Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0335
(467 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0653 + 25911162-25911272,25911648-25911694,25912877-259133... 32 0.20
04_04_0981 + 29912275-29912814 31 0.61
08_02_0210 + 14324539-14324609,14324735-14325740,14325838-143273... 30 0.81
11_01_0040 - 304439-304482,304589-304652,304766-304831,305509-30... 29 2.5
01_04_0143 + 16689471-16689498,16689687-16689818,16689974-166900... 28 3.3
12_02_0626 - 21344530-21344986,21346132-21346469,21347300-213473... 28 4.3
11_06_0656 + 25926192-25926289,25927530-25927659,25928248-259282... 28 4.3
05_04_0069 - 17639386-17641380 28 4.3
02_04_0157 + 20388761-20388763,20389807-20389935,20390206-203903... 28 4.3
12_02_0975 + 24991666-24991956,24994303-24994485 27 5.7
12_02_0618 - 21262021-21262117,21262429-21262466,21262933-212629... 27 5.7
05_07_0196 + 28352320-28352522,28352679-28352808,28353774-283538... 27 5.7
04_04_1250 + 32077590-32078000,32078132-32078308,32078437-320785... 27 5.7
07_01_0718 + 5484553-5484601,5484836-5484933,5485028-5485078,548... 27 7.5
04_02_0017 - 8572400-8572732,8572818-8572919,8573138-8573230,857... 27 7.5
03_05_1097 + 30393336-30393578,30393661-30393780,30393859-303940... 27 7.5
03_02_0235 + 6644083-6644125,6645218-6645315,6645448-6645498,664... 27 7.5
02_04_0405 + 22637025-22637130,22637246-22637403,22637934-226380... 27 7.5
01_06_1580 - 38406740-38407257,38407481-38407552,38408309-384083... 27 7.5
01_05_0740 - 24809951-24810394,24810622-24810700,24811651-248118... 27 7.5
12_01_0039 - 319871-319914,320021-320084,320198-320263,320397-32... 27 10.0
08_01_0022 - 163512-163817,165963-166032,166074-166151,166399-16... 27 10.0
07_03_0524 - 19037638-19038294 27 10.0
07_03_0512 - 18954515-18955972 27 10.0
>11_06_0653 +
25911162-25911272,25911648-25911694,25912877-25913355,
25914089-25914249,25914324-25914519,25914745-25914807,
25914898-25915047,25915148-25915494
Length = 517
Score = 32.3 bits (70), Expect = 0.20
Identities = 22/100 (22%), Positives = 41/100 (41%), Gaps = 7/100 (7%)
Frame = +1
Query: 181 LALGVLAEEDSCYQNVDQGCRRTLSLPHCSAYYGQFKDNHVVANELKALASLYLKRSYHY 360
L LGV+A ++ Q + +G + ++ Y + N + + L + + H
Sbjct: 181 LKLGVMAADERISQRIQEGITESFAVKDVRGYSTKKNLNPSPCDPVYKLNKIAMNGDRHK 240
Query: 361 LLSAS-------YFNNYQTNREGFAKLFRKLSDDSWEKTI 459
LL + + + Y + E K+ K+SD WE I
Sbjct: 241 LLEKNGIKTVGDFLSFYDRSPEDLRKILGKISDQDWETII 280
>04_04_0981 + 29912275-29912814
Length = 179
Score = 30.7 bits (66), Expect = 0.61
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 4/91 (4%)
Frame = +3
Query: 96 SNALVIFSRIRH*INRIKYDGVCSHRCLSGSGCAGRGRLMLSERRPRMQ----TDFKSAA 263
S + + R+ I R + G+ S +G G GRG +++ + RP+ + F+ A
Sbjct: 59 SGSAAVVGRVYSLIERERRMGLRSRSVAAGGGGGGRG-IVVRDERPKSRAFGWVSFRKAT 117
Query: 264 LQRVLRPIQGQPRCSERTEGISLTVFETFLP 356
RV+ G R+ +S T ET P
Sbjct: 118 SDRVVEVDDG--AALARSSSVSATAVETRAP 146
>08_02_0210 +
14324539-14324609,14324735-14325740,14325838-14327390,
14327473-14327601,14328345-14328510
Length = 974
Score = 30.3 bits (65), Expect = 0.81
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +3
Query: 123 IRH*INRIKYDGVCSHRCLSGSGCAGRGRLMLSERRPRM 239
IRH +N K+ C +SG C L++S R PRM
Sbjct: 739 IRHRVNLAKHTCTCREWQVSGKPCPHALALIISTRNPRM 777
>11_01_0040 -
304439-304482,304589-304652,304766-304831,305509-305640,
305744-305804,305885-306018,306310-306654
Length = 281
Score = 28.7 bits (61), Expect = 2.5
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +1
Query: 325 LASLYLKRSYHYLLSASYFNNYQTNREGFAKLFRKLSDD 441
L S+ SY Y +YF+ +GFAK F++ SD+
Sbjct: 130 LCSVEYNASYAYHSLFAYFDRDNVALKGFAKFFKESSDE 168
>01_04_0143 +
16689471-16689498,16689687-16689818,16689974-16690013,
16690214-16690280,16690349-16690431,16690755-16690821,
16692741-16692821,16693696-16693791,16694172-16694198
Length = 206
Score = 28.3 bits (60), Expect = 3.3
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +2
Query: 107 CYFFENSPLNKSHQI*RCMLS-SLPVWLWVC 196
CY E + L++ HQI C ++ S V +W C
Sbjct: 71 CYHLEEADLHQCHQILTCTINGSSLVMIWCC 101
>12_02_0626 -
21344530-21344986,21346132-21346469,21347300-21347338,
21347572-21347629,21349854-21350136,21350404-21350766,
21350768-21350840
Length = 536
Score = 27.9 bits (59), Expect = 4.3
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +3
Query: 171 RCLSGSGCAGRGRLMLSERRPRMQTDFKSAALQRVLRPIQGQPRCSERTEG 323
+ ++G G +GRG ++ + PR + +A +R L +G +C + G
Sbjct: 87 KAVTGGGRSGRGLVVCCQMAPRRGGGERRSAQRRRLERRKGGDQCDDELSG 137
>11_06_0656 +
25926192-25926289,25927530-25927659,25928248-25928294,
25929274-25929388,25929504-25929753,25930079-25930239,
25930372-25930567,25930672-25930836,25930918-25931070,
25931160-25931248,25931385-25931423,25931460-25931681,
25933503-25934165
Length = 775
Score = 27.9 bits (59), Expect = 4.3
Identities = 18/98 (18%), Positives = 40/98 (40%), Gaps = 7/98 (7%)
Frame = +1
Query: 187 LGVLAEEDSCYQNVDQGCRRTLSLPHCSAYYGQFKDNHVVANELKALASLYLKRSYHYLL 366
LGV+A ++ + + +G + ++ Y + N + + L+ + H LL
Sbjct: 184 LGVMAADERISERIQEGITESFAVKDVRGYLTKKNPNPSPRDAVYKLSKIAKNGDRHKLL 243
Query: 367 SAS-------YFNNYQTNREGFAKLFRKLSDDSWEKTI 459
+ + + Y + + K+ K+SD W+ I
Sbjct: 244 EQNGIKTVEDFLSFYNKSPDDLRKILGKISDQDWDLII 281
>05_04_0069 - 17639386-17641380
Length = 664
Score = 27.9 bits (59), Expect = 4.3
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +1
Query: 31 DESLLEVAFCASVCKGSTFDIRQTHLL-FFREFATK*IASNMTVYALIVAC 180
+ S ++VA C ++ G + + + + L FREF + I N+ + IVAC
Sbjct: 216 ESSHMDVASCNALVAGLSRNAQVSEALRLFREFVGRGIELNVVSWTSIVAC 266
>02_04_0157 + 20388761-20388763,20389807-20389935,20390206-20390349,
20390690-20390835,20390915-20391071,20391312-20391370,
20391466-20391664,20392232-20392381,20392471-20392607,
20392717-20392863,20392975-20393076,20395655-20395712,
20395816-20395917,20396236-20396273,20396409-20396535,
20397092-20397259,20397356-20397487,20400222-20400331,
20400400-20400460,20400929-20401106,20401194-20401399,
20401552-20401671,20402523-20402621,20404177-20404386,
20404704-20404843,20404945-20405053,20405351-20405431,
20405523-20405693,20405825-20405974,20407029-20407202,
20407453-20407479,20407688-20407758,20407843-20407942,
20408305-20408361,20409457-20409513,20409656-20409736,
20410336-20410421,20410535-20410649
Length = 1466
Score = 27.9 bits (59), Expect = 4.3
Identities = 21/73 (28%), Positives = 33/73 (45%)
Frame = +3
Query: 78 QYFRHTSNALVIFSRIRH*INRIKYDGVCSHRCLSGSGCAGRGRLMLSERRPRMQTDFKS 257
QY + T A++I S R + +Y G+ + + CA RGRL E R ++
Sbjct: 839 QYRQQTKAAVIIQSYCRSYLAHSQYMGL--KKAAITTQCAWRGRLARRELRKLKMAAKET 896
Query: 258 AALQRVLRPIQGQ 296
ALQ ++ Q
Sbjct: 897 GALQAAKNKLEKQ 909
>12_02_0975 + 24991666-24991956,24994303-24994485
Length = 157
Score = 27.5 bits (58), Expect = 5.7
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +1
Query: 118 REFATK*IASNMTVYALIVACLALGVLAEEDSCYQ 222
R+F + + +T+Y L V ALG+ D C Q
Sbjct: 79 RDFMAREVTDTVTLYDLFVGATALGIDGLSDLCAQ 113
>12_02_0618 -
21262021-21262117,21262429-21262466,21262933-21262986,
21263274-21263438,21263523-21263759,21263857-21263918,
21264543-21264656,21264816-21264942,21266200-21266218,
21266338-21266428,21266932-21267094,21267182-21267330,
21268147-21268287,21268368-21268533,21268568-21268631,
21268729-21269084,21269759-21269977,21270328-21270433,
21270713-21270942
Length = 865
Score = 27.5 bits (58), Expect = 5.7
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = -1
Query: 194 TPRARQATMRAYTVIFDAIYLVANSR 117
TP ++QA +++Y V+FDA+Y +R
Sbjct: 473 TPLSKQA-LKSYAVVFDAVYTPKETR 497
>05_07_0196 +
28352320-28352522,28352679-28352808,28353774-28353851,
28355562-28355664,28356109-28356302,28356501-28356518
Length = 241
Score = 27.5 bits (58), Expect = 5.7
Identities = 11/39 (28%), Positives = 25/39 (64%), Gaps = 4/39 (10%)
Frame = +3
Query: 342 ETFLPLSPVGLLLQQLPDEQGRI----REALQEIIGRFV 446
+ FLP++ +G ++++ E G+I +E++QE + F+
Sbjct: 24 DRFLPIANIGRIMRRAVPENGKIAKDSKESVQECVSEFI 62
>04_04_1250 +
32077590-32078000,32078132-32078308,32078437-32078561,
32078629-32078761,32078866-32079015,32079105-32079158,
32079437-32079532,32080021-32080095,32080723-32080824,
32080903-32081589,32081686-32081817,32081916-32082023,
32082170-32082319
Length = 799
Score = 27.5 bits (58), Expect = 5.7
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Frame = +3
Query: 252 KSAALQRVLRPIQGQPRCSERTEGISLTVFETFL--PLSPVGLLLQQLP--DEQGRIREA 419
K A LQRV+R ++ Q R S G + T+L P L +L +E+ +R
Sbjct: 295 KKAKLQRVIRSMKRQQRKSTEDTGSNYYSPLTYLKDPQGFAEKLFSRLQKCNERFEVRMM 354
Query: 420 LQEIIGRFVGENH 458
+ ++I R +G +H
Sbjct: 355 MLKVIARTIGLHH 367
>07_01_0718 +
5484553-5484601,5484836-5484933,5485028-5485078,
5485744-5485857,5485887-5485937,5485938-5486138,
5486240-5486341,5486879-5486986,5487053-5487286,
5488250-5488500,5488592-5488763,5489165-5489320,
5489405-5489455,5489499-5489591,5489814-5490014,
5490105-5490236,5490308-5490481,5490755-5490994,
5491213-5491407
Length = 890
Score = 27.1 bits (57), Expect = 7.5
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -3
Query: 306 YNVVVLELAVIRAAVRQT*SPSASLVDVLIA*VFLGQHTQSQTGNDE 166
YN V+LE A +RA+ T + +LVD L +F+ G+DE
Sbjct: 500 YNRVILENATVRASAVSTLAKFGALVDSLKPRIFVLLRRCLFDGDDE 546
>04_02_0017 -
8572400-8572732,8572818-8572919,8573138-8573230,
8573391-8573519,8573781-8574025,8574184-8574453,
8574590-8574752,8575965-8576063
Length = 477
Score = 27.1 bits (57), Expect = 7.5
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +3
Query: 153 DGVCSHRCLSGSGCAGRGRLMLSERRPRMQTDFKSAALQRVLRPIQGQ 296
DG+ + C G L E P ++ + K AALQR+ R +G+
Sbjct: 155 DGIAQTHGDNLMACEDDGTAQLEEEEPWIRGNNKGAALQRLSRSRRGK 202
>03_05_1097 +
30393336-30393578,30393661-30393780,30393859-30394017,
30394184-30394225,30394336-30394508,30394600-30394705,
30394795-30394824
Length = 290
Score = 27.1 bits (57), Expect = 7.5
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 5/56 (8%)
Frame = +1
Query: 211 SCYQNVDQGCRRTLSLPH-----CSAYYGQFKDNHVVANELKALASLYLKRSYHYL 363
S YQ V + + +PH CSA+Y + +HV + + R+ HYL
Sbjct: 14 SAYQEVKSSPKHAI-VPHNNLLGCSAFYNPVEGHHVQKPHIVPSCKVNFTRASHYL 68
>03_02_0235 +
6644083-6644125,6645218-6645315,6645448-6645498,
6645573-6645686,6645771-6645971,6646047-6646148,
6647245-6647352,6647745-6647995,6648108-6648279,
6648341-6648397,6648555-6648710,6648807-6648857,
6649053-6649193,6649270-6649464,6649534-6649665,
6649768-6649941,6650396-6650635,6650761-6650955
Length = 826
Score = 27.1 bits (57), Expect = 7.5
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -3
Query: 306 YNVVVLELAVIRAAVRQT*SPSASLVDVLIA*VFL 202
YN V+LE A +RA+ T + +LVD L +F+
Sbjct: 422 YNRVILENATVRASAVSTLAKFGALVDALKPRIFV 456
>02_04_0405 +
22637025-22637130,22637246-22637403,22637934-22638099,
22638200-22638517,22638906-22639117
Length = 319
Score = 27.1 bits (57), Expect = 7.5
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = +1
Query: 187 LGVLAEEDSCYQNVDQGCRRTLSLPHCSAYYGQFKDNHVVANELKALASLYLK 345
LG E +CY V + + T C+ YG D + +L+ A LY K
Sbjct: 256 LGKYREAMNCYYKVLELSKETGEDSGCTEAYGAIADCYTELGDLERAAKLYDK 308
>01_06_1580 -
38406740-38407257,38407481-38407552,38408309-38408365,
38408476-38408532,38408643-38408699,38408809-38408865,
38409371-38409424,38409744-38409800,38410023-38410076,
38412208-38412220,38413530-38413580,38414134-38414193,
38414640-38414761,38415033-38415894,38416468-38416667,
38417159-38417238,38417525-38417619
Length = 821
Score = 27.1 bits (57), Expect = 7.5
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = -2
Query: 283 GRNTRCSAADLKSVCILGRRSDSMSLPRPAHPEPDR 176
G NT D KSV ++ SD P P EP+R
Sbjct: 662 GGNTSRRLNDRKSVIVIDSDSDEDEDPHPEQHEPER 697
>01_05_0740 -
24809951-24810394,24810622-24810700,24811651-24811809,
24812083-24812246,24812436-24812624,24813151-24813408,
24813463-24813951,24814062-24814262,24814368-24814639,
24814661-24814685,24814776-24814937,24815065-24815104,
24815244-24815353,24815812-24815898,24816013-24816507
Length = 1057
Score = 27.1 bits (57), Expect = 7.5
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = +3
Query: 336 VFETFLPLSPVGLLLQQLPDEQGRIREALQEIIGRFVGENH 458
+ E L L VG LLQQ P E E I+ V E H
Sbjct: 352 LMEEALVLQAVGSLLQQYPSENSTQLELKVRILAENVTEKH 392
>12_01_0039 -
319871-319914,320021-320084,320198-320263,320397-320458,
321211-321298,321401-321461,321542-321625,322332-322630
Length = 255
Score = 26.6 bits (56), Expect = 10.0
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 349 SYHYLLSASYFNNYQTNREGFAKLFRKLSDD 441
SY Y +YF+ +GFAK F++ SD+
Sbjct: 106 SYAYHSLFAYFDRDNVALKGFAKFFKESSDE 136
>08_01_0022 -
163512-163817,165963-166032,166074-166151,166399-166439,
166830-166880,166997-167065,167924-168019,169217-169328,
169629-169774,169965-170015,170171-170281,170378-170447,
172496-172935
Length = 546
Score = 26.6 bits (56), Expect = 10.0
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = -2
Query: 220 DSMSLPRPAHPEPDRQR*EHTPSYLMRFI*WRILE 116
+S S PRP HPE D E P + R + RILE
Sbjct: 10 ESSSPPRP-HPEADMVNKEKDPEEMKRKLKERILE 43
>07_03_0524 - 19037638-19038294
Length = 218
Score = 26.6 bits (56), Expect = 10.0
Identities = 15/52 (28%), Positives = 20/52 (38%)
Frame = -2
Query: 325 MPSVRSLQRGCP*IGRNTRCSAADLKSVCILGRRSDSMSLPRPAHPEPDRQR 170
MPS+ G + R + GR + S P P HP PD +R
Sbjct: 1 MPSMMVRSAGIKRLRREMESRRRRSPELAPTGRVAKRSSTPPPLHPSPDDER 52
>07_03_0512 - 18954515-18955972
Length = 485
Score = 26.6 bits (56), Expect = 10.0
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -2
Query: 319 SVRSLQRGCP*IGRNTRCSAADLKSVC 239
+VRSL +GR R AA++K+VC
Sbjct: 428 AVRSLMDDASEVGRKVREKAAEMKAVC 454
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,195,225
Number of Sequences: 37544
Number of extensions: 245784
Number of successful extensions: 747
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 747
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 943260316
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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