Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0339
         (542 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z36753-13|CAA85331.1|  598|Caenorhabditis elegans Hypothetical p...    30   1.2  
U37548-2|ABK57090.1|  452|Caenorhabditis elegans Sulfatase domai...    30   1.2  
U37548-1|AAA79198.2|  488|Caenorhabditis elegans Sulfatase domai...    30   1.2  
AF100664-1|AAC68985.1|  580|Caenorhabditis elegans Hypothetical ...    29   2.9  
U39851-1|AAF99869.2|  281|Caenorhabditis elegans Hypothetical pr...    28   3.8  
Z47808-7|CAA87771.2|  934|Caenorhabditis elegans Hypothetical pr...    28   5.0  
U58760-5|AAK31464.1| 1076|Caenorhabditis elegans Hypothetical pr...    28   5.0  
U41550-5|AAA83287.4|  402|Caenorhabditis elegans Hypothetical pr...    27   6.6  
U29097-1|AAA68411.1| 1490|Caenorhabditis elegans Hypothetical pr...    27   6.6  
U41021-7|AAL02487.1|  680|Caenorhabditis elegans Hypothetical pr...    27   8.7  
U41021-6|AAL02488.1|  713|Caenorhabditis elegans Hypothetical pr...    27   8.7  

>Z36753-13|CAA85331.1|  598|Caenorhabditis elegans Hypothetical
           protein T09A5.2a protein.
          Length = 598

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +1

Query: 376 DKKDIFNVCIKILHEKITVDSLKKYPSLVEVYSSLVEKVKE 498
           D KD FNVC+  +   +T  +   +  L+E Y + +EK K+
Sbjct: 194 DTKDAFNVCMAEMRMMLTSKTTDFFRVLIERYKAEMEKRKQ 234


>U37548-2|ABK57090.1|  452|Caenorhabditis elegans Sulfatase domain
           protein protein3, isoform b protein.
          Length = 452

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +1

Query: 268 GNWNTEECKEYIKPLDKSFEILYGFPLDQILYIN 369
           G W+   CK+   P ++ F+  YGF   Q  Y N
Sbjct: 96  GKWHLGYCKKEFLPTNRGFDYFYGFYGPQTGYFN 129


>U37548-1|AAA79198.2|  488|Caenorhabditis elegans Sulfatase domain
           protein protein3, isoform a protein.
          Length = 488

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +1

Query: 268 GNWNTEECKEYIKPLDKSFEILYGFPLDQILYIN 369
           G W+   CK+   P ++ F+  YGF   Q  Y N
Sbjct: 132 GKWHLGYCKKEFLPTNRGFDYFYGFYGPQTGYFN 165


>AF100664-1|AAC68985.1|  580|Caenorhabditis elegans Hypothetical
           protein M57.2 protein.
          Length = 580

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = +1

Query: 7   ESARGFLVNMDKNTNLINQIHKCLLPKLSKGIDETENPIE 126
           E   GF+ + D + N + +I + +LP L K +   ENPIE
Sbjct: 474 EYLAGFVGSADFSGNRLKEIQRIVLPNL-KSLTINENPIE 512


>U39851-1|AAF99869.2|  281|Caenorhabditis elegans Hypothetical
           protein C23G10.5 protein.
          Length = 281

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
 Frame = +1

Query: 271 NWNTEECKEYIKPLDKSFEILYGFPLDQILYINIFDKKDIFNV-C--IKILHEKITVDSL 441
           N N  +  + + P   SFE    F LD +   + F + ++FN  C  I++   +I+ +++
Sbjct: 124 NLNVTKSMDLMIPTHSSFEFSQDFHLDAVRLRSCFGRNNLFNFHCKEIEVSDSEISSENV 183

Query: 442 KKY 450
            +Y
Sbjct: 184 NQY 186


>Z47808-7|CAA87771.2|  934|Caenorhabditis elegans Hypothetical
           protein D2013.5 protein.
          Length = 934

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +1

Query: 454 SLVEVYSSLVEKVKEYDVDVNPSTVLP 534
           SL+++YS +++ + EYD   N S  LP
Sbjct: 262 SLIDMYSEVLDLLNEYDSSYNTSDNLP 288


>U58760-5|AAK31464.1| 1076|Caenorhabditis elegans Hypothetical
           protein C27A2.1 protein.
          Length = 1076

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 13/34 (38%), Positives = 22/34 (64%)
 Frame = +1

Query: 427 TVDSLKKYPSLVEVYSSLVEKVKEYDVDVNPSTV 528
           T+D  K  P+  ++YSSLV+  +E DV  + +T+
Sbjct: 802 TLDESKMSPAENKIYSSLVKMFEEADVPTDMNTL 835


>U41550-5|AAA83287.4|  402|Caenorhabditis elegans Hypothetical
           protein R04A9.7 protein.
          Length = 402

 Score = 27.5 bits (58), Expect = 6.6
 Identities = 20/72 (27%), Positives = 32/72 (44%)
 Frame = -1

Query: 413 RILMHTLKISFLSKIFMYKI*SNGKPYKISKDLSKGFMYSLHSSVFQLPVLFISSYNIMI 234
           R ++ T+   FL  +  Y   +N K Y + + L  G +Y+L       P  +   Y   I
Sbjct: 102 RKILETINSPFLCDLH-YAFQTNEKLYLVLEFLHGGELYTLLERKSDWPEEYARFYLSEI 160

Query: 233 LLNIVELTGHSL 198
           +L I  L GH +
Sbjct: 161 ILAIEHLHGHDI 172


>U29097-1|AAA68411.1| 1490|Caenorhabditis elegans Hypothetical
           protein F18C5.3 protein.
          Length = 1490

 Score = 27.5 bits (58), Expect = 6.6
 Identities = 10/37 (27%), Positives = 22/37 (59%)
 Frame = +1

Query: 28  VNMDKNTNLINQIHKCLLPKLSKGIDETENPIEYEIR 138
           V+ ++   ++ +I++ +LP+LSK +D     +E   R
Sbjct: 557 VSKNEKHTILQRINRVILPRLSKSLDSQAQAVERNAR 593


>U41021-7|AAL02487.1|  680|Caenorhabditis elegans Hypothetical
           protein F14D12.1a protein.
          Length = 680

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
 Frame = +1

Query: 313 DKSFEILYGFPLDQILYINIFDKK---DIFNVCIKILHEKITVDSLKKYPSLVEVYSSLV 483
           D    I++G+P + +LY  +       D  N  + I     + + L   PS +E++S L+
Sbjct: 29  DSRLAIVHGYPAETLLYCEVAGASITTDHMNHRVTITPNDGSSEFLFCCPS-IEMFSRLL 87

Query: 484 EKVKEYDVDVN 516
           +K  E D  +N
Sbjct: 88  KKANEDDGSLN 98


>U41021-6|AAL02488.1|  713|Caenorhabditis elegans Hypothetical
           protein F14D12.1b protein.
          Length = 713

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
 Frame = +1

Query: 313 DKSFEILYGFPLDQILYINIFDKK---DIFNVCIKILHEKITVDSLKKYPSLVEVYSSLV 483
           D    I++G+P + +LY  +       D  N  + I     + + L   PS +E++S L+
Sbjct: 29  DSRLAIVHGYPAETLLYCEVAGASITTDHMNHRVTITPNDGSSEFLFCCPS-IEMFSRLL 87

Query: 484 EKVKEYDVDVN 516
           +K  E D  +N
Sbjct: 88  KKANEDDGSLN 98


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.317    0.138    0.394 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,562,515
Number of Sequences: 27780
Number of extensions: 192909
Number of successful extensions: 543
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 526
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 543
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1091917214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)