Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0343
         (365 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   1.3  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   1.3  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   3.0  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   3.9  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    21   5.2  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   5.2  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    20   6.9  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    20   9.1  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    20   9.1  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +1

Query: 139 IRALFKFSFTFVCLKIELYTYLFFYIHRS*FKK 237
           I A F F   F+CL    Y +   YI+ +  +K
Sbjct: 69  ISAHFSFMSRFLCLPFYSYFFYLSYIYTTYSRK 101


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +1

Query: 139 IRALFKFSFTFVCLKIELYTYLFFYIHRS*FKK 237
           I A F F   F+CL    Y +   YI+ +  +K
Sbjct: 25  ISAHFSFMSRFLCLPFYSYFFYLSYIYTTYSRK 57


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 3.0
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 2   CRNSARGDYSQAG 40
           C+N AR DYS  G
Sbjct: 798 CKNCARVDYSMNG 810


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
          transcriptase andRNase H protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 3.9
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +1

Query: 1  LQEFGTRGLFAGWKIETKLKTHMP 72
          LQEFG RG   G  ++   + H P
Sbjct: 5  LQEFGKRGRSTGRGLKYSGQQHGP 28


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
          protein.
          Length = 383

 Score = 20.6 bits (41), Expect = 5.2
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 77 GNGICVFNFVSIFQPAN 27
          GN +C F   +I++P N
Sbjct: 21 GNVVCYFTSWTIYRPDN 37


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 20.6 bits (41), Expect = 5.2
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -3

Query: 102 TLFFLILCRQRHMRF 58
           TLF +I+C +R++ +
Sbjct: 5   TLFMIIICFERNLSY 19


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 20.2 bits (40), Expect = 6.9
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 292 IVKDFEFEGMTEAVEF 339
           +VK+F F+G+  A EF
Sbjct: 134 LVKNFGFDGLDLAWEF 149


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
          protein.
          Length = 384

 Score = 19.8 bits (39), Expect = 9.1
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 77 GNGICVFNFVSIFQPAN 27
          GN +C F   +I++P N
Sbjct: 22 GNVVCYFASWTIYRPDN 38


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
          protein.
          Length = 384

 Score = 19.8 bits (39), Expect = 9.1
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 77 GNGICVFNFVSIFQPAN 27
          GN +C F   +I++P N
Sbjct: 22 GNVVCYFASWTIYRPDN 38


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,859
Number of Sequences: 336
Number of extensions: 1843
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7510735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)