Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0343
         (365 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK124805-1|BAC85954.1|  189|Homo sapiens protein ( Homo sapiens ...    29   4.6  
BC033674-1|AAH33674.1|  283|Homo sapiens bol, boule-like (Drosop...    28   8.0  
AM295005-1|CAL25726.1|  289|Homo sapiens boll protein protein.         28   8.0  
AK093453-1|BAC04171.1|  339|Homo sapiens protein ( Homo sapiens ...    28   8.0  
AK058099-1|BAB71664.1|  283|Homo sapiens protein ( Homo sapiens ...    28   8.0  
AF272858-1|AAK58689.1|  283|Homo sapiens BOULE protein.                28   8.0  
AC011997-1|AAX93045.1|  283|Homo sapiens unknown protein.              28   8.0  

>AK124805-1|BAC85954.1|  189|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42815 fis, clone BRCAN2014143. ).
          Length = 189

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +1

Query: 163 FTFVCLKIELYTYLFFYIH 219
           +T++C+ I +Y YL  Y+H
Sbjct: 30  YTYICMYIHIYPYLCMYVH 48


>BC033674-1|AAH33674.1|  283|Homo sapiens bol, boule-like
           (Drosophila) protein.
          Length = 283

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -2

Query: 337 IPPPLSCLQTRNPSRYSSH 281
           +PPPLS ++T  P  YS H
Sbjct: 230 VPPPLSLMETSVPEPYSDH 248


>AM295005-1|CAL25726.1|  289|Homo sapiens boll protein protein.
          Length = 289

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -2

Query: 337 IPPPLSCLQTRNPSRYSSH 281
           +PPPLS ++T  P  YS H
Sbjct: 236 VPPPLSLMETSVPEPYSDH 254


>AK093453-1|BAC04171.1|  339|Homo sapiens protein ( Homo sapiens
           cDNA FLJ36134 fis, clone TESTI2024648, weakly similar to
           Homo sapiens germline specific RNA binding protein
           (DAZL1) mRNA. ).
          Length = 339

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -2

Query: 337 IPPPLSCLQTRNPSRYSSH 281
           +PPPLS ++T  P  YS H
Sbjct: 258 VPPPLSLMETSVPEPYSDH 276


>AK058099-1|BAB71664.1|  283|Homo sapiens protein ( Homo sapiens
           cDNA FLJ25370 fis, clone TST01870. ).
          Length = 283

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -2

Query: 337 IPPPLSCLQTRNPSRYSSH 281
           +PPPLS ++T  P  YS H
Sbjct: 230 VPPPLSLMETSVPEPYSDH 248


>AF272858-1|AAK58689.1|  283|Homo sapiens BOULE protein.
          Length = 283

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -2

Query: 337 IPPPLSCLQTRNPSRYSSH 281
           +PPPLS ++T  P  YS H
Sbjct: 230 VPPPLSLMETSVPEPYSDH 248


>AC011997-1|AAX93045.1|  283|Homo sapiens unknown protein.
          Length = 283

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -2

Query: 337 IPPPLSCLQTRNPSRYSSH 281
           +PPPLS ++T  P  YS H
Sbjct: 230 VPPPLSLMETSVPEPYSDH 248


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,463,113
Number of Sequences: 237096
Number of extensions: 937076
Number of successful extensions: 1700
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1699
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2306171440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)