Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0324
         (601 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC012225-1|AAH12225.1|  543|Homo sapiens NO145 protein protein.        35   0.19 
AM293674-1|CAL25570.1|  812|Homo sapiens 145 kDa nucleolar prote...    35   0.19 
AL357497-2|CAI16226.1|  812|Homo sapiens novel protein similar t...    35   0.19 
AL121955-1|CAI22075.1|  812|Homo sapiens novel protein similar t...    35   0.19 
AL589763-5|CAH72047.1|  126|Homo sapiens novel protein protein.        32   1.8  
AL356512-4|CAH70645.1|  126|Homo sapiens novel protein protein.        32   1.8  

>BC012225-1|AAH12225.1|  543|Homo sapiens NO145 protein protein.
          Length = 543

 Score = 35.1 bits (77), Expect = 0.19
 Identities = 16/63 (25%), Positives = 33/63 (52%)
 Frame = +1

Query: 229 LVTYGVNEETGEPMVNNPTVSFFGTPRPIPPMETPNFPEGPMSQTKKFQALKENIIAGSN 408
           L+T  +N+++  P++  P        +P+PP   P+FP+ P S  +K    + N  + ++
Sbjct: 189 LITLHLNDQSEPPVIGEPASD--SHLQPVPPFGVPDFPQQPKSHYRKHLFSESNQDSSTS 246

Query: 409 PIS 417
            +S
Sbjct: 247 ELS 249


>AM293674-1|CAL25570.1|  812|Homo sapiens 145 kDa nucleolar protein
           protein.
          Length = 812

 Score = 35.1 bits (77), Expect = 0.19
 Identities = 16/63 (25%), Positives = 33/63 (52%)
 Frame = +1

Query: 229 LVTYGVNEETGEPMVNNPTVSFFGTPRPIPPMETPNFPEGPMSQTKKFQALKENIIAGSN 408
           L+T  +N+++  P++  P        +P+PP   P+FP+ P S  +K    + N  + ++
Sbjct: 458 LITLHLNDQSEPPVIGEPASD--SHLQPVPPFGVPDFPQQPKSHYRKHLFSESNQDSSTS 515

Query: 409 PIS 417
            +S
Sbjct: 516 ELS 518


>AL357497-2|CAI16226.1|  812|Homo sapiens novel protein similar to
           synaptonemal complex protein 2 (SYCP2) protein.
          Length = 812

 Score = 35.1 bits (77), Expect = 0.19
 Identities = 16/63 (25%), Positives = 33/63 (52%)
 Frame = +1

Query: 229 LVTYGVNEETGEPMVNNPTVSFFGTPRPIPPMETPNFPEGPMSQTKKFQALKENIIAGSN 408
           L+T  +N+++  P++  P        +P+PP   P+FP+ P S  +K    + N  + ++
Sbjct: 458 LITLHLNDQSEPPVIGEPASD--SHLQPVPPFGVPDFPQQPKSHYRKHLFSESNQDSSTS 515

Query: 409 PIS 417
            +S
Sbjct: 516 ELS 518


>AL121955-1|CAI22075.1|  812|Homo sapiens novel protein similar to
           synaptonemal complex protein 2 (SYCP2) protein.
          Length = 812

 Score = 35.1 bits (77), Expect = 0.19
 Identities = 16/63 (25%), Positives = 33/63 (52%)
 Frame = +1

Query: 229 LVTYGVNEETGEPMVNNPTVSFFGTPRPIPPMETPNFPEGPMSQTKKFQALKENIIAGSN 408
           L+T  +N+++  P++  P        +P+PP   P+FP+ P S  +K    + N  + ++
Sbjct: 458 LITLHLNDQSEPPVIGEPASD--SHLQPVPPFGVPDFPQQPKSHYRKHLFSESNQDSSTS 515

Query: 409 PIS 417
            +S
Sbjct: 516 ELS 518


>AL589763-5|CAH72047.1|  126|Homo sapiens novel protein protein.
          Length = 126

 Score = 31.9 bits (69), Expect = 1.8
 Identities = 18/61 (29%), Positives = 32/61 (52%)
 Frame = +1

Query: 82  VQFHCFVSVISECTSAQKYQKLHSFLDWTALQIRMATARGFFFDDETGELVTYGVNEETG 261
           ++F  F+ V++E    +KY+ +   +   A ++  +  RGF   D   EL+ Y   EETG
Sbjct: 62  IRFEKFLPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKD---ELIKYMTEEETG 118

Query: 262 E 264
           +
Sbjct: 119 K 119


>AL356512-4|CAH70645.1|  126|Homo sapiens novel protein protein.
          Length = 126

 Score = 31.9 bits (69), Expect = 1.8
 Identities = 18/61 (29%), Positives = 32/61 (52%)
 Frame = +1

Query: 82  VQFHCFVSVISECTSAQKYQKLHSFLDWTALQIRMATARGFFFDDETGELVTYGVNEETG 261
           ++F  F+ V++E    +KY+ +   +   A ++  +  RGF   D   EL+ Y   EETG
Sbjct: 62  IRFEKFLPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKD---ELIKYMTEEETG 118

Query: 262 E 264
           +
Sbjct: 119 K 119


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,499,596
Number of Sequences: 237096
Number of extensions: 1873901
Number of successful extensions: 5448
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5446
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6297951520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)