Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0333
(536 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L22959-1|AAA28870.1| 152|Drosophila melanogaster ribosomal prot... 257 8e-69
BT024929-1|ABE01159.1| 152|Drosophila melanogaster IP16603p pro... 257 8e-69
AE013599-2985|AAM68401.1| 152|Drosophila melanogaster CG8900-PB... 257 8e-69
AE013599-2984|AAF57491.1| 152|Drosophila melanogaster CG8900-PA... 257 8e-69
AY118434-1|AAM48463.1| 152|Drosophila melanogaster RH43343p pro... 254 7e-68
BT022499-1|AAY54915.1| 246|Drosophila melanogaster IP07925p pro... 89 3e-18
BT016037-1|AAV36922.1| 447|Drosophila melanogaster LP23579p pro... 28 9.3
AY069030-1|AAL39175.1| 433|Drosophila melanogaster GH01429p pro... 28 9.3
AE014298-2418|AAF48619.1| 454|Drosophila melanogaster CG9903-PA... 28 9.3
AE014297-2410|AAF55469.1| 433|Drosophila melanogaster CG7379-PA... 28 9.3
>L22959-1|AAA28870.1| 152|Drosophila melanogaster ribosomal protein
S18 protein.
Length = 152
Score = 257 bits (629), Expect = 8e-69
Identities = 117/135 (86%), Positives = 129/135 (95%)
Frame = +1
Query: 28 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGLRYSNIVLKKADIDLDKRAGECT 207
MSLVIP+KFQHILRIMNTNIDGKRKV AMTAIKGVG RYSNIVLKKAD+DL KRAGECT
Sbjct: 1 MSLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60
Query: 208 EEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAH 387
EEEV+K++TI+SNP QYK+P+WFLNRQKDI+DGKY QLTSSNLDSKLR+DLERLKKIR+H
Sbjct: 61 EEEVDKVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSH 120
Query: 388 RGMRHYWGLRVRGQH 432
RG+RHYWGLRVRGQH
Sbjct: 121 RGLRHYWGLRVRGQH 135
>BT024929-1|ABE01159.1| 152|Drosophila melanogaster IP16603p
protein.
Length = 152
Score = 257 bits (629), Expect = 8e-69
Identities = 117/135 (86%), Positives = 129/135 (95%)
Frame = +1
Query: 28 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGLRYSNIVLKKADIDLDKRAGECT 207
MSLVIP+KFQHILRIMNTNIDGKRKV AMTAIKGVG RYSNIVLKKAD+DL KRAGECT
Sbjct: 1 MSLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60
Query: 208 EEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAH 387
EEEV+K++TI+SNP QYK+P+WFLNRQKDI+DGKY QLTSSNLDSKLR+DLERLKKIR+H
Sbjct: 61 EEEVDKVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSH 120
Query: 388 RGMRHYWGLRVRGQH 432
RG+RHYWGLRVRGQH
Sbjct: 121 RGLRHYWGLRVRGQH 135
>AE013599-2985|AAM68401.1| 152|Drosophila melanogaster CG8900-PB,
isoform B protein.
Length = 152
Score = 257 bits (629), Expect = 8e-69
Identities = 117/135 (86%), Positives = 129/135 (95%)
Frame = +1
Query: 28 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGLRYSNIVLKKADIDLDKRAGECT 207
MSLVIP+KFQHILRIMNTNIDGKRKV AMTAIKGVG RYSNIVLKKAD+DL KRAGECT
Sbjct: 1 MSLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60
Query: 208 EEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAH 387
EEEV+K++TI+SNP QYK+P+WFLNRQKDI+DGKY QLTSSNLDSKLR+DLERLKKIR+H
Sbjct: 61 EEEVDKVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSH 120
Query: 388 RGMRHYWGLRVRGQH 432
RG+RHYWGLRVRGQH
Sbjct: 121 RGLRHYWGLRVRGQH 135
>AE013599-2984|AAF57491.1| 152|Drosophila melanogaster CG8900-PA,
isoform A protein.
Length = 152
Score = 257 bits (629), Expect = 8e-69
Identities = 117/135 (86%), Positives = 129/135 (95%)
Frame = +1
Query: 28 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGLRYSNIVLKKADIDLDKRAGECT 207
MSLVIP+KFQHILRIMNTNIDGKRKV AMTAIKGVG RYSNIVLKKAD+DL KRAGECT
Sbjct: 1 MSLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60
Query: 208 EEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAH 387
EEEV+K++TI+SNP QYK+P+WFLNRQKDI+DGKY QLTSSNLDSKLR+DLERLKKIR+H
Sbjct: 61 EEEVDKVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSH 120
Query: 388 RGMRHYWGLRVRGQH 432
RG+RHYWGLRVRGQH
Sbjct: 121 RGLRHYWGLRVRGQH 135
>AY118434-1|AAM48463.1| 152|Drosophila melanogaster RH43343p
protein.
Length = 152
Score = 254 bits (621), Expect = 7e-68
Identities = 116/135 (85%), Positives = 128/135 (94%)
Frame = +1
Query: 28 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGLRYSNIVLKKADIDLDKRAGECT 207
MSLVIP+KFQ ILRIMNTNIDGKRKV AMTAIKGVG RYSNIVLKKAD+DL KRAGECT
Sbjct: 1 MSLVIPEKFQRILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60
Query: 208 EEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAH 387
EEEV+K++TI+SNP QYK+P+WFLNRQKDI+DGKY QLTSSNLDSKLR+DLERLKKIR+H
Sbjct: 61 EEEVDKVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSH 120
Query: 388 RGMRHYWGLRVRGQH 432
RG+RHYWGLRVRGQH
Sbjct: 121 RGLRHYWGLRVRGQH 135
>BT022499-1|AAY54915.1| 246|Drosophila melanogaster IP07925p
protein.
Length = 246
Score = 89.4 bits (212), Expect = 3e-18
Identities = 39/48 (81%), Positives = 45/48 (93%)
Frame = +1
Query: 124 IKGVGLRYSNIVLKKADIDLDKRAGECTEEEVEKIITIMSNPRQYKIP 267
IKGVG RYSNIVLKKAD+DL KRAGECTEEEV+K++TI+SNP QYK+P
Sbjct: 1 IKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTIISNPLQYKVP 48
>BT016037-1|AAV36922.1| 447|Drosophila melanogaster LP23579p
protein.
Length = 447
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -3
Query: 318 LAVFTINNILLPI*EPVWYLILPRIRHDSD 229
+A TIN++L P+W L+L RI ++ D
Sbjct: 237 VATTTINSLLALALLPIWILVLGRILYEDD 266
>AY069030-1|AAL39175.1| 433|Drosophila melanogaster GH01429p
protein.
Length = 433
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +1
Query: 277 LNRQKDIVDGKYSQLTSSNLDSKLREDLER 366
+N ++I+DGK QL + + L+ED +R
Sbjct: 97 VNHMQEIIDGKLRQLDTDQQNLDLKEDRDR 126
>AE014298-2418|AAF48619.1| 454|Drosophila melanogaster CG9903-PA
protein.
Length = 454
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -3
Query: 318 LAVFTINNILLPI*EPVWYLILPRIRHDSD 229
+A TIN++L P+W L+L RI ++ D
Sbjct: 244 VATTTINSLLALALLPIWILVLGRILYEDD 273
>AE014297-2410|AAF55469.1| 433|Drosophila melanogaster CG7379-PA
protein.
Length = 433
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +1
Query: 277 LNRQKDIVDGKYSQLTSSNLDSKLREDLER 366
+N ++I+DGK QL + + L+ED +R
Sbjct: 97 VNHMQEIIDGKLRQLDTDQQNLDLKEDRDR 126
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,643,336
Number of Sequences: 53049
Number of extensions: 452288
Number of successful extensions: 1350
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1311
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1350
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2032955904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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