Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0329
(684 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U21322-8|AAA62544.1| 662|Caenorhabditis elegans Abnormal embroy... 81 7e-16
Z35595-6|CAA84637.1| 682|Caenorhabditis elegans Hypothetical pr... 76 2e-14
AY079165-1|AAL86012.1| 585|Caenorhabditis elegans NADPH-depende... 39 0.004
AL132858-12|CAB60480.1| 585|Caenorhabditis elegans Hypothetical... 39 0.004
Z35663-2|CAA84735.2| 335|Caenorhabditis elegans Hypothetical pr... 30 1.3
AC006712-1|AAK39323.1| 288|Caenorhabditis elegans Hypothetical ... 30 1.8
U28409-2|AAN60501.1| 288|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z93384-3|CAB07634.3| 1341|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z93384-2|CAE54901.1| 1320|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z83217-7|CAL69737.1| 223|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z81484-3|CAB03971.1| 346|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z22179-10|CAD91636.1| 136|Caenorhabditis elegans Hypothetical p... 27 9.4
>U21322-8|AAA62544.1| 662|Caenorhabditis elegans Abnormal
embroygenesis protein 8 protein.
Length = 662
Score = 81.0 bits (191), Expect = 7e-16
Identities = 53/173 (30%), Positives = 85/173 (49%), Gaps = 2/173 (1%)
Frame = +3
Query: 168 LEYRVGDDSNFTFKAGDTIGIIPKNPQVEVDFILNHLSLTSQADLPYTLLLGNKESKIPT 347
+E+ V + S ++AGD + + P N V VD ++N L D + L+ ++++
Sbjct: 295 IEFSV-EGSRIRYEAGDHLAVFPTNDPVLVDRLINMLQF--DPDHAFRLVNVDEDASKRH 351
Query: 348 HVPVKSTLRQVXXXXXXXXXXXXXXXXXAISRYTKEDNERQVLEYLSS--KEGSTAYKTH 521
P +T R AIS Y +D E++ L LS+ +EG Y +
Sbjct: 352 PFPCPTTFRTALSHYVDICAPVKSHVLKAISEYCTDDTEKEFLNKLSTANEEGLKEYARY 411
Query: 522 ILNKQINILDIFTLFPSCKPPIEVLLSYLPKLLPRPYSIVNSYLEDSNAIKIC 680
I+ ++ +I+D+ T +CKPPIE LL LP+L R YSI +S + I IC
Sbjct: 412 IVKERRSIVDVLTDQKTCKPPIEYLLELLPRLQARYYSIASSPRLNEEKIAIC 464
>Z35595-6|CAA84637.1| 682|Caenorhabditis elegans Hypothetical
protein C01G6.6a protein.
Length = 682
Score = 76.2 bits (179), Expect = 2e-14
Identities = 46/153 (30%), Positives = 74/153 (48%), Gaps = 4/153 (2%)
Frame = +3
Query: 204 FKAGDTIGIIPKNPQVEVDFILNHLSLTSQADLPYTLLLGNKESKI----PTHVPVKSTL 371
++ GD I NP +EV+FIL + AD L + K KI P HV +TL
Sbjct: 311 YEPGDAIYFCVPNPALEVNFILKRCGVLDIADQQCELSINPKTEKINAQIPGHVHKITTL 370
Query: 372 RQVXXXXXXXXXXXXXXXXXAISRYTKEDNERQVLEYLSSKEGSTAYKTHILNKQINILD 551
R + ++ T + NE++ L L S +G + + +++ D
Sbjct: 371 RHMFTTCLDIRRAPGRPLIRVLAESTSDPNEKRRLLELCSAQGMKDFTDFVRTPGLSLAD 430
Query: 552 IFTLFPSCKPPIEVLLSYLPKLLPRPYSIVNSY 650
+ FP+ KPP++ L+ LP+L+PRPYS ++SY
Sbjct: 431 MLFAFPNVKPPVDRLIELLPRLIPRPYS-MSSY 462
>AY079165-1|AAL86012.1| 585|Caenorhabditis elegans NADPH-dependent
flavin reductase protein.
Length = 585
Score = 38.7 bits (86), Expect = 0.004
Identities = 37/172 (21%), Positives = 70/172 (40%), Gaps = 5/172 (2%)
Frame = +3
Query: 147 TKVISLKLEYRVGDDSNFTFKAGDTIGIIPKNPQVEVDFILNHLSLT-SQADLPYTLLLG 323
T+++ ++ R + S F+ GD + + P NP+ V + L LT Q P ++
Sbjct: 226 TRLVDFEISDR--NRSKMGFQPGDVLMVRPYNPEETVKIAIEALGLTEEQLKKPLKIVKN 283
Query: 324 NKESKIPTH--VPVKSTLRQVXXXXXXXXXXXXXXXXXAISRYTKEDNERQVLEYLSSKE 497
++ SK P + V K+TL + Y+ E++ L+ L+S E
Sbjct: 284 DRFSKNPPNFLVGTKTTLLTCLQRYFDLQQVPKRSFFEMLGYYSTNPPEKERLQELASPE 343
Query: 498 GSTAYKTHILNKQINILDIFTLFPSCKPPI--EVLLSYLPKLLPRPYSIVNS 647
G Y + + + F + + + L L + PR +SI ++
Sbjct: 344 GLDDYLDYANRSRRTTAEALRDFVATSKNLKPDYLFEILTTIRPRAFSIASA 395
>AL132858-12|CAB60480.1| 585|Caenorhabditis elegans Hypothetical
protein Y113G7A.8 protein.
Length = 585
Score = 38.7 bits (86), Expect = 0.004
Identities = 37/172 (21%), Positives = 70/172 (40%), Gaps = 5/172 (2%)
Frame = +3
Query: 147 TKVISLKLEYRVGDDSNFTFKAGDTIGIIPKNPQVEVDFILNHLSLT-SQADLPYTLLLG 323
T+++ ++ R + S F+ GD + + P NP+ V + L LT Q P ++
Sbjct: 226 TRLVDFEISDR--NRSKMGFQPGDVLMVRPYNPEETVKIAIEALGLTEEQLKKPLKIVKN 283
Query: 324 NKESKIPTH--VPVKSTLRQVXXXXXXXXXXXXXXXXXAISRYTKEDNERQVLEYLSSKE 497
++ SK P + V K+TL + Y+ E++ L+ L+S E
Sbjct: 284 DRFSKNPPNFLVGTKTTLLTCLQRYFDLQQVPKRSFFEMLGYYSTNPPEKERLQELASPE 343
Query: 498 GSTAYKTHILNKQINILDIFTLFPSCKPPI--EVLLSYLPKLLPRPYSIVNS 647
G Y + + + F + + + L L + PR +SI ++
Sbjct: 344 GLDDYLDYANRSRRTTAEALRDFVATSKNLKPDYLFEILTTIRPRAFSIASA 395
>Z35663-2|CAA84735.2| 335|Caenorhabditis elegans Hypothetical
protein T04A8.2 protein.
Length = 335
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = -3
Query: 586 IGGLQDGNSVNISKMFICLFNM*VLYAVDPSLLLKYSSTCLSLSSFVYLDIANR 425
I L G +NI ++ LF +YA S L YS+ C S ++LDI R
Sbjct: 36 IAYLIPGGILNILLLYTILFKNSEIYA-SSSFFLIYSTDCFVSFSMIFLDIIGR 88
>AC006712-1|AAK39323.1| 288|Caenorhabditis elegans Hypothetical
protein Y119C1B.4 protein.
Length = 288
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/44 (34%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Frame = +3
Query: 87 SLRDTLQALPEKTVFTL--PTLTKVISLKLEYRVGDDSNFTFKA 212
+LR+T++ + + V+ L PT+ K+ +LKLE R+ +D ++ A
Sbjct: 124 TLRNTIENIGVEVVYDLYNPTIKKIETLKLEKRLDNDLSYLVDA 167
>U28409-2|AAN60501.1| 288|Caenorhabditis elegans Hypothetical
protein T25D10.5 protein.
Length = 288
Score = 27.9 bits (59), Expect = 7.1
Identities = 21/70 (30%), Positives = 28/70 (40%)
Frame = -3
Query: 394 KQSVNTCLNVDLTGTCVGILLSLFPKSNV*GKSACEVRLKWFKIKSTSTCGFLGMIPIVS 215
K S+ + L C GI +SLF K E LKW ++K G I +
Sbjct: 12 KYSIKSVLGKFCDTNCGGINVSLFVSETTSNKYRFEWELKWDELKKKGVKHLFGTI---T 68
Query: 214 PALKVKLLSS 185
P KL+ S
Sbjct: 69 PETNDKLVPS 78
>Z93384-3|CAB07634.3| 1341|Caenorhabditis elegans Hypothetical protein
H08M01.2b protein.
Length = 1341
Score = 27.5 bits (58), Expect = 9.4
Identities = 24/91 (26%), Positives = 40/91 (43%)
Frame = +3
Query: 75 VVIQSLRDTLQALPEKTVFTLPTLTKVISLKLEYRVGDDSNFTFKAGDTIGIIPKNPQVE 254
V +L+ LPE + PT + K V DD D + I+P + Q
Sbjct: 1217 VAATALKSFFSCLPESLI---PTAYH-LRWKQIMMVSDDIKKIDGIRDALAILPVSNQKV 1272
Query: 255 VDFILNHLSLTSQADLPYTLLLGNKESKIPT 347
+ +++ HL+ S + P T++ N SK+ T
Sbjct: 1273 LQYLVTHLTKVSCS--PKTVMNSNNLSKVWT 1301
>Z93384-2|CAE54901.1| 1320|Caenorhabditis elegans Hypothetical protein
H08M01.2a protein.
Length = 1320
Score = 27.5 bits (58), Expect = 9.4
Identities = 24/91 (26%), Positives = 40/91 (43%)
Frame = +3
Query: 75 VVIQSLRDTLQALPEKTVFTLPTLTKVISLKLEYRVGDDSNFTFKAGDTIGIIPKNPQVE 254
V +L+ LPE + PT + K V DD D + I+P + Q
Sbjct: 1217 VAATALKSFFSCLPESLI---PTAYH-LRWKQIMMVSDDIKKIDGIRDALAILPVSNQKV 1272
Query: 255 VDFILNHLSLTSQADLPYTLLLGNKESKIPT 347
+ +++ HL+ S + P T++ N SK+ T
Sbjct: 1273 LQYLVTHLTKVSCS--PKTVMNSNNLSKVWT 1301
>Z83217-7|CAL69737.1| 223|Caenorhabditis elegans Hypothetical
protein C10C6.7b protein.
Length = 223
Score = 27.5 bits (58), Expect = 9.4
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = +3
Query: 225 GIIPKNPQVEVDFILNHLSLTSQADLPYTLLLGNK---ESKIPTHVPV 359
GI NP + V F+L+ +SL S ADL + + +K + +PT P+
Sbjct: 120 GIRNNNPALIVPFMLSQVSLGSYADLHTYIQMVSKCSSSAPLPTTSPI 167
>Z81484-3|CAB03971.1| 346|Caenorhabditis elegans Hypothetical
protein C47A10.6 protein.
Length = 346
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +2
Query: 56 WSFQKHGSDSISKRYFASTTRKNCIYFTYINE 151
W FQK D++S AS T + YF +N+
Sbjct: 297 WVFQKKHRDTVSNTLQASLTTSSDHYFNVLNQ 328
>Z22179-10|CAD91636.1| 136|Caenorhabditis elegans Hypothetical
protein F58A4.7d protein.
Length = 136
Score = 27.5 bits (58), Expect = 9.4
Identities = 20/57 (35%), Positives = 26/57 (45%)
Frame = -3
Query: 256 TSTCGFLGMIPIVSPALKVKLLSSPTLYSSFKEITFVNVGKVNTVFSGSACKVSLRD 86
TST G M+ S + L SPT + I VGK+ SG C+ S+RD
Sbjct: 79 TSTIGHAPMLANRSLSQPAPL--SPTSLDPDRSIDPECVGKLPIATSGGGCRASMRD 133
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,620,010
Number of Sequences: 27780
Number of extensions: 301431
Number of successful extensions: 861
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 859
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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