Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0339
(542 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O28565 Cluster: Type I restriction-modification enzyme,... 36 0.60
UniRef50_UPI00006CA6D2 Cluster: hypothetical protein TTHERM_0068... 35 1.1
UniRef50_Q6LQS6 Cluster: Putative uncharacterized protein BLL486... 35 1.4
UniRef50_Q297C1 Cluster: GA16032-PA; n=1; Drosophila pseudoobscu... 34 2.4
UniRef50_Q64AA2 Cluster: ATP-binding protein; n=1; uncultured ar... 34 2.4
UniRef50_Q8I1U6 Cluster: Putative uncharacterized protein PFD069... 33 3.2
UniRef50_A5K5C4 Cluster: Putative uncharacterized protein; n=1; ... 33 3.2
UniRef50_Q8A143 Cluster: Putative uncharacterized protein; n=1; ... 33 4.3
UniRef50_Q0CEJ3 Cluster: Predicted protein; n=1; Aspergillus ter... 33 4.3
UniRef50_Q9VC96 Cluster: CG31132-PA; n=5; Diptera|Rep: CG31132-P... 33 5.6
UniRef50_Q2LPR4 Cluster: Hypothetical cytosolic protein; n=1; Sy... 32 7.4
UniRef50_A0J095 Cluster: Transcriptional regulator, LysR family;... 32 7.4
UniRef50_Q5CY29 Cluster: Putative uncharacterized protein; n=2; ... 32 7.4
UniRef50_Q55AA3 Cluster: Putative uncharacterized protein; n=1; ... 32 7.4
UniRef50_A0BES4 Cluster: Chromosome undetermined scaffold_102, w... 32 7.4
UniRef50_A5UNI3 Cluster: Conserved hypothetical membrane protein... 32 7.4
UniRef50_UPI00015538F4 Cluster: PREDICTED: similar to PRAMEl7; n... 32 9.8
UniRef50_UPI0000E87F4D Cluster: hypothetical protein MB2181_0531... 32 9.8
UniRef50_A0EBI2 Cluster: Chromosome undetermined scaffold_88, wh... 32 9.8
UniRef50_A0BGQ2 Cluster: Chromosome undetermined scaffold_106, w... 32 9.8
>UniRef50_O28565 Cluster: Type I restriction-modification enzyme, R
subunit; n=1; Archaeoglobus fulgidus|Rep: Type I
restriction-modification enzyme, R subunit -
Archaeoglobus fulgidus
Length = 957
Score = 35.9 bits (79), Expect = 0.60
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = +1
Query: 244 LYEEIKSTGNWNTEECKEYIKPLDKSFEILYGF-PLDQILYINIFDKKDIF-NVCIKILH 417
LY EI++ E+ E+ + D E+ + + + L I K+D F +K +H
Sbjct: 711 LYSEIRNLYRLLLEDRIEFKEKFDLLSEVYHVYLQRENQLEAEIEQKRDQFYREALKFIH 770
Query: 418 EKITVDSLKKYPSLVEVYSSLVEKVKE 498
E I V +KK ++E+ +E+VK+
Sbjct: 771 ETIDVQRIKKDYPIIEINDEFLERVKK 797
>UniRef50_UPI00006CA6D2 Cluster: hypothetical protein
TTHERM_00682990; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00682990 - Tetrahymena
thermophila SB210
Length = 592
Score = 35.1 bits (77), Expect = 1.1
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +1
Query: 376 DKKDIFNVCIKILHEKITVDSLKKYPSLVEVYSSLVEKVKEYDVDVNPS 522
DKKD IK +++KI DS KKY ++ ++ S L + KE D++VN S
Sbjct: 158 DKKDSI---IKNVNKKIGPDSYKKYSNIDQLLSILNKTQKEKDLEVNAS 203
>UniRef50_Q6LQS6 Cluster: Putative uncharacterized protein BLL4869;
n=2; Vibrionales|Rep: Putative uncharacterized protein
BLL4869 - Photobacterium profundum (Photobacterium sp.
(strain SS9))
Length = 293
Score = 34.7 bits (76), Expect = 1.4
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +1
Query: 295 EYIKPLDKSFEILYGFPLDQILYI-NIFDKKDIFNVCIKILHEKITVD-SLKKYPSLVEV 468
EYI P+D E+L LD++ I NI D + NV I K VD L P++ E+
Sbjct: 233 EYITPIDGDGEVLL---LDELALISNISDFEKAINVIISCNEIKFPVDWHLSNCPTIEEL 289
Query: 469 YSSL 480
YS+L
Sbjct: 290 YSAL 293
>UniRef50_Q297C1 Cluster: GA16032-PA; n=1; Drosophila
pseudoobscura|Rep: GA16032-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 2293
Score = 33.9 bits (74), Expect = 2.4
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +1
Query: 388 IFNVCIKILHEKITVDSLKKYPSLVEVYSSLVEKVKEYDVDVNPST 525
+ ++C++I+ E +D Y LV+VY S E E D DV PST
Sbjct: 1308 VTDLCLRIIREADEIDVAAVYHQLVDVYHS-SESENEADSDVVPST 1352
>UniRef50_Q64AA2 Cluster: ATP-binding protein; n=1; uncultured
archaeon GZfos32E7|Rep: ATP-binding protein - uncultured
archaeon GZfos32E7
Length = 357
Score = 33.9 bits (74), Expect = 2.4
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +1
Query: 283 EECKEYIKPLDKSFEILYGFPLDQILYINIFDKKDIFNVCIKILHEKITVDSLKKY-PSL 459
E KEY K + K +I+ G P+ L+ IF++K+ + + E V+ KKY P L
Sbjct: 85 ENVKEYAKAILKDLKIIGGIPIPITLFEKIFERKERSKDVFRYI-ESFMVEISKKYIPVL 143
Query: 460 VEVYSSLVEKVKEYDV 507
+ ++ VK D+
Sbjct: 144 ILDELQVIGDVKIDDL 159
>UniRef50_Q8I1U6 Cluster: Putative uncharacterized protein PFD0690c;
n=6; Plasmodium|Rep: Putative uncharacterized protein
PFD0690c - Plasmodium falciparum (isolate 3D7)
Length = 1485
Score = 33.5 bits (73), Expect = 3.2
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 5/105 (4%)
Frame = +1
Query: 217 STILSNI-----IILYEEIKSTGNWNTEECKEYIKPLDKSFEILYGFPLDQILYINIFDK 381
STI N+ II++ E K+ NTE K +PL + EI + + + +
Sbjct: 1240 STIYDNVLSVLSIIIFNENKNFKENNTESLKHIQQPLQTNNEI----NIHNFITMFVSMN 1295
Query: 382 KDIFNVCIKILHEKITVDSLKKYPSLVEVYSSLVEKVKEYDVDVN 516
K+ F +L++K+ D L+KY S +++ K K+ D +N
Sbjct: 1296 KNYFK---DLLNQKVVQDILRKYGSFIQMCIYFDLKKKKVDSIIN 1337
>UniRef50_A5K5C4 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 2877
Score = 33.5 bits (73), Expect = 3.2
Identities = 18/76 (23%), Positives = 35/76 (46%)
Frame = +1
Query: 271 NWNTEECKEYIKPLDKSFEILYGFPLDQILYINIFDKKDIFNVCIKILHEKITVDSLKKY 450
+W+ E L K +I+ +D+ Y +D++ + + + SL Y
Sbjct: 64 SWDDRSSDESKDDLKKLIQIINHNYIDKHFYFKKLSIRDLYKIFV---YSNFLTKSLILY 120
Query: 451 PSLVEVYSSLVEKVKE 498
PSL+ + ++EKVK+
Sbjct: 121 PSLIPHFEGIIEKVKK 136
>UniRef50_Q8A143 Cluster: Putative uncharacterized protein; n=1;
Bacteroides thetaiotaomicron|Rep: Putative
uncharacterized protein - Bacteroides thetaiotaomicron
Length = 94
Score = 33.1 bits (72), Expect = 4.3
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Frame = +1
Query: 211 VSSTILSNIIILYEEIKSTGNWNTEECKEYIK-----PLDKSFEILYGFPLDQILYINIF 375
+ S +L+N + L + S + T++ KEY PL++S + Y ILY I
Sbjct: 2 LQSFVLANRLCLIQHEASIPGYRTQK-KEYQMAHEHPPLNQSIYLPYWH--FSILYTYIL 58
Query: 376 DKKDIFNVCIKILHEKITVDSL 441
+K FN CI ++ KITV SL
Sbjct: 59 QEKSHFNACIPCIY-KITVKSL 79
>UniRef50_Q0CEJ3 Cluster: Predicted protein; n=1; Aspergillus
terreus NIH2624|Rep: Predicted protein - Aspergillus
terreus (strain NIH 2624)
Length = 533
Score = 33.1 bits (72), Expect = 4.3
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +1
Query: 388 IFNVCIKILHEKITVDSLKKYPSLVEVYSSLVEKVKEYDV 507
++ C+ H++ D L PS + +SL+E +K+YDV
Sbjct: 64 LYTGCLPYFHDRCVEDFLSLVPSKQDPKASLLESIKDYDV 103
>UniRef50_Q9VC96 Cluster: CG31132-PA; n=5; Diptera|Rep: CG31132-PA -
Drosophila melanogaster (Fruit fly)
Length = 2232
Score = 32.7 bits (71), Expect = 5.6
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +1
Query: 388 IFNVCIKILHEKITVDSLKKYPSLVEVYSSLVEKVKEYDVDVNPST 525
+ ++C++I+ E +D Y L +VY S E E D DV PST
Sbjct: 1300 VTDLCLRIIREPDEIDVAAVYHQLADVYHS-SESENEVDSDVVPST 1344
>UniRef50_Q2LPR4 Cluster: Hypothetical cytosolic protein; n=1;
Syntrophus aciditrophicus SB|Rep: Hypothetical cytosolic
protein - Syntrophus aciditrophicus (strain SB)
Length = 300
Score = 32.3 bits (70), Expect = 7.4
Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Frame = +1
Query: 244 LYEEIKSTGNWNTEECKEYIKPLD--KSFEILYGFPLDQIL-YINIFDKKDIFNVCIKIL 414
L + + G WN ++ +EY + D + FE F + ++ F +D+F IL
Sbjct: 135 LSRQERDPGAWNEQKWREYCEAADGLEGFEAWGAFSDKSLASFMVTFQMEDVFT----IL 190
Query: 415 HEKITVDSLKKYPSLVEVYSSLVEKVKEYDV 507
H + L+ YP+ VY K+ + DV
Sbjct: 191 HHSSATEYLRFYPNNALVYFVTQLKLSQPDV 221
>UniRef50_A0J095 Cluster: Transcriptional regulator, LysR family;
n=1; Shewanella woodyi ATCC 51908|Rep: Transcriptional
regulator, LysR family - Shewanella woodyi ATCC 51908
Length = 308
Score = 32.3 bits (70), Expect = 7.4
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = +1
Query: 346 LDQILYINIFDKKDIFNVCIKILHEKITVDSLKKYPSLVEVY---SSLVEKVKEYDVDVN 516
LD+ LY + F +D C+ H+K + L + E Y S++ EK +EY++
Sbjct: 162 LDENLYESSFLLQDELMACLSKDHKKAERNHLVAEDFIDETYITNSTIPEKDREYELFFQ 221
Query: 517 PSTVLP 534
P VLP
Sbjct: 222 PENVLP 227
>UniRef50_Q5CY29 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium parvum Iowa II
Length = 297
Score = 32.3 bits (70), Expect = 7.4
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 4/101 (3%)
Frame = +1
Query: 211 VSSTILSNIIILYEEIKSTGNWNTEE--CKEYIKPLDKSFEILYGF--PLDQILYINIFD 378
V S ++ ++ I YE IKS G + + E+ L++ E+ Y D+I + D
Sbjct: 177 VFSPVIDDLKIKYEHIKSEGTMESFQKLINEFCSALEERNELRYRLVHGEDRIEIPDSAD 236
Query: 379 KKDIFNVCIKILHEKITVDSLKKYPSLVEVYSSLVEKVKEY 501
K ++ N + I + + +DS +++ +S+ EK K Y
Sbjct: 237 KNEL-NQDVSI-DQNVNIDSNNSQNQIIDSVNSIQEKSKRY 275
>UniRef50_Q55AA3 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 883
Score = 32.3 bits (70), Expect = 7.4
Identities = 21/79 (26%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Frame = +1
Query: 292 KEYIKPLDKSFEILYGFPLDQI-LYINIFDKKDIFNVCIKILHEKITVDSLKKY---PSL 459
+EY+ +D ++ G L +I L +N +K+ + +K++ K+ +D+ K Y L
Sbjct: 284 REYLNLMDD--QVFKGDQLCEISLLVNKLIEKNNLEI-LKLILSKLNIDNRKSYNGDSEL 340
Query: 460 VEVYSSLVEKVKEYDVDVN 516
+E++ L+E K +D+N
Sbjct: 341 IEIFGFLIESNKILKLDIN 359
>UniRef50_A0BES4 Cluster: Chromosome undetermined scaffold_102,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_102,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 330
Score = 32.3 bits (70), Expect = 7.4
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Frame = +1
Query: 340 FPLDQILYINIFDKKDIFNVCIKILHEK-ITVDSLKKYPSLVEVYSSLVEKVKEY----- 501
F L++ + NI D D++N+C + H K + V S Y + + V K K +
Sbjct: 137 FDLNKQSFDNIIDDNDLYNLCEQDPHHKNLFVRSQNNYLCIQDTREKKVNKFKAHSLQIL 196
Query: 502 DVDVNPS 522
D+D NP+
Sbjct: 197 DIDFNPN 203
>UniRef50_A5UNI3 Cluster: Conserved hypothetical membrane protein
Msm_1556; n=1; Methanobrevibacter smithii ATCC
35061|Rep: Conserved hypothetical membrane protein
Msm_1556 - Methanobrevibacter smithii (strain PS / ATCC
35061 / DSM 861)
Length = 352
Score = 32.3 bits (70), Expect = 7.4
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Frame = +1
Query: 286 ECKEYIKPLDKSFEIL----YGFPLDQILYINIFDKKDIFNV 399
+C++Y K ++ +F YG L +L+INIFDK FNV
Sbjct: 273 DCEKYSKSVNNAFVFCSIGSYGVYLANVLFINIFDKILSFNV 314
>UniRef50_UPI00015538F4 Cluster: PREDICTED: similar to PRAMEl7; n=2;
Mus musculus|Rep: PREDICTED: similar to PRAMEl7 - Mus
musculus
Length = 428
Score = 31.9 bits (69), Expect = 9.8
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +1
Query: 352 QILYINIFDKKDIFNVCIKILHEKITVDSL--KKYPSLVEVYSSL 480
Q+ IN++D NV LH ++ L +KYP+L EVY+ L
Sbjct: 138 QLTSINLYDNDISKNVLENFLHHTTSLSQLTTEKYPALSEVYNKL 182
>UniRef50_UPI0000E87F4D Cluster: hypothetical protein MB2181_05315;
n=1; Methylophilales bacterium HTCC2181|Rep:
hypothetical protein MB2181_05315 - Methylophilales
bacterium HTCC2181
Length = 808
Score = 31.9 bits (69), Expect = 9.8
Identities = 13/47 (27%), Positives = 27/47 (57%)
Frame = +1
Query: 394 NVCIKILHEKITVDSLKKYPSLVEVYSSLVEKVKEYDVDVNPSTVLP 534
N C ++ + + D ++ ++V +S + VKEYD+++ +T LP
Sbjct: 335 NKCFEVQQKDVISDLNDEFDNIVYEIASYISSVKEYDIELLLNTKLP 381
>UniRef50_A0EBI2 Cluster: Chromosome undetermined scaffold_88, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_88,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 134
Score = 31.9 bits (69), Expect = 9.8
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +1
Query: 379 KKDIFNVCIKILHEKITVDSLKKYPSLV 462
K++ NV I+IL+E I DS+ K+P+LV
Sbjct: 105 KEEYLNVLIEILNEFILADSIYKFPTLV 132
>UniRef50_A0BGQ2 Cluster: Chromosome undetermined scaffold_106,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_106,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1162
Score = 31.9 bits (69), Expect = 9.8
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Frame = +1
Query: 274 WNTEECKEYIKPLDKSFEILYGFP-LDQ--ILYINIFDKKDIFNVCIKILHEKITVDSL 441
W + + + DK F ++ G LD +++ +I + DIFN CI I H+ +D++
Sbjct: 272 WENKWESKIMNLRDKEFAVIAGSKWLDSLCVIFWSITNTSDIFNYCIHIFHQNNDLDNV 330
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.317 0.138 0.394
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 440,113,339
Number of Sequences: 1657284
Number of extensions: 7468204
Number of successful extensions: 21079
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20475
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21074
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 34989170748
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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