Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0329
         (684 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g24520.1 68417.m03515 NADPH-cytochrome p450 reductase, putati...    62   3e-10
At4g30210.2 68417.m04297 NADPH-cytochrome p450 reductase, putati...    58   5e-09
At4g30210.1 68417.m04296 NADPH-cytochrome p450 reductase, putati...    58   5e-09
At3g02280.1 68416.m00209 flavodoxin family protein low similarit...    49   3e-06

>At4g24520.1 68417.m03515 NADPH-cytochrome p450 reductase, putative
           / NADPH-ferrihemoprotein reductase, putative similar to
           NADPH-ferrihemoprotein reductase NADPH-cytochrome P450
           oxydoreductase isoform 1 [Populus balsamifera subsp.
           trichocarpa x Populus deltoides] GI:13183562, SP|P37116
           NADPH-cytochrome P450 reductase (EC 1.6.2.4) (CPR)
           [Vigna radiata] {Phaseolus aureus}
          Length = 692

 Score = 62.1 bits (144), Expect = 3e-10
 Identities = 46/168 (27%), Positives = 79/168 (47%), Gaps = 6/168 (3%)
 Frame = +3

Query: 162 LKLEYRVGDDSNFTFKAGDTIGIIPKNPQVEVDFILNHLSLTSQADLPYTLLLGNK---- 329
           + LE+ +   +  T++ GD +G+  +N  VE+      L L    DL +++    +    
Sbjct: 313 IHLEFDISR-TGITYETGDHVGVYAEN-HVEIVEEAGKL-LGHSLDLVFSIHADKEDGSP 369

Query: 330 -ESKIPTHVPVKSTLRQVXXXXXXXXXXXXXXXXXAISRYTKEDNERQVLEYLSSKEGST 506
            ES +P   P   TL                    A++ Y  E +E + L++L+S +G  
Sbjct: 370 LESAVPPPFPGPCTLGTGLARYADLLNPPRKSALVALAAYATEPSEAEKLKHLTSPDGKD 429

Query: 507 AYKTHILNKQINILDIFTLFPSCKPPIEVLLSYL-PKLLPRPYSIVNS 647
            Y   I+  Q ++L++   FPS KPP+ V  + + P+L PR YSI +S
Sbjct: 430 EYSQWIVASQRSLLEVMAAFPSAKPPLGVFFAAIAPRLQPRYYSISSS 477


>At4g30210.2 68417.m04297 NADPH-cytochrome p450 reductase, putative
           / NADPH-ferrihemoprotein reductase, putative similar to
           NADPH-cytochrome P450 oxydoreductase from [Populus
           balsamifera subsp. trichocarpa x Populus deltoides]
           GI:13183564, GI:13183566
          Length = 711

 Score = 58.0 bits (134), Expect = 5e-09
 Identities = 45/169 (26%), Positives = 74/169 (43%), Gaps = 7/169 (4%)
 Frame = +3

Query: 162 LKLEYRVGDDSNFTFKAGDTIGIIPKNPQVEVDFILNHLSLTSQADLPYTLLLGNKE--- 332
           + LE+ +   S  T++ GD +G++  N    VD  L  L ++      Y  L   KE   
Sbjct: 333 IHLEFDIAG-SGLTYETGDHVGVLCDNLSETVDEALRLLDMSPDT---YFSLHAEKEDGT 388

Query: 333 ---SKIPTHVPVKSTLRQVXXXXXXXXXXXXXXXXXAISRYTKEDNERQVLEYLSSKEGS 503
              S +P   P    LR                   A++ +  +  E + L++L+S  G 
Sbjct: 389 PISSSLPPPFP-PCNLRTALTRYACLLSSPKKSALVALAAHASDPTEAERLKHLASPAGK 447

Query: 504 TAYKTHILNKQINILDIFTLFPSCKPPIEVLLS-YLPKLLPRPYSIVNS 647
             Y   ++  Q ++L++   FPS KPP+ V  +   P+L PR YSI +S
Sbjct: 448 DEYSKWVVESQRSLLEVMAEFPSAKPPLGVFFAGVAPRLQPRFYSISSS 496


>At4g30210.1 68417.m04296 NADPH-cytochrome p450 reductase, putative
           / NADPH-ferrihemoprotein reductase, putative similar to
           NADPH-cytochrome P450 oxydoreductase from [Populus
           balsamifera subsp. trichocarpa x Populus deltoides]
           GI:13183564, GI:13183566
          Length = 726

 Score = 58.0 bits (134), Expect = 5e-09
 Identities = 45/169 (26%), Positives = 74/169 (43%), Gaps = 7/169 (4%)
 Frame = +3

Query: 162 LKLEYRVGDDSNFTFKAGDTIGIIPKNPQVEVDFILNHLSLTSQADLPYTLLLGNKE--- 332
           + LE+ +   S  T++ GD +G++  N    VD  L  L ++      Y  L   KE   
Sbjct: 333 IHLEFDIAG-SGLTYETGDHVGVLCDNLSETVDEALRLLDMSPDT---YFSLHAEKEDGT 388

Query: 333 ---SKIPTHVPVKSTLRQVXXXXXXXXXXXXXXXXXAISRYTKEDNERQVLEYLSSKEGS 503
              S +P   P    LR                   A++ +  +  E + L++L+S  G 
Sbjct: 389 PISSSLPPPFP-PCNLRTALTRYACLLSSPKKSALVALAAHASDPTEAERLKHLASPAGK 447

Query: 504 TAYKTHILNKQINILDIFTLFPSCKPPIEVLLS-YLPKLLPRPYSIVNS 647
             Y   ++  Q ++L++   FPS KPP+ V  +   P+L PR YSI +S
Sbjct: 448 DEYSKWVVESQRSLLEVMAEFPSAKPPLGVFFAGVAPRLQPRFYSISSS 496


>At3g02280.1 68416.m00209 flavodoxin family protein low similarity
           to SP|Q05001 NADPH-cytochrome P450 reductase (EC
           1.6.2.4) {Catharanthus roseus}, similar to
           NADPH-dependent FMN and FAD containing oxidoreductase
           [Homo sapiens] GI:6694369; contains Pfam profiles
           PF00258: flavodoxin, PF00667: FAD binding domain,
           PF00175: Oxidoreductase NAD-binding domain
          Length = 623

 Score = 49.2 bits (112), Expect = 3e-06
 Identities = 36/165 (21%), Positives = 71/165 (43%), Gaps = 3/165 (1%)
 Frame = +3

Query: 192 SNFTFKAGDTIGIIPKNPQVEVDFILNHLSLTSQADL---PYTLLLGNKESKIPTHVPVK 362
           S   ++ GD + ++P      VD  +    L  ++ +   P      +   ++ T +P+K
Sbjct: 253 STIEYEVGDVVELLPSQNSSVVDAFIERCGLDPESFITVGPRETENSSFSEEMITQIPIK 312

Query: 363 STLRQVXXXXXXXXXXXXXXXXXAISRYTKEDNERQVLEYLSSKEGSTAYKTHILNKQIN 542
                V                  +S Y   ++E++ L+Y +S EG      +   ++ +
Sbjct: 313 LKTF-VELTMDVTSASPRRYFFEIMSFYATAEHEKERLQYFASPEGRDDLYNYNQKERRS 371

Query: 543 ILDIFTLFPSCKPPIEVLLSYLPKLLPRPYSIVNSYLEDSNAIKI 677
           IL++   FPS + P + L+  +P L PR +SI +S L    A+ +
Sbjct: 372 ILEVLEDFPSVQIPFDWLVQLVPPLKPRAFSISSSPLAHPAAVHL 416


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,503,896
Number of Sequences: 28952
Number of extensions: 270599
Number of successful extensions: 645
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 642
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1447936096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)