Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0331
         (701 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    25   0.45 
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    23   2.4  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   4.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   4.2  
AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    21   9.7  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    21   9.7  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    21   9.7  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 25.4 bits (53), Expect = 0.45
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +2

Query: 176 FYSYPTVQNGEKIFTTGIGHG 238
           FY  P V+N E +FT+GI  G
Sbjct: 115 FYIPPEVENVEDLFTSGITTG 135


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = -2

Query: 220 REYFFPVLNSRIGIE*DPSRIGGQS-RDRN 134
           +E +FP L+S +     PSR+  Q  RD N
Sbjct: 266 KEAYFPKLDSLVSSRAWPSRVANQKLRDLN 295


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +1

Query: 250 STHSMSNFKH 279
           STHSM NFK+
Sbjct: 13  STHSMKNFKY 22


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/37 (27%), Positives = 17/37 (45%)
 Frame = -3

Query: 372 YFRLLFIMGYISASLVNSTKFL*VDPNIFLIMFEVGH 262
           + + +F+MGY     V   + L     +FL +F   H
Sbjct: 781 FVKCVFLMGYQIFDWVQKEQSLAHSVGVFLTIFNAAH 817


>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +1

Query: 235 WSPVCSTHSMSNF 273
           W P+C++ + SNF
Sbjct: 160 WIPLCNSVTFSNF 172


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +1

Query: 235 WSPVCSTHSMSNF 273
           W P+C++ + SNF
Sbjct: 393 WIPLCNSVTFSNF 405


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +1

Query: 235 WSPVCSTHSMSNF 273
           W P+C++ + SNF
Sbjct: 393 WIPLCNSVTFSNF 405


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,967
Number of Sequences: 336
Number of extensions: 2823
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)