Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0323
         (650 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    30   0.014
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.2  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    23   2.9  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   3.8  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    22   5.0  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    22   5.0  

>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 30.3 bits (65), Expect = 0.014
 Identities = 26/117 (22%), Positives = 46/117 (39%)
 Frame = +1

Query: 187 VDMNAINPTLHKYNTAHLRGKHDVINYDNSSKNQKEHQRFWTLPKRTAETNQLRPTSSNL 366
           VD+  + P   + N A    K     Y +  + +KE+ + W   +   + + +       
Sbjct: 58  VDLKRVLPEALQTNCAKCTEKQRTAAYRSIKRLKKEYPKIWEQLRAVWDPDDVFIRKFET 117

Query: 367 NQDPGQLSAGNSIKISPIDPRASRSFKSSTPSNKENVVDLSCKLLSPVKSTMTNEEL 537
           + + G+ S   S   SP  P  S  F  +  ++  + V +S   L P  ST T   L
Sbjct: 118 SFESGKPSGVISTNTSPPSPILSNRFGENEEADAASNV-ISSTPLPPTTSTTTRTTL 173


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 12/43 (27%), Positives = 20/43 (46%)
 Frame = -1

Query: 245 PRRCAVLYLCSVGLIAFISTVGPSLCTRLCGIFKQALSALECR 117
           P+ CA  Y+C  GL   +S     +   + G  + +L   +CR
Sbjct: 569 PKNCAAYYVCRSGLSYHLSCAENMMFDPMSGKCEYSLGE-KCR 610


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +3

Query: 81  DQKELREAIAGLSTFQC*QSLFEYSAQSS 167
           D   LRE + G  TF+C   L  + A SS
Sbjct: 31  DNPSLREGLKGARTFRCVFVLDPWFAGSS 59


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +1

Query: 166 VQSEGPTVDMNAINPTLHKY 225
           V + GP+VD++   P+L KY
Sbjct: 183 VAAAGPSVDLSYHVPSLSKY 202


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = +1

Query: 445 KSSTPSNKENVVDLSCKLLSPVKS 516
           K  +PS+   ++D+ CK+     S
Sbjct: 23  KPQSPSSSSRILDIPCKVCGDFSS 46


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = +1

Query: 445 KSSTPSNKENVVDLSCKLLSPVKS 516
           K  +PS+   ++D+ CK+     S
Sbjct: 23  KPQSPSSSSRILDIPCKVCGDFSS 46


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.311    0.128    0.366 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,318
Number of Sequences: 336
Number of extensions: 2763
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)