GN
Sbjct: 199 CVLKNEQAGVALWNVEKYKIELKNGRIFIDDVLLVFYHFHMFK-FYAGN 246


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 358,175,055
Number of Sequences: 1657284
Number of extensions: 6551877
Number of successful extensions: 16768
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 16062
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16728
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 13220924981
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)