Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0323
(650 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1919.11 |mug137||BAR adaptor protein|Schizosaccharomyces pom... 31 0.19
SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|... 29 0.44
SPBC19G7.06 |mbx1||MADS-box transcription factor Mbx1|Schizosacc... 29 0.58
SPBC30D10.15 |||snoRNP assembly factor |Schizosaccharomyces pomb... 29 0.58
SPAC9G1.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 29 0.58
SPBC21.03c |||DUF55 family protein|Schizosaccharomyces pombe|chr... 28 1.3
SPAC824.02 |||GPI inositol deacylase|Schizosaccharomyces pombe|c... 28 1.3
SPAC2G11.03c |vps45||vacuolar sorting protein Vps 45|Schizosacch... 28 1.3
SPAC30C2.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 1.8
SPAPB1A10.09 |ase1||microtubule-associated protein Ase1 |Schizos... 27 2.3
SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces pomb... 27 2.3
SPBC947.02 |apl2||AP-1 adaptor complex subunit Apl2 |Schizosacch... 27 2.3
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 26 4.1
SPAC6B12.08 |mug185||DNAJ domain protein Jjj family|Schizosaccha... 26 5.4
SPAC31A2.09c |apm4||AP-2 adaptor complex subunit Apm4 |Schizosac... 25 7.2
SPCC31H12.06 |mug111||sequence orphan|Schizosaccharomyces pombe|... 25 9.5
SPAC1D4.06c |csk1||cyclin-dependent kinase activating kinase Csk... 25 9.5
>SPCC1919.11 |mug137||BAR adaptor protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 420
Score = 30.7 bits (66), Expect = 0.19
Identities = 16/63 (25%), Positives = 31/63 (49%)
Frame = +1
Query: 388 SAGNSIKISPIDPRASRSFKSSTPSNKENVVDLSCKLLSPVKSTMTNEELYAVIHKSKKK 567
S N SP+DP S+ F +T + K + S K T+ + +Y+ +++K+
Sbjct: 238 SVENEFLASPMDPSLSKLFTKTTNTEKISPTPFSTPKRKSKKETVFVKAIYSFTGRNEKE 297
Query: 568 LNI 576
L++
Sbjct: 298 LDL 300
>SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1184
Score = 29.5 bits (63), Expect = 0.44
Identities = 30/130 (23%), Positives = 56/130 (43%), Gaps = 2/130 (1%)
Frame = +1
Query: 31 LGRESHGVKDETPFRALIRKSLERL*L-DYRHSSADKACLNIPHNLVQSEGPTVDM-NAI 204
LGR G DE + R S+ER+ DY H + L +SE V++ +
Sbjct: 862 LGRNGFGDVDEQDATEVYRHSIERIVPGDYLHDEKTRDTLTRESPAFRSEEAVVEVADED 921
Query: 205 NPTLHKYNTAHLRGKHDVINYDNSSKNQKEHQRFWTLPKRTAETNQLRPTSSNLNQDPGQ 384
+P + AH + ++S ++Q H + E N +R T++ +++D Q
Sbjct: 922 HPHASEAERAHSYSNRKQASSESSPESQSTHYNDY----EGTEDNIVRQTTT-VDEDGHQ 976
Query: 385 LSAGNSIKIS 414
++ K++
Sbjct: 977 EQTTSTTKVA 986
>SPBC19G7.06 |mbx1||MADS-box transcription factor
Mbx1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 436
Score = 29.1 bits (62), Expect = 0.58
Identities = 16/65 (24%), Positives = 29/65 (44%)
Frame = +1
Query: 193 MNAINPTLHKYNTAHLRGKHDVINYDNSSKNQKEHQRFWTLPKRTAETNQLRPTSSNLNQ 372
+N I P N + ++ ++DN + EH +F LP +T++L S +
Sbjct: 292 INQITPPFLPDNLGQ-ENRGELYSHDNPTSMVYEHPKFDELPNGFIDTHELNILSRSFTA 350
Query: 373 DPGQL 387
P Q+
Sbjct: 351 SPNQI 355
>SPBC30D10.15 |||snoRNP assembly factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 516
Score = 29.1 bits (62), Expect = 0.58
Identities = 21/62 (33%), Positives = 33/62 (53%)
Frame = +1
Query: 460 SNKENVVDLSCKLLSPVKSTMTNEELYAVIHKSKKKLNIKDAPERAESPALSNISLSPVS 639
+N ++ V S LL P + ++NEE+ S +K N+K A E AE SN S+ S
Sbjct: 126 ANPKDCVVPSSGLLMPKEEFISNEEVGIPATNSSEKSNVKIADEIAE-VTHSNSSIGKSS 184
Query: 640 SE 645
++
Sbjct: 185 AD 186
>SPAC9G1.07 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 418
Score = 29.1 bits (62), Expect = 0.58
Identities = 49/207 (23%), Positives = 81/207 (39%), Gaps = 11/207 (5%)
Frame = +1
Query: 61 ETPFRALIRKSLERL*LDYRHSSADKACLNIPHNLVQSEGPTVDMNAINPTLHKYNTAHL 240
ET FR LIR L L L E V N + L ++TA+
Sbjct: 95 ETNFRQLIRLGYNEKSLGELKQGTISRLLKEHMTLWNQERSNV--NRKSNVLFCWSTAYQ 152
Query: 241 RGKHDVINYDNSSKNQKEHQRFWTLPKRTAETNQLRPTSSNLNQDPGQLSAGN-SIKISP 417
+ K +Y NS + + LP+++ +N S++N L N S P
Sbjct: 153 KQKRKTASYTNSPVTPPINDKNILLPEQSPLSNFSTTKISSINVPSDILDFSNLSSNEIP 212
Query: 418 IDPRASRSFKSSTPSNK-ENVVDLSCKLLSPVK---------STMTNEELYAVIHKSKKK 567
D +S + ++T + K ++ + + L SPVK ST++ + V+ KS
Sbjct: 213 KDYSSSTALLNNTVAVKQDHKLSANTFLSSPVKLIERESNSCSTISINKEDEVVPKSPLS 272
Query: 568 LNIKDAPERAESPALSNISLSPVSSET 648
L+ K E E +++ + ET
Sbjct: 273 LDRKKVDEVEEHSSIAKLDSEEKIRET 299
>SPBC21.03c |||DUF55 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 239
Score = 27.9 bits (59), Expect = 1.3
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Frame = +1
Query: 397 NSIKISPIDPRASRSFKSSTPSNKENVVDLSCKLLSP---VKSTMTNEELYAVIHKSKKK 567
N +K + R+ S P + + +LS K P +K+ + EE A K K+K
Sbjct: 141 NQLKSMELLNRSRLSISRVKPEEWKFIHELS-KQPEPEEIIKARLQEEEKVA---KRKRK 196
Query: 568 LNIKDAPERAESPALSNISLSPVS 639
LN+ D +A+SP S+IS + S
Sbjct: 197 LNLSDGENKAKSP-YSSISENDAS 219
>SPAC824.02 |||GPI inositol deacylase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1142
Score = 27.9 bits (59), Expect = 1.3
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = -1
Query: 290 FWFLEELS*LMTSCLPRRCAVLYLCSVGLIAFI 192
FWFL L LM L +V+ LC + L+AFI
Sbjct: 843 FWFLAPLLTLMFVGLVITASVIILCVMHLLAFI 875
>SPAC2G11.03c |vps45||vacuolar sorting protein Vps
45|Schizosaccharomyces pombe|chr 1|||Manual
Length = 558
Score = 27.9 bits (59), Expect = 1.3
Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +1
Query: 88 KSLERL*LDYRHSSADKACLNIPHNLVQSEGPTVDMNAINPTLHKYNTAHLR-GKHDVIN 264
KS++ LDY + D A NIPH + S D A + T + L K VI
Sbjct: 118 KSIQEFFLDYLVVNNDLASFNIPHIIEDSPDNWQD-GAFHRTHQGIISLLLSLKKKPVIR 176
Query: 265 YDNSS 279
YDN+S
Sbjct: 177 YDNNS 181
>SPAC30C2.07 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 27.5 bits (58), Expect = 1.8
Identities = 16/67 (23%), Positives = 36/67 (53%)
Frame = +1
Query: 334 TNQLRPTSSNLNQDPGQLSAGNSIKISPIDPRASRSFKSSTPSNKENVVDLSCKLLSPVK 513
T+ +SSN ++DP + ++ ++ + + D +SF S + EN +LS +
Sbjct: 137 TSLFENSSSNFSEDPNKPNSSDAFESNKEDSPLLKSFNDS--AIPENAANLSSSSKNMKD 194
Query: 514 STMTNEE 534
ST+++++
Sbjct: 195 STLSSQK 201
>SPAPB1A10.09 |ase1||microtubule-associated protein Ase1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 731
Score = 27.1 bits (57), Expect = 2.3
Identities = 21/97 (21%), Positives = 45/97 (46%), Gaps = 2/97 (2%)
Frame = +1
Query: 352 TSSNLNQDPGQLSAGNSIKISPIDPRASRS-FKSSTPSNKENVVDLSCKLLSPVKSTMTN 528
+++ N+ P +S + P SR+ ++ + ++ +NV LSP K + N
Sbjct: 595 SNTPFNKFPNSVSRNTHFESKSPHPNYSRTPHETYSKASSKNVP------LSPPKQRVVN 648
Query: 529 EELYAVIHKSKKKLNIKD-APERAESPALSNISLSPV 636
E ++ + ++ N+K+ PE + N+ SP+
Sbjct: 649 EHALNIMSEKLQRTNLKEQTPEMDIENSSQNLPFSPM 685
>SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1334
Score = 27.1 bits (57), Expect = 2.3
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +1
Query: 418 IDPRASRSFKSSTPSNKENVVDLSCKLLSPVKSTMTNEELYAVIHKSKKKLNIKDA-PER 594
++P A RSF S+ ++ + L S T N E + +HK+K++ I A R
Sbjct: 361 VEPTA-RSFTLSSYKSRASGNSLINDRSSTTTPTFVNSEASSPVHKNKRRRRIYAALLSR 419
Query: 595 AESPALSNISLSPVSSE 645
S L + L ++ +
Sbjct: 420 VASELLDRLQLGDITKD 436
>SPBC947.02 |apl2||AP-1 adaptor complex subunit Apl2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 683
Score = 27.1 bits (57), Expect = 2.3
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +1
Query: 421 DPRASRSFKSSTPSNKENVVDLSCKLLSPVKSTMTNEEL 537
DPRA RS + +V+ S KLLS + STM +E+L
Sbjct: 443 DPRA-RSSMAWILGEFSHVIPTSSKLLSEMISTMADEDL 480
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 26.2 bits (55), Expect = 4.1
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +1
Query: 328 AETNQLRPTSSNLNQDPGQLSAGNSIKISPIDPRASRSFKSSTPSNKE 471
AE T N+ PG +SA IK++ A ++ + P+N+E
Sbjct: 519 AEYRDTPDTPRNIMPLPGLMSADQPIKVTEPSNDADKAIVAEGPNNEE 566
>SPAC6B12.08 |mug185||DNAJ domain protein Jjj
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 380
Score = 25.8 bits (54), Expect = 5.4
Identities = 17/77 (22%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +1
Query: 205 NPTLHKYNTAHLRGKHDVINYDNSSKNQKEHQRFWTLPKRTAETNQLRPTSSNLNQD-PG 381
NP + + R ++ + N++NS K++K ++ K+ A+ Q S+ +D P
Sbjct: 268 NPIMCMVCNKNFRSQNQLENHENSKKHKKNLRKMNQEIKKHAKEAQKNAESNKQPEDAPS 327
Query: 382 QLSAGNSIKISPIDPRA 432
+ N + S R+
Sbjct: 328 ESPYSNKVSSSDFYTRS 344
>SPAC31A2.09c |apm4||AP-2 adaptor complex subunit Apm4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 446
Score = 25.4 bits (53), Expect = 7.2
Identities = 25/109 (22%), Positives = 48/109 (44%), Gaps = 6/109 (5%)
Frame = +1
Query: 112 DYRH--SSADKACLNIPHNLVQSEGPTVDMNAI----NPTLHKYNTAHLRGKHDVINYDN 273
DY H SS+ + +P N+V++ P V+ + + + G+ ++I Y
Sbjct: 323 DYPHKLSSSLNFRIPVPTNVVKAN-PRVNRGKAGYEPSENIINWKIPRFLGETELIFYAE 381
Query: 274 SSKNQKEHQRFWTLPKRTAETNQLRPTSSNLNQDPGQLSAGNSIKISPI 420
+ +Q+ W P + + N L TSS L+ ++S ++ K I
Sbjct: 382 VELSNTTNQQIWAKPPISLDFNILMFTSSGLHVQYLRVSEPSNSKYKSI 430
>SPCC31H12.06 |mug111||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 468
Score = 25.0 bits (52), Expect = 9.5
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -1
Query: 290 FWFLEELS*LMTSCLPRRCAVLYLCSVGLIAFISTVGPSL 171
F+F LS L P CA + S+ + IS GPSL
Sbjct: 102 FFFASTLSILYMDDFPT-CAYFVIFSISFLLGISGTGPSL 140
>SPAC1D4.06c |csk1||cyclin-dependent kinase activating kinase Csk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 306
Score = 25.0 bits (52), Expect = 9.5
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +1
Query: 439 SFKSSTPSN--KENVVDLSCKLLSPVKSTMTNEELYAVIHKSKKKLNI 576
SFKS S+ E +D CK++ + S + E + ++H+ NI
Sbjct: 88 SFKSFVLSDVMDEISIDTKCKIVLQISSALEYLEKHGILHRDIHPNNI 135
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.311 0.128 0.366
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,465,398
Number of Sequences: 5004
Number of extensions: 49436
Number of successful extensions: 123
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 123
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 293780908
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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