Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0339
         (542 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.3  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   5.3  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   5.3  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   5.3  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   5.3  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   7.0  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.2  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 8/30 (26%), Positives = 17/30 (56%)
 Frame = -1

Query: 449 YFFRLSTVIFSCRILMHTLKISFLSKIFMY 360
           Y+F    ++F C  ++ T+ + FL  I+ +
Sbjct: 259 YYFYYMHLLFCCAFIIFTMHLLFLLCIYYF 288



 Score = 20.6 bits (41), Expect = 9.2
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = -1

Query: 449 YFFRLSTVIFSCRILMHTLKISFLSKIFMY 360
           Y+F  + +IF+  +L + + I  L   + Y
Sbjct: 213 YYFYSAFIIFTIHLLFYCVLIILLCIYYFY 242


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = -1

Query: 305  FMYSLHSSVFQLPVLFISSYNIMILLNIVELTGHSL 198
            F Y++   +F + V F    NI +++  +  TG++L
Sbjct: 947  FYYNIIPILFFMLVCFTCKSNIQLIVAQILSTGYAL 982


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = -1

Query: 305  FMYSLHSSVFQLPVLFISSYNIMILLNIVELTGHSL 198
            F Y++   +F + V F    NI +++  +  TG++L
Sbjct: 947  FYYNIIPILFFMLVCFTCKSNIQLIVAQILSTGYAL 982


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = -1

Query: 305  FMYSLHSSVFQLPVLFISSYNIMILLNIVELTGHSL 198
            F Y++   +F + V F    NI +++  +  TG++L
Sbjct: 947  FYYNIIPILFFMLVCFTCKSNIQLIVAQILSTGYAL 982


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = -1

Query: 305  FMYSLHSSVFQLPVLFISSYNIMILLNIVELTGHSL 198
            F Y++   +F + V F    NI +++  +  TG++L
Sbjct: 947  FYYNIIPILFFMLVCFTCKSNIQLIVAQILSTGYAL 982


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = -3

Query: 435 VYSYFFM*NFNAYIENIFLIKNIYVQDL 352
           +Y +FF  +   Y+  ++L+KN+ +  L
Sbjct: 274 MYVFFFHLSDVRYVMVVYLLKNVVLYGL 301


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 298  YIKPLDKSFEILYGFPL 348
            ++  L KSF  +YG PL
Sbjct: 1310 HLSKLIKSFNEIYGVPL 1326


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.317    0.138    0.394 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,694
Number of Sequences: 336
Number of extensions: 2143
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13306679
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)