Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0331
         (701 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5N1P5 Cluster: Putative uncharacterized protein; n=1; ...    34   3.9  
UniRef50_UPI0000E87C89 Cluster: phosphate regulon sensor protein...    33   5.1  

>UniRef50_A5N1P5 Cluster: Putative uncharacterized protein; n=1;
           Clostridium kluyveri DSM 555|Rep: Putative
           uncharacterized protein - Clostridium kluyveri DSM 555
          Length = 467

 Score = 33.9 bits (74), Expect = 3.9
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = -3

Query: 648 FVIVRTQLSLCLVDDLNNFRYIRLKLSFQSRRVYMKYMVLNK 523
           FVI    +SLCL    N F+Y   K+    + +Y+ Y  LNK
Sbjct: 225 FVIALILISLCLSIIYNFFKYYNFKMWADEKNIYINYGALNK 266


>UniRef50_UPI0000E87C89 Cluster: phosphate regulon sensor protein
           PhoR; n=1; Methylophilales bacterium HTCC2181|Rep:
           phosphate regulon sensor protein PhoR - Methylophilales
           bacterium HTCC2181
          Length = 434

 Score = 33.5 bits (73), Expect = 5.1
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = -1

Query: 494 SIFLLMLTLICCVSVLHV*MNFI*YWSEPIELWLEDPTITGISGYYSLW 348
           S+F L  +L+   S L + + F  YW   +  WL +P I  +   Y LW
Sbjct: 24  SVFDLETSLLFLASTLVLFLAFHIYWVYRLNQWLNNPMINNLPNGYGLW 72


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 583,470,290
Number of Sequences: 1657284
Number of extensions: 10198821
Number of successful extensions: 19073
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 18624
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19070
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55785129165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)