Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0324
         (601 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    26   1.1  
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    26   1.1  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    25   1.4  
Z69977-1|CAA93817.1|  151|Anopheles gambiae ribosomal protein RS...    25   1.9  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    25   2.5  
Z69979-1|CAA93819.1|  127|Anopheles gambiae vacuolar ATPase prot...    24   3.3  
AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein p...    23   5.7  
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    23   7.5  

>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
 Frame = +3

Query: 297 WNTSAHS--TDGDSEFSRRSNESDKEVSSTQGKHNRRLQSH*PPHAALSIRDDFS 455
           W+ S+ S  T   SE +  +       SST   H+  + S  PP + +S R  F+
Sbjct: 492 WSASSESGRTSIGSEITTTNTHPKSSASSTSLNHSNPISSSAPPSSIVSRRRFFN 546


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
 Frame = +3

Query: 297 WNTSAHS--TDGDSEFSRRSNESDKEVSSTQGKHNRRLQSH*PPHAALSIRDDFS 455
           W+ S+ S  T   SE +  +       SST   H+  + S  PP + +S R  F+
Sbjct: 493 WSASSESGRTSIGSEITTTNTHPKSSASSTSLNHSNPISSSAPPSSIVSRRRFFN 547


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 12/50 (24%), Positives = 23/50 (46%)
 Frame = +1

Query: 325 ETPNFPEGPMSQTKKFQALKENIIAGSNPISHRMLLFPSVMIFPELFCVL 474
           +TP FP+          ALK  I        +R++    +++F E++ +L
Sbjct: 303 DTPEFPDKRREYKLARNALKREIKRTKKATWYRLVNMSDIILFGEVYVIL 352


>Z69977-1|CAA93817.1|  151|Anopheles gambiae ribosomal protein RS11
           protein.
          Length = 151

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = +1

Query: 349 PMSQTKKFQALKENIIAGS 405
           P+S+T +F  LKE+ +AGS
Sbjct: 126 PLSKTVRFNVLKESKMAGS 144


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +3

Query: 303 TSAHSTDGDSEFSRRSNESDKEVSSTQGKHNRR 401
           +  H TDG  EF +RS + ++E+     + +RR
Sbjct: 383 SGTHGTDGGGEF-QRSYDDEEEIDRKLRQDHRR 414


>Z69979-1|CAA93819.1|  127|Anopheles gambiae vacuolar ATPase
           protein.
          Length = 127

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 10/34 (29%), Positives = 13/34 (38%)
 Frame = -2

Query: 279 IINHRLASFFVHTVSDQLARLVVEEEATSSGHPY 178
           +IN   A    H +    A    + E  S  HPY
Sbjct: 69  VINQNYAELIRHVIDSHTAPTPADVEIPSKDHPY 102


>AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein
           protein.
          Length = 298

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +3

Query: 423 HAALSIRDDFSGALLCSAPHSRGVSTCEV 509
           H A++  +D    LLC  PH    ++C V
Sbjct: 266 HKAVNCTNDVK-CLLCGGPHRIAAASCAV 293


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -1

Query: 478 GAEHRRAPEKSSRMERAACGG 416
           G+E  +A + SS ++ AACGG
Sbjct: 504 GSEGHKARDCSSYVKCAACGG 524


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 616,535
Number of Sequences: 2352
Number of extensions: 13147
Number of successful extensions: 76
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 76
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58029966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)