Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0339
         (542 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            25   2.1  
U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.         24   2.8  
AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.     24   2.8  
AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.     24   2.8  
AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.     24   2.8  
AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    23   8.6  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   8.6  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 24.6 bits (51), Expect = 2.1
 Identities = 16/57 (28%), Positives = 23/57 (40%)
 Frame = +1

Query: 274 WNTEECKEYIKPLDKSFEILYGFPLDQILYINIFDKKDIFNVCIKILHEKITVDSLK 444
           WN +E  E +       E  Y    + IL+ NI+   +   V I  LH  +   S K
Sbjct: 98  WNKKELNELLVAAKYHDEYGYALSNNTILFGNIYPSAEYIGV-ISRLHSVVEFSSAK 153


>U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.
          Length = 692

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = +1

Query: 334 YGFPLDQILYINIFDKKDIFNVCIKILH 417
           +G+P D+++  N F  K+++   + I H
Sbjct: 655 FGYPFDRVINFNYFYTKNMYFKDVFIFH 682


>AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = +1

Query: 334 YGFPLDQILYINIFDKKDIFNVCIKILH 417
           +G+P D+++  N F  K+++   + I H
Sbjct: 655 FGYPFDRVINFNYFYTKNMYFKDVFIFH 682


>AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = +1

Query: 334 YGFPLDQILYINIFDKKDIFNVCIKILH 417
           +G+P D+++  N F  K+++   + I H
Sbjct: 655 FGYPFDRVINFNYFYTKNMYFKDVFIFH 682


>AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = +1

Query: 334 YGFPLDQILYINIFDKKDIFNVCIKILH 417
           +G+P D+++  N F  K+++   + I H
Sbjct: 655 FGYPFDRVINFNYFYTKNMYFKDVFIFH 682


>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +1

Query: 40  KNTNLINQIHKCLLPKLSKGIDETENPIEYE 132
           K TN  +    C LP+     D +  PIE E
Sbjct: 439 KPTNFTSSASSCFLPEAGARWDVSGVPIEME 469


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +2

Query: 359  CT*IFLIRKIFSMYALKFYM 418
            C  +FL+  IF+++ + F+M
Sbjct: 1756 CLLLFLVMFIFAIFGMSFFM 1775


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.317    0.138    0.394 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 476,137
Number of Sequences: 2352
Number of extensions: 7813
Number of successful extensions: 29
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50040333
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)